| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318030
Identifier: 74318030
GI number: 74318030
Start: 2101036
End: 2103177
Strand: Direct
Name: 74318030
Synonym: Tbd_2012
Alternate gene names: NA
Gene position: 2101036-2103177 (Clockwise)
Preceding gene: 74318029
Following gene: 74318031
Centisome position: 72.21
GC content: 64.99
Gene sequence:
>2142_bases ATGACTACGCACGACGCCGTTAGGGGGCTGGTCGCGCAGCCCCGTGCGCGCAACAAGCGCTTCAACAAACTGTGTGCTGG GACAGTGCTTGCCTCGGCAAGCCTGATTTCGGCGGCCGCCCTGGCAAGCAGCGCGCCGGCGCCCCGCGGCGGTTCGGGCG AAGTCACCCTGATCCACACCGGCGACATCCATGGCCATCTCGTGCCGCGGCCCAATTTGCGCAGTGACGCTCTCGGCTAC CGAGGCGTCAGCATGGAAGGCGGCGTAGCGCGCATGTATACCGTCATCAAGGCACTGCGGGCCCTGGCGACAAAGGACGG GGTCGACCGTTCGCTTCTGATCAACACCGGGGATACCCTGCAAGGCTCGGGCGAGGCGCTGTTCAGCCGGGGCCAGGCCA TGATCGATGTGCTGAATGCGTTCGGCTTTGTGGCCCACGCGCCCGGCAACTGGGACTTCCTGTACGGCACGGGCCGCTTC GAGGAAACCTTCAAGGGTTCCGCGACCGCGCCGCCGCTGGCGAACTGGAACGCGCTCGCGTCCAACCTCTATTACGCCAA CCAGTTCGACGACACCGCCCTATGCGGCGCGAAGGCCACGGATCCCGCGACCGGTGTGCCGCGCCCGCTCAGACGCGTCC TGCCGACACACAGCATCAGGCAGGTCGGCAAGGTGAAGGTCGGCATCCTCGGCATGACGACGGCGCGGGCGATCGCGGCC GTCGGGACAAGCGTCACGCAGAACTACCTGTTCACCGACGCCAAGGCCGAAGTGCCCTGCCTGGTCGATAAGCTGCGTAC GGTCGACAAGGTGGACGTGGTCGTGATGATTTCCGAACTCGAGATGGCGCGCGACATCGAGATCGCCGAGACCCTCGCTC CCAGCCCTGATGTGATCCTGAATTCGGACATGCACGAACGCACCACCGCGCCGATCGTCGTCGACCACGCCGACGGCCGC AACACCTTGATCGTGGAGGAGGGTCAGGACGGCACCGCGGTTGGAAACCTCAAGCTTCGGGTCAAGAACGGCAGAGTCGC GGACTGGAGCTTCAAACAGATCATCGTGGCGGAGGGAATCCCGGAGGACAAGACCATTGCCGCCAAGGTCGCCAAGGCGC GCGCGCCCTTCGTGGCGGGAAGCTTCGTGCCGGGCCAGAAAGTCACGGTGGGCGGCAACACCACTGAACTCCTGCGTCCC GTGGACGAGACCATCGCCTTCACCGAAGTCGACCTGCACCGCTCAAATTTCGTCGATGAGGACATGCCGGGGGTGGTCGA AGGCTCCTCCCATAACCTGATCGCGGATGCCATGGCCGCCGTATCCGGGGCCGAAAGCGCCTCGGTCCGGGGTTTCCGCT ACGGCACCCACGTTCCCGCAGGCTGGCCCATCACCATGGAGGACATCTACCATTACGTGCCCATCGCGGCCAAGCTGGGG CGAACCACCAAGGCATGCGGCGCCGACCTCAAGTTCGCTATCGAGCAGTCCACTCAAGGTACCTTCGCCTCAGATCCCAG CCTGTGGGCGGGAGGCTGGATGTTCGGCTACAACGGCGTGAGCTTTGACCTCGACGCCTGCGACGGACTCCTGGGTACGA CGCCAGCGCCGATCAACGGACCGACCCTCGCGTTCCCGACCCGGCCCTGGGGCACCAACCGCGGCAGCAACATCAAGGTG AATGGCCTGCCGCTCAAGGAGATGGACATCTACGACGGCCGCGCGACCATAGACGGTGCGCCCAACCCGACTTACCAGCA ATGTCTGAGCGCAGAGGGTGGTCCGGCCTACGAAGGCTACCGGGTTGCCGGCTACTGGTATGCCGACGACAAAACCACGA TCAACAACTGTAACCCCTGCCGCGGCCGCCAGGTCCAGGTCGTCAAGACCGACGGGTCGATCGTCCAGGTCGCAGGCCCG GGCGCATCCGCCACGCTGCCGCCGAGCGAGCAGCTCATGGACATCACCGAAGCCGTCGTCAAGTATCTGCGTGAAAACCT CGGGGGAACGGTGACTGCGGCCAACCTGCCGAGCCACCGCCTCACCGTGAAGCGGCTGCCGACGATCAGCCCAGCTGGCT ACAACTTCAAGATGATCCAACCGTTGAAGGGCGCCTCAACGGCAACCTGCCCGACGCTGTAA
Upstream 100 bases:
>100_bases TACCACGCCTGCGGCATAAACGGAATAAACGGGATTTGAGCCCCGTCCTTACGATGTGAGCCCTGTGCCTAGGGTTCGAC ATCCGAGGGAGGAGAACCCG
Downstream 100 bases:
>100_bases AAAAGCGTTGCCTCGCACGCCGAATCCGGCCCGGCGCAAGCCGGGATTTTCTTTTGATGTGCAACCGGCGTCAACGCGAG GCGTCAATCGTCTGTCATAC
Product: putative esterase
Products: NA
