| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is glgP [H]
Identifier: 74318074
GI number: 74318074
Start: 2142645
End: 2145158
Strand: Reverse
Name: glgP [H]
Synonym: Tbd_2056
Alternate gene names: 74318074
Gene position: 2145158-2142645 (Counterclockwise)
Preceding gene: 74318075
Following gene: 74318061
Centisome position: 73.72
GC content: 65.99
Gene sequence:
>2514_bases ATGTCTGAGCCGAATGCCGATTTCGTTCCCCTGCTCGCGCTCGAGCCGCTGCCGACGAGCGGCCGGGTCCTCACGCAGGA CCTCGAGCGCTACCAGTTCTACCATCTCGGGCGCCTGCCCTCCTGTCCGCCGATCTACACCTACAAGGCGCTCGCCTGGG CGCTGCGCGACCGCCTGATGTCGGACTGGATGAACACCTACACGACCCGCGACCGGCCGGGCCGGCGCCGCGCCTACTAT CTATCGCTCGAGTTCCTGATCGGGCGCGCACTCGCCAATCACGTGCTCAACCTCGGGCTCGACGCGGAATCGCGCGAGGC CCTGCACAACTTCGGCCAGACCCTCGAGGACATCGCCGAACTCGAGCCCGACGCCGGACTCGGTAACGGCGGCCTCGGAC GGCTCGCGGCCTGCTTCATGGACAGCTGCGCGACGCTCAACCTGCCGGTCATGGGCTACGGCCTGCACTACCAGTACGGC ATGTTCCACCAGCACATCGAAAACGGCTACCAGGTCGAGGATCCCGACAACTGGCTGCGCGACGGCAACCCCTGGGAAGT CGAGCGCTCCGAATTCACCTGCCGCGTCCAGTTCGGCGGCCACACCGAGCACTATCACGACAAGGCCGGCATCCACCGCG CGCGCTGGGCCGATACCAGCGACGTGCTCGCGGTGCCGTTCGACATGCCGATCTCGGGCTACCGCAACCGCGTCGTCAAC ACGCTGCGGCTGTGGAAGGCGGCGGCAACCGACGCTTTCGACCTCGACGAATTCAACGCCGGCAGTTATTCGGAAGCCGT CGCGGCGAAGAACCTCGCCGAGCACATCTCGATGGTGCTCTACCCGAACGACGCGAGCGAGAACGGCAAGGAGCTGCGCC TGCGTCAGCAATATTTCCTCGCGTCGGCGAGCCTGCAGGACGCGCTGCGGCAGTGGCGCGTCGCAGGCAACAGCGATTTA TCGAAGTTCGCGGAACACAACGTGTTCCAGATGAACGACACCCACCCGACGATCGCGGTCGCCGAGCTGATGCGTCTGCT GCTCGACATCATGGGCATGCAGTGGGACGAGGCCTGGGCGATCACCTCGCAGTGCATGGCCTACACCAACCATACGCTCC TGCCCGAAGCGCTCGAGCGCTGGCCGGTCGAGCTGTTCGAGCGGCTGCTTCCGCGCCCGCTCGAGATCATCTACGAGATC AACGCGCGCTTCCTGCGCGAGGTCGCGGTCAAGTGGCCCGGCGACATGGAGCGCCGCCGGCGCATGTCGATCATCGAAGA GGAACCGGTGCGGCAGGTGCGCATGGCCTGGCTCGCGATCGTCGGCAGCTTCTCGGTCAACGGCGTCGCCGCGCTGCACT CGCGCCTGCTGCAGGAGGGGCTGTTCCGCGACTTCGTCGAGCTGTGGCCCGACAAGTTCAACAACAAGACCAACGGTGTC ACGCCGCGCCGCTGGCTCGCCCACGCCAACCCGGGGCTCGGCAAGCTCGTCAGCGCGCGCATCGGCGAGGGCTGGATCGC CGAGCTCGCGCAGCTTGAGAAGCTCAAGGCCGCGGCCGACGAGCCCGCGCTGCAGGCCGAGTGGCGGGCCGTCAAGCGTG CCAACAAGGAACGGCTCGCGGCGCTCGTCAAGGCCGAGTGCGGCGTCGATTTCAATCCCGACGCGCTGTTTGACGTCCAG GTCAAGCGCATCCACGAATACAAGCGCCAGCTCCTCAACGTGCTGCACATCGTCCACCTGTACAACCGGCTCAACCATGG GGAGCTCGACGGCTGGGCCGACCGCTGCGTGCTGATCGGCGGCAAGGCCGCGCCGGGCTACGCCATGGCCAAGCGCATCA TCAAGCTCGTCAACAGCGTCGCCGAGGTCGTCAACAGCGATCCCGACATCAATGGCCGCCTCCACGTCGCCTTCCTGCCC AACTACCGTGTCAGCAGCATGGAAATCATCGCCCCGGCGACCGATCTGTCGGAGCAGATTTCCACCGCCGGCAAGGAGGC CTCGGGCACCGGCAACATGAAGTTCATGATGAACGGCGCGGTGACGATCGGCACCTACGACGGCGCGAACATCGAGATCC TCGAAGCGGTCGGCGCCGAGAATTTCTTCCTGTTCGGCCTGCGTGCCGACGAGGTCGAGGCCCTGCGTCCGCACTATCAG CCGCAGGCCTACGTCGACAAGGATCCCGCGCTGCGCGCCGTCATCGACCTGCTCGCGTCGGGTCACTTCAACCTGTGCGA GCCCGGCATCTTCGACGACATCGTCGATGCGCTGCTGAGTCCGCAGGACCCTTGGATGGTGCTCGCTGATTTCCGTAGCT ACGTCGACGCGCAGGAACGCGTCGCGCAGGCCTGGCAGGATCCGGCGCGCTGGGCGCGGATGAGCATTCTCAATACGGCG TCGAGCGGATTTTTCTCGACCGACCGCACGATGCAGGAATACAACGCGGATATCTGGAAGCTGAAGCCGTTCGCGGCGGA AGGGCGGCACGCGAGCGCCGGCACCGCCGTATAA
Upstream 100 bases:
>100_bases CGCCGCGTGCAGCAGACCGGAATGCGCCTGTCCTTCGACTGGCGGGAAAGCGCCGGCCACTACCTCGCGCTCTACGCGGC CGATTCCGCCGGAGAACCCG
Downstream 100 bases:
>100_bases GTCCTAGGCAGCCTGGACCGGGATCGTCTGGCGCGTGTCGACGATGGCGTTGGCGGCGTCGACGTAGACGAGTTCGGGCG CGTAGCGCGCCATCTCGAGT
