Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is glgP [H]

Identifier: 74318074

GI number: 74318074

Start: 2142645

End: 2145158

Strand: Reverse

Name: glgP [H]

Synonym: Tbd_2056

Alternate gene names: 74318074

Gene position: 2145158-2142645 (Counterclockwise)

Preceding gene: 74318075

Following gene: 74318061

Centisome position: 73.72

GC content: 65.99

Gene sequence:

>2514_bases
ATGTCTGAGCCGAATGCCGATTTCGTTCCCCTGCTCGCGCTCGAGCCGCTGCCGACGAGCGGCCGGGTCCTCACGCAGGA
CCTCGAGCGCTACCAGTTCTACCATCTCGGGCGCCTGCCCTCCTGTCCGCCGATCTACACCTACAAGGCGCTCGCCTGGG
CGCTGCGCGACCGCCTGATGTCGGACTGGATGAACACCTACACGACCCGCGACCGGCCGGGCCGGCGCCGCGCCTACTAT
CTATCGCTCGAGTTCCTGATCGGGCGCGCACTCGCCAATCACGTGCTCAACCTCGGGCTCGACGCGGAATCGCGCGAGGC
CCTGCACAACTTCGGCCAGACCCTCGAGGACATCGCCGAACTCGAGCCCGACGCCGGACTCGGTAACGGCGGCCTCGGAC
GGCTCGCGGCCTGCTTCATGGACAGCTGCGCGACGCTCAACCTGCCGGTCATGGGCTACGGCCTGCACTACCAGTACGGC
ATGTTCCACCAGCACATCGAAAACGGCTACCAGGTCGAGGATCCCGACAACTGGCTGCGCGACGGCAACCCCTGGGAAGT
CGAGCGCTCCGAATTCACCTGCCGCGTCCAGTTCGGCGGCCACACCGAGCACTATCACGACAAGGCCGGCATCCACCGCG
CGCGCTGGGCCGATACCAGCGACGTGCTCGCGGTGCCGTTCGACATGCCGATCTCGGGCTACCGCAACCGCGTCGTCAAC
ACGCTGCGGCTGTGGAAGGCGGCGGCAACCGACGCTTTCGACCTCGACGAATTCAACGCCGGCAGTTATTCGGAAGCCGT
CGCGGCGAAGAACCTCGCCGAGCACATCTCGATGGTGCTCTACCCGAACGACGCGAGCGAGAACGGCAAGGAGCTGCGCC
TGCGTCAGCAATATTTCCTCGCGTCGGCGAGCCTGCAGGACGCGCTGCGGCAGTGGCGCGTCGCAGGCAACAGCGATTTA
TCGAAGTTCGCGGAACACAACGTGTTCCAGATGAACGACACCCACCCGACGATCGCGGTCGCCGAGCTGATGCGTCTGCT
GCTCGACATCATGGGCATGCAGTGGGACGAGGCCTGGGCGATCACCTCGCAGTGCATGGCCTACACCAACCATACGCTCC
TGCCCGAAGCGCTCGAGCGCTGGCCGGTCGAGCTGTTCGAGCGGCTGCTTCCGCGCCCGCTCGAGATCATCTACGAGATC
AACGCGCGCTTCCTGCGCGAGGTCGCGGTCAAGTGGCCCGGCGACATGGAGCGCCGCCGGCGCATGTCGATCATCGAAGA
GGAACCGGTGCGGCAGGTGCGCATGGCCTGGCTCGCGATCGTCGGCAGCTTCTCGGTCAACGGCGTCGCCGCGCTGCACT
CGCGCCTGCTGCAGGAGGGGCTGTTCCGCGACTTCGTCGAGCTGTGGCCCGACAAGTTCAACAACAAGACCAACGGTGTC
ACGCCGCGCCGCTGGCTCGCCCACGCCAACCCGGGGCTCGGCAAGCTCGTCAGCGCGCGCATCGGCGAGGGCTGGATCGC
CGAGCTCGCGCAGCTTGAGAAGCTCAAGGCCGCGGCCGACGAGCCCGCGCTGCAGGCCGAGTGGCGGGCCGTCAAGCGTG
CCAACAAGGAACGGCTCGCGGCGCTCGTCAAGGCCGAGTGCGGCGTCGATTTCAATCCCGACGCGCTGTTTGACGTCCAG
GTCAAGCGCATCCACGAATACAAGCGCCAGCTCCTCAACGTGCTGCACATCGTCCACCTGTACAACCGGCTCAACCATGG
GGAGCTCGACGGCTGGGCCGACCGCTGCGTGCTGATCGGCGGCAAGGCCGCGCCGGGCTACGCCATGGCCAAGCGCATCA
TCAAGCTCGTCAACAGCGTCGCCGAGGTCGTCAACAGCGATCCCGACATCAATGGCCGCCTCCACGTCGCCTTCCTGCCC
AACTACCGTGTCAGCAGCATGGAAATCATCGCCCCGGCGACCGATCTGTCGGAGCAGATTTCCACCGCCGGCAAGGAGGC
CTCGGGCACCGGCAACATGAAGTTCATGATGAACGGCGCGGTGACGATCGGCACCTACGACGGCGCGAACATCGAGATCC
TCGAAGCGGTCGGCGCCGAGAATTTCTTCCTGTTCGGCCTGCGTGCCGACGAGGTCGAGGCCCTGCGTCCGCACTATCAG
CCGCAGGCCTACGTCGACAAGGATCCCGCGCTGCGCGCCGTCATCGACCTGCTCGCGTCGGGTCACTTCAACCTGTGCGA
GCCCGGCATCTTCGACGACATCGTCGATGCGCTGCTGAGTCCGCAGGACCCTTGGATGGTGCTCGCTGATTTCCGTAGCT
ACGTCGACGCGCAGGAACGCGTCGCGCAGGCCTGGCAGGATCCGGCGCGCTGGGCGCGGATGAGCATTCTCAATACGGCG
TCGAGCGGATTTTTCTCGACCGACCGCACGATGCAGGAATACAACGCGGATATCTGGAAGCTGAAGCCGTTCGCGGCGGA
AGGGCGGCACGCGAGCGCCGGCACCGCCGTATAA

