| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318029
Identifier: 74318029
GI number: 74318029
Start: 2100209
End: 2100877
Strand: Direct
Name: 74318029
Synonym: Tbd_2011
Alternate gene names: NA
Gene position: 2100209-2100877 (Clockwise)
Preceding gene: 74318028
Following gene: 74318030
Centisome position: 72.18
GC content: 64.87
Gene sequence:
>669_bases ATGAAACTCGTCCTTTTCGACCTCGACAACACGCTGCTCGCCGGCGATTCCGATTATGAGTGGGGGCAGTTCCTGATCGC CAAGGGGGCTGTCGACGGCCCCGATTACGAGGCCAAGAACAAGGCGTTCTACGAGGCCTACAAGGCGGGCGGCCTCGATA TTTACGCCTTCCTCGCTTTCGCCCTGCACCCGCTCGCCACCCACCCGCGCGCGCAGCTCGACGCCTGGCGTGCCGAATAT ATCGAGACGCGCGTGCGAACGATGATTCCGCAGGCAGCCCGCGATCTCGTGCGCAGACACCTGGACGAAGCCGATCTCGT CGCCGTCATCACCGCGACCAACAGTTTCATCACCGCACCGATCGCGCAGGAGCTCGGGGTCGAGCACCTGATCGCGACCG AGCCCGAGCAGGTCGATGGCCGCTTCACCGGCAAGGTCGCCGGCACGCCGTGCTTTCGCGAAGGCAAGATCGTCCGCCTC GGGCAATTCCTCGAGGCGCATGACACCCGCCTGGACGACCTCGACACGAGCTGGTTCTACAGCGATTCGCACAACGACCT GCCGCTGCTGGAAAAAGTCCGGTACCCAGTCGCTGTCGACCCCGACCCCCTGTTACGCGCCCGCGCGCTGGAACGGGCGT GGCCGGTGATCTCGTTGCGGCAGCCGTAA
Upstream 100 bases:
>100_bases CCGTCTGGGGCGCCTACGAATTGCGCGAGTTCTGGCGCGACCGCGGACAGGGCGCCTGAACCACGTCGTCCCGTACCCCG AATCTTGTAACCTACCGCTG
Downstream 100 bases:
>100_bases CCGGCTCCGTGCCCGCGGGGCGCGCCTGCGCCCGGGCTGATACTTGATGGTTAATTCGTACCACGCCTGCGGCATAAACG GAATAAACGGGATTTGAGCC
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAFALHPLATHPRAQLDAWRAEY IETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAPIAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRL GQFLEAHDTRLDDLDTSWFYSDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP
Sequences:
>Translated_222_residues MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAFALHPLATHPRAQLDAWRAEY IETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAPIAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRL GQFLEAHDTRLDDLDTSWFYSDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP >Mature_222_residues MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAFALHPLATHPRAQLDAWRAEY IETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAPIAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRL GQFLEAHDTRLDDLDTSWFYSDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24964; Mature: 24964
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAF CEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH ALHPLATHPRAQLDAWRAEYIETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECH IAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRLGQFLEAHDTRLDDLDTSWFY HHHHCCCHHHHCCCCHHCCCEEECEECCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEE SDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP CCCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHCCEEEECCC >Mature Secondary Structure MKLVLFDLDNTLLAGDSDYEWGQFLIAKGAVDGPDYEAKNKAFYEAYKAGGLDIYAFLAF CEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH ALHPLATHPRAQLDAWRAEYIETRVRTMIPQAARDLVRRHLDEADLVAVITATNSFITAP HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEECH IAQELGVEHLIATEPEQVDGRFTGKVAGTPCFREGKIVRLGQFLEAHDTRLDDLDTSWFY HHHHCCCHHHHCCCCHHCCCEEECEECCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCEEE SDSHNDLPLLEKVRYPVAVDPDPLLRARALERAWPVISLRQP CCCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]