Product: phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MSEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLMSDWMNTYTTRDRPGRRRAYY LSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAELEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYG MFHQHIENGYQVEDPDNWLRDGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFLASASLQDALRQWRVAGNSDL SKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWAITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEI NARFLREVAVKWPGDMERRRRMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLAALVKAECGVDFNPDALFDVQ VKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIGGKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLP NYRVSSMEIIAPATDLSEQISTAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQERVAQAWQDPARWARMSILNTA SSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV
Sequences:
>Translated_837_residues MSEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLMSDWMNTYTTRDRPGRRRAYY LSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAELEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYG MFHQHIENGYQVEDPDNWLRDGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFLASASLQDALRQWRVAGNSDL SKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWAITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEI NARFLREVAVKWPGDMERRRRMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLAALVKAECGVDFNPDALFDVQ VKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIGGKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLP NYRVSSMEIIAPATDLSEQISTAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQERVAQAWQDPARWARMSILNTA SSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV >Mature_836_residues SEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLMSDWMNTYTTRDRPGRRRAYYL SLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAELEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYGM FHQHIENGYQVEDPDNWLRDGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVNT LRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFLASASLQDALRQWRVAGNSDLS KFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWAITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEIN ARFLREVAVKWPGDMERRRRMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGVT PRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLAALVKAECGVDFNPDALFDVQV KRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIGGKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLPN YRVSSMEIIAPATDLSEQISTAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQP QAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQERVAQAWQDPARWARMSILNTAS SGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=784, Percent_Identity=52.4234693877551, Blast_Score=804, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=784, Percent_Identity=50.8928571428571, Blast_Score=783, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=785, Percent_Identity=51.8471337579618, Blast_Score=779, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=696, Percent_Identity=51.1494252873563, Blast_Score=739, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=676, Percent_Identity=52.5147928994083, Blast_Score=721, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=826, Percent_Identity=46.4891041162228, Blast_Score=729, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=750, Percent_Identity=47.0666666666667, Blast_Score=691, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=790, Percent_Identity=51.3924050632911, Blast_Score=799, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=790, Percent_Identity=51.3924050632911, Blast_Score=799, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=825, Percent_Identity=47.5151515151515, Blast_Score=699, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=836, Percent_Identity=48.9234449760766, Blast_Score=780, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=836, Percent_Identity=48.9234449760766, Blast_Score=780, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 94388; Mature: 94257