Upstream 100 bases:

>100_bases
CGCCGCGTGCAGCAGACCGGAATGCGCCTGTCCTTCGACTGGCGGGAAAGCGCCGGCCACTACCTCGCGCTCTACGCGGC
CGATTCCGCCGGAGAACCCG

Downstream 100 bases:

>100_bases
GTCCTAGGCAGCCTGGACCGGGATCGTCTGGCGCGTGTCGACGATGGCGTTGGCGGCGTCGACGTAGACGAGTTCGGGCG
CGTAGCGCGCCATCTCGAGT

Product: phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 837; Mature: 836

Protein sequence:

>837_residues
MSEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLMSDWMNTYTTRDRPGRRRAYY
LSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAELEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYG
MFHQHIENGYQVEDPDNWLRDGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN
TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFLASASLQDALRQWRVAGNSDL
SKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWAITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEI
NARFLREVAVKWPGDMERRRRMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV
TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLAALVKAECGVDFNPDALFDVQ
VKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIGGKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLP
NYRVSSMEIIAPATDLSEQISTAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ
PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQERVAQAWQDPARWARMSILNTA
SSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV

Sequences:

>Translated_837_residues
MSEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLMSDWMNTYTTRDRPGRRRAYY
LSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAELEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYG
MFHQHIENGYQVEDPDNWLRDGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN
TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFLASASLQDALRQWRVAGNSDL
SKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWAITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEI
NARFLREVAVKWPGDMERRRRMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV
TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLAALVKAECGVDFNPDALFDVQ
VKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIGGKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLP
NYRVSSMEIIAPATDLSEQISTAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ
PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQERVAQAWQDPARWARMSILNTA
SSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV
>Mature_836_residues
SEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLMSDWMNTYTTRDRPGRRRAYYL
SLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAELEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYGM
FHQHIENGYQVEDPDNWLRDGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVNT
LRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFLASASLQDALRQWRVAGNSDLS
KFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWAITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEIN
ARFLREVAVKWPGDMERRRRMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGVT
PRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLAALVKAECGVDFNPDALFDVQV
KRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIGGKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLPN
YRVSSMEIIAPATDLSEQISTAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQP
QAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQERVAQAWQDPARWARMSILNTAS
SGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI5032009, Length=784, Percent_Identity=52.4234693877551, Blast_Score=804, Evalue=0.0,
Organism=Homo sapiens, GI71037379, Length=784, Percent_Identity=50.8928571428571, Blast_Score=783, Evalue=0.0,
Organism=Homo sapiens, GI21361370, Length=785, Percent_Identity=51.8471337579618, Blast_Score=779, Evalue=0.0,
Organism=Homo sapiens, GI255653002, Length=696, Percent_Identity=51.1494252873563, Blast_Score=739, Evalue=0.0,
Organism=Homo sapiens, GI257900462, Length=676, Percent_Identity=52.5147928994083, Blast_Score=721, Evalue=0.0,
Organism=Escherichia coli, GI2367228, Length=826, Percent_Identity=46.4891041162228, Blast_Score=729, Evalue=0.0,
Organism=Escherichia coli, GI48994936, Length=750, Percent_Identity=47.0666666666667, Blast_Score=691, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17564550, Length=790, Percent_Identity=51.3924050632911, Blast_Score=799, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32566204, Length=790, Percent_Identity=51.3924050632911, Blast_Score=799, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325418, Length=825, Percent_Identity=47.5151515151515, Blast_Score=699, Evalue=0.0,
Organism=Drosophila melanogaster, GI78706832, Length=836, Percent_Identity=48.9234449760766, Blast_Score=780, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581010, Length=836, Percent_Identity=48.9234449760766, Blast_Score=780, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011833
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 94388; Mature: 94257

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLM
CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SDWMNTYTTRDRPGRRRAYYLSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAE
HHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYGMFHQHIENGYQVEDPDNWLR
CCCCCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCHHHHHHHHHCCCCCCCCCHHHHC
DGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN
CCCCCEEECCCEEEEEEECCCCCHHHHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHH
TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFL
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHH
ASASLQDALRQWRVAGNSDLSKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWA
HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH
ITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEINARFLREVAVKWPGDMERRR
HHHHHHHHHCCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC
TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLA
CHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH
ALVKAECGVDFNPDALFDVQVKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIG
HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
GKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLPNYRVSSMEIIAPATDLSEQI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHH
STAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ
HHCCCCCCCCCCEEEEEECEEEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCC
PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQER
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
VAQAWQDPARWARMSILNTASSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV
HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLM
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SDWMNTYTTRDRPGRRRAYYLSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAE
HHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYGMFHQHIENGYQVEDPDNWLR
CCCCCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCHHHHHHHHHCCCCCCCCCHHHHC
DGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN
CCCCCEEECCCEEEEEEECCCCCHHHHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHH
TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFL
HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHH
ASASLQDALRQWRVAGNSDLSKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWA
HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH
ITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEINARFLREVAVKWPGDMERRR
HHHHHHHHHCCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC
TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLA
CHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH
ALVKAECGVDFNPDALFDVQVKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIG
HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
GKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLPNYRVSSMEIIAPATDLSEQI
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHH
STAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ
HHCCCCCCCCCCEEEEEECEEEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCC
PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQER
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH
VAQAWQDPARWARMSILNTASSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV
HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]