Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317915

Identifier: 74317915

GI number: 74317915

Start: 1994288

End: 1995649

Strand: Reverse

Name: 74317915

Synonym: Tbd_1897

Alternate gene names: NA

Gene position: 1995649-1994288 (Counterclockwise)

Preceding gene: 74317916

Following gene: 74317914

Centisome position: 68.58

GC content: 66.15

Gene sequence:

>1362_bases
ATGATGCTCAAAACCCTGACAAGCACTCTCCTGGCGGCCGGCGTCCTGCTGGCCGCTTCTTCGGCCCACGCGGAAACGGT
CAACCTGCAGCAGGCCGTCGCCATGAGCCTCGCCGCCGATCCGCGCGTCAAGGAACGCGAACAGGTGGTCGAGGCCGCGC
GTGCGCTGCTCGAAGAGGCGAAGGGCAACGCCGGCTGGCGCATCAGCGCCAACGCCTTCATCGGGCTCGCGCCCGAGGTC
GAGGGCGGCTTCTATCAGGGTGGCGCGTACAGCGGCACGGTGCCGCGCACCGACGGCGACAACCTCGACGGCGTGTCGGA
CTGGACCCACCTCGATTTCGCGCTGATCAAGCCGCTCTTCACCTTCGGCAAGATCGAACACTACGGCGAGGCGGCCCAAG
GCAACGTCGACGTCAAGCGCGGCGAACTCAGCAAGACGCAGGGCGACATCGTCTATGACACCAAGCGCGCCTACTTCGGC
TATCTGACGGCGCGCGACATCCGGGTGTTCCTCGAGGACATCCAGTCGCGGCTCGACCGCGCGATCGCCTCGGTCGACCG
CAACCTCAAGGAAGAGAATGGCGAGTCGAAGCAGTCCGACCTCTATGCCCTGCAGACGGCGAAGGGCCTGCTGTCGAAAT
ACGTGCATCAGTCGCGGGCGATCGAGAAAGTCAGTCTCGACGGCCTCAAGGTGCTGACCGGGGTCGGCCTGAAGACGGAA
CTCGCCGTGGTCGACGAGCGTATCGCGCCCGTGCCGTTTCCGCAGGTCGAACTCGCCGACCTGCACGCGCGCGCCCTGCA
GGATCGCCCCGAAATGCGCCAGCTCGAGGCCGGGCTGCGCGCCCGGCGCGCGCTCGTCGCCGCGAAGAAGGCGGATCGCA
TGCCGAACGTCTACGCGGGCGTGATCGGGCAGTTCAACTACGCGTCCAACCGTGAACGGCTCGACAACCCCTATCTCACC
GACCCCTTCAACGGCGGCGGGCTGACCCCGGTCGTCGGCGTGAAATGGGACTCGGTCTTCGGCGTCACCGACGCGCGCAT
CAACCAGGCCCAGGCTGAACTCGAAGCGCTCAACCACAAGAAGGCCTTCGCGGTGTCGGGCATCCCCTTCGAGGTCAGCG
AGGCCTACGTCAACGCCAAAGCCAACCTCGACGCCCAGCAGGAACTCGCCGAGGGGGCCACGGCGGCGCGGCGCTGGATG
ATCGCTTCGCTGGCCGACCTGTCGGCGGGAATCGAAAGTGCCGGAACGGTGGCCGATGCGATCCGCAACTACGTTCTGGT
GCATACCGAATATCTGCGCACCGTGAACGACTACAACATGAACGTCGCGCAGCTTGCCCGGCTGACCGGTGAACTCCGCT
AA

Upstream 100 bases:

>100_bases
TCAAGGACAAGGACCGCATTGCCATCACGCAGGACGCCGTGGTCCTCGAAAACCTGATCGGCCATTTTCTCTACGGCAAG
GCTCAAGAAGGAGCGCCACA

Downstream 100 bases:

>100_bases
GGGGGAAGGCGTCTACTCCCTGCCTGCCCGAATCGGGCCCCCGTTCTCTACACATAGGAAACCGTTATGTTGCGCACGTT
TTTGCTGCCGCTGGCGCTGA

Product: putative outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MMLKTLTSTLLAAGVLLAASSAHAETVNLQQAVAMSLAADPRVKEREQVVEAARALLEEAKGNAGWRISANAFIGLAPEV
EGGFYQGGAYSGTVPRTDGDNLDGVSDWTHLDFALIKPLFTFGKIEHYGEAAQGNVDVKRGELSKTQGDIVYDTKRAYFG
YLTARDIRVFLEDIQSRLDRAIASVDRNLKEENGESKQSDLYALQTAKGLLSKYVHQSRAIEKVSLDGLKVLTGVGLKTE
LAVVDERIAPVPFPQVELADLHARALQDRPEMRQLEAGLRARRALVAAKKADRMPNVYAGVIGQFNYASNRERLDNPYLT
DPFNGGGLTPVVGVKWDSVFGVTDARINQAQAELEALNHKKAFAVSGIPFEVSEAYVNAKANLDAQQELAEGATAARRWM
IASLADLSAGIESAGTVADAIRNYVLVHTEYLRTVNDYNMNVAQLARLTGELR