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLM CCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH SDWMNTYTTRDRPGRRRAYYLSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAE HHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYGMFHQHIENGYQVEDPDNWLR CCCCCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCHHHHHHHHHCCCCCCCCCHHHHC DGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN CCCCCEEECCCEEEEEEECCCCCHHHHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHH TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHH ASASLQDALRQWRVAGNSDLSKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWA HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH ITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEINARFLREVAVKWPGDMERRR HHHHHHHHHCCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH RMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLA CHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH ALVKAECGVDFNPDALFDVQVKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIG HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE GKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLPNYRVSSMEIIAPATDLSEQI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHH STAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ HHCCCCCCCCCCEEEEEECEEEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCC PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQER CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH VAQAWQDPARWARMSILNTASSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SEPNADFVPLLALEPLPTSGRVLTQDLERYQFYHLGRLPSCPPIYTYKALAWALRDRLM CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH SDWMNTYTTRDRPGRRRAYYLSLEFLIGRALANHVLNLGLDAESREALHNFGQTLEDIAE HHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LEPDAGLGNGGLGRLAACFMDSCATLNLPVMGYGLHYQYGMFHQHIENGYQVEDPDNWLR CCCCCCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCHHHHHHHHHCCCCCCCCCHHHHC DGNPWEVERSEFTCRVQFGGHTEHYHDKAGIHRARWADTSDVLAVPFDMPISGYRNRVVN CCCCCEEECCCEEEEEEECCCCCHHHHHHCCCHHCCCCCCCEEEECCCCCCHHHHHHHHH TLRLWKAAATDAFDLDEFNAGSYSEAVAAKNLAEHISMVLYPNDASENGKELRLRQQYFL HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHHH ASASLQDALRQWRVAGNSDLSKFAEHNVFQMNDTHPTIAVAELMRLLLDIMGMQWDEAWA HHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH ITSQCMAYTNHTLLPEALERWPVELFERLLPRPLEIIYEINARFLREVAVKWPGDMERRR HHHHHHHHHCCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHH RMSIIEEEPVRQVRMAWLAIVGSFSVNGVAALHSRLLQEGLFRDFVELWPDKFNNKTNGV HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCC TPRRWLAHANPGLGKLVSARIGEGWIAELAQLEKLKAAADEPALQAEWRAVKRANKERLA CHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH ALVKAECGVDFNPDALFDVQVKRIHEYKRQLLNVLHIVHLYNRLNHGELDGWADRCVLIG HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE GKAAPGYAMAKRIIKLVNSVAEVVNSDPDINGRLHVAFLPNYRVSSMEIIAPATDLSEQI CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEECCHHHHHHH STAGKEASGTGNMKFMMNGAVTIGTYDGANIEILEAVGAENFFLFGLRADEVEALRPHYQ HHCCCCCCCCCCEEEEEECEEEEEECCCCCEEEEEECCCCCEEEEECCCCHHHHHCCCCC PQAYVDKDPALRAVIDLLASGHFNLCEPGIFDDIVDALLSPQDPWMVLADFRSYVDAQER CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH VAQAWQDPARWARMSILNTASSGFFSTDRTMQEYNADIWKLKPFAAEGRHASAGTAV HHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]