Alternate protein names: Sulfate Thiol Esterase SoxB; 5-Nucleotidase Domain-Containing Protein; 5-Nucleotidase; Sulfur Oxidation B Protein; Sulfur Oxidation Protein SoxB; Twin-Arginine Translocation Pathway Signal; 5-Nucleotidase/2' 3'-Cyclic Phosphodiesterase; Ser/Thr Protein Phosphatase Family Protein; Periplasmic 5-Nucleotidase; 5`-Nucleotidase Family Protein; Esterase; Sulfur Oxidation Protein; 5-Nucleotidase C- Domain Protein; Sulfur Oxidation Protein Sulfate Thiol Esterase; Mn-Dependent Hydrolase; 5-Nucleotidase Soxb Homolog; 5-Nucleotidase-Like Protein; Sulfate Thiol Esterase; 5-Nucleotidase-Like; Nucleotidase; Sulfate Thiol Esterase Soxb; Metallophosphoesterase; Protein UshA (Two S-Layer Domains
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MTTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHTGDIHGHLVPRPNLRSDALGY RGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTLQGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRF EETFKGSATAPPLANWNALASNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVILNSDMHERTTAPIVVDHADGR NTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGIPEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRP VDETIAFTEVDLHRSNFVDEDMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPINGPTLAFPTRPWGTNRGSNIKV NGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGYRVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGP GASATLPPSEQLMDITEAVVKYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL
Sequences:
>Translated_713_residues MTTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHTGDIHGHLVPRPNLRSDALGY RGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTLQGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRF EETFKGSATAPPLANWNALASNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVILNSDMHERTTAPIVVDHADGR NTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGIPEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRP VDETIAFTEVDLHRSNFVDEDMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPINGPTLAFPTRPWGTNRGSNIKV NGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGYRVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGP GASATLPPSEQLMDITEAVVKYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL >Mature_712_residues TTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHTGDIHGHLVPRPNLRSDALGYR GVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTLQGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRFE ETFKGSATAPPLANWNALASNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAAV GTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVILNSDMHERTTAPIVVDHADGRN TLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGIPEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRPV DETIAFTEVDLHRSNFVDEDMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLGR TTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPINGPTLAFPTRPWGTNRGSNIKVN GLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGYRVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGPG ASATLPPSEQLMDITEAVVKYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL
Specific function: Unknown
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505467, Length=373, Percent_Identity=25.7372654155496, Blast_Score=69, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75634; Mature: 75502
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00785 5_NUCLEOTIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHT CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE GDIHGHLVPRPNLRSDALGYRGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTL CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC QGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRFEETFKGSATAPPLANWNALA CCCCHHHHHCCHHHHHHHHHHCEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHHH SNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA HCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCEEEEEEEHHHHHHHHH VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVIL HHHHHHHCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHCCHHHHHCCCCCCEEE NSDMHERTTAPIVVDHADGRNTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGI CCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCEEECCCCEEEEEECCC PEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRPVDETIAFTEVDLHRSNFVDE CCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHEEEEEEECHHHCCCCC DMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG CCCCCEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHC RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPING CCHHHCCCCEEEEEECCCCCCCCCCCCCEECCEEECCCCCEEEHHHHCCCCCCCCCCCCC PTLAFPTRPWGTNRGSNIKVNGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGY CEEECCCCCCCCCCCCEEEECCCCCCCEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCE RVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGPGASATLPPSEQLMDITEAVV EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHH KYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL HHHHHHCCCEEEEECCCCCCEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure TTHDAVRGLVAQPRARNKRFNKLCAGTVLASASLISAAALASSAPAPRGGSGEVTLIHT CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEE GDIHGHLVPRPNLRSDALGYRGVSMEGGVARMYTVIKALRALATKDGVDRSLLINTGDTL CCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC QGSGEALFSRGQAMIDVLNAFGFVAHAPGNWDFLYGTGRFEETFKGSATAPPLANWNALA CCCCHHHHHCCHHHHHHHHHHCEEEECCCCEEEEEECCCCHHHCCCCCCCCCCCCHHHHH SNLYYANQFDDTALCGAKATDPATGVPRPLRRVLPTHSIRQVGKVKVGILGMTTARAIAA HCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHCCEEEEEEEHHHHHHHHH VGTSVTQNYLFTDAKAEVPCLVDKLRTVDKVDVVVMISELEMARDIEIAETLAPSPDVIL HHHHHHHCEEEECCCCCCHHHHHHHHCCCCCEEEEEEEHHHHHHCCHHHHHCCCCCCEEE NSDMHERTTAPIVVDHADGRNTLIVEEGQDGTAVGNLKLRVKNGRVADWSFKQIIVAEGI CCCCCCCCCCCEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCEEECCCCEEEEEECCC PEDKTIAAKVAKARAPFVAGSFVPGQKVTVGGNTTELLRPVDETIAFTEVDLHRSNFVDE CCCHHHHHHHHHHCCCEEECCCCCCCEEEECCCHHHHHHHHHHHEEEEEEECHHHCCCCC DMPGVVEGSSHNLIADAMAAVSGAESASVRGFRYGTHVPAGWPITMEDIYHYVPIAAKLG CCCCCEECCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHC RTTKACGADLKFAIEQSTQGTFASDPSLWAGGWMFGYNGVSFDLDACDGLLGTTPAPING CCHHHCCCCEEEEEECCCCCCCCCCCCCEECCEEECCCCCEEEHHHHCCCCCCCCCCCCC PTLAFPTRPWGTNRGSNIKVNGLPLKEMDIYDGRATIDGAPNPTYQQCLSAEGGPAYEGY CEEECCCCCCCCCCCCEEEECCCCCCCEEECCCCEEECCCCCHHHHHHHCCCCCCCCCCE RVAGYWYADDKTTINNCNPCRGRQVQVVKTDGSIVQVAGPGASATLPPSEQLMDITEAVV EEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHH KYLRENLGGTVTAANLPSHRLTVKRLPTISPAGYNFKMIQPLKGASTATCPTL HHHHHHCCCEEEEECCCCCCEEHHHCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA