Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318029

Identifier: 74318029

GI number: 74318029

Start: 2100209

End: 2100877

Strand: Direct

Name: 74318029

Synonym: Tbd_2011

Alternate gene names: NA

Gene position: 2100209-2100877 (Clockwise)

Preceding gene: 74318028

Following gene: 74318030

Centisome position: 72.18

GC content: 64.87

Gene sequence:

>669_bases
ATGAAACTCGTCCTTTTCGACCTCGACAACACGCTGCTCGCCGGCGATTCCGATTATGAGTGGGGGCAGTTCCTGATCGC
CAAGGGGGCTGTCGACGGCCCCGATTACGAGGCCAAGAACAAGGCGTTCTACGAGGCCTACAAGGCGGGCGGCCTCGATA
TTTACGCCTTCCTCGCTTTCGCCCTGCACCCGCTCGCCACCCACCCGCGCGCGCAGCTCGACGCCTGGCGTGCCGAATAT
ATCGAGACGCGCGTGCGAACGATGATTCCGCAGGCAGCCCGCGATCTCGTGCGCAGACACCTGGACGAAGCCGATCTCGT
CGCCGTCATCACCGCGACCAACAGTTTCATCACCGCACCGATCGCGCAGGAGCTCGGGGTCGAGCACCTGATCGCGACCG
AGCCCGAGCAGGTCGATGGCCGCTTCACCGGCAAGGTCGCCGGCACGCCGTGCTTTCGCGAAGGCAAGATCGTCCGCCTC
GGGCAATTCCTCGAGGCGCATGACACCCGCCTGGACGACCTCGACACGAGCTGGTTCTACAGCGATTCGCACAACGACCT
GCCGCTGCTGGAAAAAGTCCGGTACCCAGTCGCTGTCGACCCCGACCCCCTGTTACGCGCCCGCGCGCTGGAACGGGCGT
GGCCGGTGATCTCGTTGCGGCAGCCGTAA

Upstream 100 bases:

>100_bases
CCGTCTGGGGCGCCTACGAATTGCGCGAGTTCTGGCGCGACCGCGGACAGGGCGCCTGAACCACGTCGTCCCGTACCCCG
AATCTTGTAACCTACCGCTG

Downstream 100 bases:

>100_bases
CCGGCTCCGTGCCCGCGGGGCGCGCCTGCGCCCGGGCTGATACTTGATGGTTAATTCGTACCACGCCTGCGGCATAAACG
GAATAAACGGGATTTGAGCC

Product: phosphoserine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAFALHPLATHPRAQLDAWRAEY
IETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAPIAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRL
GQFLEAHDTRLDDLDTSWFYSDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP

Sequences:

>Translated_222_residues
MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAFALHPLATHPRAQLDAWRAEY
IETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAPIAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRL
GQFLEAHDTRLDDLDTSWFYSDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP
>Mature_222_residues
MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAFALHPLATHPRAQLDAWRAEY
IETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAPIAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRL
GQFLEAHDTRLDDLDTSWFYSDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the serB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 24964; Mature: 24964

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAF
CEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH
ALHPLATHPRAQLDAWRAEYIETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECH
IAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRLGQFLEAHDTRLDDLDTSWFY
HHHHCCCHHHHCCCCHHCCCEEECEECCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEE
SDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP
CCCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHCCEEEECCC
>Mature Secondary Structure
MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAF
CEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH
ALHPLATHPRAQLDAWRAEYIETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAP
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECH
IAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRLGQFLEAHDTRLDDLDTSWFY
HHHHCCCHHHHCCCCHHCCCEEECEECCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEE
SDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP
CCCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]