Sequences:

>Translated_453_residues
MMLKTLTSTLLAAGVLLAASSAHAETVNLQQAVAMSLAADPRVKEREQVVEAARALLEEAKGNAGWRISANAFIGLAPEV
EGGFYQGGAYSGTVPRTDGDNLDGVSDWTHLDFALIKPLFTFGKIEHYGEAAQGNVDVKRGELSKTQGDIVYDTKRAYFG
YLTARDIRVFLEDIQSRLDRAIASVDRNLKEENGESKQSDLYALQTAKGLLSKYVHQSRAIEKVSLDGLKVLTGVGLKTE
LAVVDERIAPVPFPQVELADLHARALQDRPEMRQLEAGLRARRALVAAKKADRMPNVYAGVIGQFNYASNRERLDNPYLT
DPFNGGGLTPVVGVKWDSVFGVTDARINQAQAELEALNHKKAFAVSGIPFEVSEAYVNAKANLDAQQELAEGATAARRWM
IASLADLSAGIESAGTVADAIRNYVLVHTEYLRTVNDYNMNVAQLARLTGELR
>Mature_453_residues
MMLKTLTSTLLAAGVLLAASSAHAETVNLQQAVAMSLAADPRVKEREQVVEAARALLEEAKGNAGWRISANAFIGLAPEV
EGGFYQGGAYSGTVPRTDGDNLDGVSDWTHLDFALIKPLFTFGKIEHYGEAAQGNVDVKRGELSKTQGDIVYDTKRAYFG
YLTARDIRVFLEDIQSRLDRAIASVDRNLKEENGESKQSDLYALQTAKGLLSKYVHQSRAIEKVSLDGLKVLTGVGLKTE
LAVVDERIAPVPFPQVELADLHARALQDRPEMRQLEAGLRARRALVAAKKADRMPNVYAGVIGQFNYASNRERLDNPYLT
DPFNGGGLTPVVGVKWDSVFGVTDARINQAQAELEALNHKKAFAVSGIPFEVSEAYVNAKANLDAQQELAEGATAARRWM
IASLADLSAGIESAGTVADAIRNYVLVHTEYLRTVNDYNMNVAQLARLTGELR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49277; Mature: 49277

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLKTLTSTLLAAGVLLAASSAHAETVNLQQAVAMSLAADPRVKEREQVVEAARALLEEA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KGNAGWRISANAFIGLAPEVEGGFYQGGAYSGTVPRTDGDNLDGVSDWTHLDFALIKPLF
CCCCCEEEECCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TFGKIEHYGEAAQGNVDVKRGELSKTQGDIVYDTKRAYFGYLTARDIRVFLEDIQSRLDR
HHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AIASVDRNLKEENGESKQSDLYALQTAKGLLSKYVHQSRAIEKVSLDGLKVLTGVGLKTE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHH
LAVVDERIAPVPFPQVELADLHARALQDRPEMRQLEAGLRARRALVAAKKADRMPNVYAG
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VIGQFNYASNRERLDNPYLTDPFNGGGLTPVVGVKWDSVFGVTDARINQAQAELEALNHK
HHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCHHHHHHHHHHHHHHCCC
KAFAVSGIPFEVSEAYVNAKANLDAQQELAEGATAARRWMIASLADLSAGIESAGTVADA
HHEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHH
IRNYVLVHTEYLRTVNDYNMNVAQLARLTGELR
HHHHHEEEHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MMLKTLTSTLLAAGVLLAASSAHAETVNLQQAVAMSLAADPRVKEREQVVEAARALLEEA
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
KGNAGWRISANAFIGLAPEVEGGFYQGGAYSGTVPRTDGDNLDGVSDWTHLDFALIKPLF
CCCCCEEEECCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TFGKIEHYGEAAQGNVDVKRGELSKTQGDIVYDTKRAYFGYLTARDIRVFLEDIQSRLDR
HHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
AIASVDRNLKEENGESKQSDLYALQTAKGLLSKYVHQSRAIEKVSLDGLKVLTGVGLKTE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHH
LAVVDERIAPVPFPQVELADLHARALQDRPEMRQLEAGLRARRALVAAKKADRMPNVYAG
HHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VIGQFNYASNRERLDNPYLTDPFNGGGLTPVVGVKWDSVFGVTDARINQAQAELEALNHK
HHHCCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCHHHHHHHHHHHHHHCCC
KAFAVSGIPFEVSEAYVNAKANLDAQQELAEGATAARRWMIASLADLSAGIESAGTVADA
HHEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHH
IRNYVLVHTEYLRTVNDYNMNVAQLARLTGELR
HHHHHEEEHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA