| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is glgA [H]
Identifier: 74318075
GI number: 74318075
Start: 2145151
End: 2146647
Strand: Reverse
Name: glgA [H]
Synonym: Tbd_2057
Alternate gene names: 74318075
Gene position: 2146647-2145151 (Counterclockwise)
Preceding gene: 74318076
Following gene: 74318074
Centisome position: 73.77
GC content: 68.74
Gene sequence:
>1497_bases ATGAAACGCGGAGCAATGAAGGTGCTGTTCGTCGCGAGCGAGGCCTTTCCCCTGGTCAAGACGGGCGGACTCGGCGACGT CCTGCACGGACTTCCCCAGGCCTTGCACGGCCTCGGCGTCGGCGTCCGACTCCTGCTGCCCGGCTATCGTACGCTCCTGC GCCAGCTCGACCAGGTGCGGATAGTCGCCTGGTTCGACGTGCGCGGGGCGGAGGGGCCGGTCGCCGCGCGCGTGCTCGAG ACGCGTCATCCGGGGTTCGATTTCCCGCTGTGGATCGTCGATTGCCCGCCGCTGTTCGATCGCCCGGGCAATCCTTACGT CGACGTCACGGGCTATGACTGGCCCGACAATGCCGAGCGTTTCGCGGTGTTCGCGCGCGTCGCCGCGCTGCTCGCACAGG ATGCCCACGAGGCCGGCTGGCTGCCGGACGTCGTGCACACCCACGACTGGCAGACCGGACTCGTGCCGGCTTTCCTCGCC GACCTGCCGGCACGTCCGCGGACGGTGTTCACGATCCACAACCTCGCCTACGGCGGCCACTTCCCGCACGGCGACTTCCT GCGCCTGCAACTGCCGGCGCATTGGTGGTCGCACGAGGGCGTCGAGTTTCACGGCGGCTTTTCGATGCTGAAGGCGGGCA TCGTCTACGCCGACGCGGTCACCACCGTAAGCCCGACCTATGCCGAGGAAATCTGCACGCCGGCCTTCGGCTACGGACTC GACGGCCTGCTGCGCTCGCGCCGCCACAAGCTGCACGGAATTCTCAACGGCATCGATAGCGCGACCTGGGACCCGGCTGA CGACCCGCATCTACGCGCGCGCTACACCGCGGGACGCATTCTGCCGGGCAAGCGGCGCGACAAGCAGGCGCTGCTCGAAC GTTTTCTGCCGGCGGCCGACGAAGCCGCGCTGCAGGCGCCGCTCGTCGGCCTGGTCGGCCGCCTCGTCGAGCAGAAGGGC ATCGACTGGGTGCTCGCGGCGATGCCGCTGCTGCTCGCCGAAACCGATGCGCGTTTCGTGTTGCTCGGCAGCGGCCAGGC CGCCTACGAGCAGAGGCTCACCCGGCTGGCCCGCCAGCACCCGACGCGCGTCTTCGTCGAGATCGGCTACGACGAGGCGC TGGCGCACCAGATCGAGGCCGGCGCCGACATGTTCCTGATGCCGTCGCGCTTCGAACCCTGCGGCCTGAACCAGATGTAC AGCCTGCGTTACGGCACCTTGCCGATCGTGTTCAAGACGGGCGGCCTCGCCGACACCATCGTCGACACCAACGAAGCGAG CCTGGCGGACGGCAGCGCGAATGGCTTCGTCTTCGACACGCCGGACGTGGCGCATTTCGTCGACGCGGTCCGCCGCGCGC TTGCCCTCTACCGTCAGCCCTCGCTGTGGCGCCGCGTGCAGCAGACCGGAATGCGCCTGTCCTTCGACTGGCGGGAAAGC GCCGGCCACTACCTCGCGCTCTACGCGGCCGATTCCGCCGGAGAACCCGATGTCTGA
Upstream 100 bases:
>100_bases GTCGATCGAAGTGACGCTGCCGCCGCTCGGGGCGATTTTCCTCAAGCCCTGTCCCTGAAGGGGACGCAGATGGATTCGAC AAGAACGACGGGAAATAACA
Downstream 100 bases:
>100_bases GCCGAATGCCGATTTCGTTCCCCTGCTCGCGCTCGAGCCGCTGCCGACGAGCGGCCGGGTCCTCACGCAGGACCTCGAGC GCTACCAGTTCTACCATCTC
Product: glycogen/starch synthase, ADP-glucose type
Products: NA
Alternate protein names: Starch [bacterial glycogen] synthase [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVRIVAWFDVRGAEGPVAARVLE TRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAERFAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLA DLPARPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKG IDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMY SLRYGTLPIVFKTGGLADTIVDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES AGHYLALYAADSAGEPDV
Sequences:
>Translated_498_residues MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVRIVAWFDVRGAEGPVAARVLE TRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAERFAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLA DLPARPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKG IDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMY SLRYGTLPIVFKTGGLADTIVDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES AGHYLALYAADSAGEPDV >Mature_498_residues MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVRIVAWFDVRGAEGPVAARVLE TRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAERFAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLA DLPARPRTVFTIHNLAYGGHFPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAADEAALQAPLVGLVGRLVEQKG IDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQHPTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMY SLRYGTLPIVFKTGGLADTIVDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES AGHYLALYAADSAGEPDV
Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]
COG id: COG0297
COG function: function code G; Glycogen synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789836, Length=485, Percent_Identity=43.5051546391753, Blast_Score=378, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011835 - InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.21 [H]
Molecular weight: Translated: 54945; Mature: 54945
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVR CCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHCCEE IVAWFDVRGAEGPVAARVLETRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAER EEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCCHHH FAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLADLPARPRTVFTIHNLAYGGH HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCC FPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL CCCCCEEEEEECCHHCCCCCEEECCCHHHHHHHHHEECHHHCCCCHHHHHHCCCHHCCCH DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAAD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCC EAALQAPLVGLVGRLVEQKGIDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC PTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTI CCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECCCCCHHE VDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES ECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHCC AGHYLALYAADSAGEPDV CCCEEEEEEECCCCCCCC >Mature Secondary Structure MKRGAMKVLFVASEAFPLVKTGGLGDVLHGLPQALHGLGVGVRLLLPGYRTLLRQLDQVR CCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHCCEE IVAWFDVRGAEGPVAARVLETRHPGFDFPLWIVDCPPLFDRPGNPYVDVTGYDWPDNAER EEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCCHHH FAVFARVAALLAQDAHEAGWLPDVVHTHDWQTGLVPAFLADLPARPRTVFTIHNLAYGGH HHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEECCCC FPHGDFLRLQLPAHWWSHEGVEFHGGFSMLKAGIVYADAVTTVSPTYAEEICTPAFGYGL CCCCCEEEEEECCHHCCCCCEEECCCHHHHHHHHHEECHHHCCCCHHHHHHCCCHHCCCH DGLLRSRRHKLHGILNGIDSATWDPADDPHLRARYTAGRILPGKRRDKQALLERFLPAAD HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCC EAALQAPLVGLVGRLVEQKGIDWVLAAMPLLLAETDARFVLLGSGQAAYEQRLTRLARQH HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHC PTRVFVEIGYDEALAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTI CCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCCEEEEEECCCCCHHE VDTNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRES ECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEHHCC AGHYLALYAADSAGEPDV CCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA