| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is mlaC [H]
Identifier: 74317914
GI number: 74317914
Start: 1993586
End: 1994221
Strand: Reverse
Name: mlaC [H]
Synonym: Tbd_1896
Alternate gene names: 74317914
Gene position: 1994221-1993586 (Counterclockwise)
Preceding gene: 74317915
Following gene: 74317913
Centisome position: 68.53
GC content: 65.72
Gene sequence:
>636_bases ATGTTGCGCACGTTTTTGCTGCCGCTGGCGCTGATCGCCGGACTGTTCTCCACGCCGGTGACGGCGGCCGACACGCCGCC CGACGTTCTCGCCCGGACGACGACCCAGGAGGTCCTCGCCATCCTCAAGCAGGACCAGGAAATCCGGAGCGGCAACCTCA ACAAGGTGTATCAGCTCGTCGAGGCCAAGATCCTGCCAAACTTCGATTTCAACCGCATGACGCAGCTTGCCGTCGGCAAG CACTGGCCGCGCGCGAGCCCGAAGCAGAAGCAGGCGCTCGTGACCGAGTTCCGCAACCTTCTGGTGCGCACCTACTCGAG CTCGCTGACCGCGTTCACCAACCAGACCGTCGATTTCAAGCCCATGACGCTGAAGCCCGACGACACCGACGTGACCGTCC GCAGCGAGATCCGCCAGCCCGGCGGGCAGCCGATCCCGATCGACTACGCGATGTACAAGACGGCTTTCGGCTGGAAGGTC TACGACGTCTCGATCGACGGCGTGAGCCTCGTCACCAACTACCGCGCCTCGTTCGCGAGCACGATACGCCAGAGCGGCAT CGACGGCCTGGTCAAGACGCTGGCCGACAAGTCGGCGAGCGCCGCGGCCAAGCCGGCGGCACGCCCGGCGCCGTGA
Upstream 100 bases:
>100_bases GCAGCTTGCCCGGCTGACCGGTGAACTCCGCTAAGGGGGAAGGCGTCTACTCCCTGCCTGCCCGAATCGGGCCCCCGTTC TCTACACATAGGAAACCGTT
Downstream 100 bases:
>100_bases TCGCCTGCGACGGCGAGCGCTGCCGGCTCGGCGGCGCGGTGACGGTCGACAGCGTCGGCGGCCTGTTGCGCGAACTCGAA CCCCATTTGCGGGGCGGCGT
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLRTFLLPLALIAGLFSTPVTAADTPPDVLARTTTQEVLAILKQDQEIRSGNLNKVYQLVEAKILPNFDFNRMTQLAVGK HWPRASPKQKQALVTEFRNLLVRTYSSSLTAFTNQTVDFKPMTLKPDDTDVTVRSEIRQPGGQPIPIDYAMYKTAFGWKV YDVSIDGVSLVTNYRASFASTIRQSGIDGLVKTLADKSASAAAKPAARPAP
Sequences:
>Translated_211_residues MLRTFLLPLALIAGLFSTPVTAADTPPDVLARTTTQEVLAILKQDQEIRSGNLNKVYQLVEAKILPNFDFNRMTQLAVGK HWPRASPKQKQALVTEFRNLLVRTYSSSLTAFTNQTVDFKPMTLKPDDTDVTVRSEIRQPGGQPIPIDYAMYKTAFGWKV YDVSIDGVSLVTNYRASFASTIRQSGIDGLVKTLADKSASAAAKPAARPAP >Mature_211_residues MLRTFLLPLALIAGLFSTPVTAADTPPDVLARTTTQEVLAILKQDQEIRSGNLNKVYQLVEAKILPNFDFNRMTQLAVGK HWPRASPKQKQALVTEFRNLLVRTYSSSLTAFTNQTVDFKPMTLKPDDTDVTVRSEIRQPGGQPIPIDYAMYKTAFGWKV YDVSIDGVSLVTNYRASFASTIRQSGIDGLVKTLADKSASAAAKPAARPAP
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl
COG id: COG2854
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaC/ttg2D family [H]
Homologues:
Organism=Escherichia coli, GI1789583, Length=196, Percent_Identity=29.5918367346939, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023094 - InterPro: IPR008869 [H]
Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]
EC number: NA
Molecular weight: Translated: 23187; Mature: 23187
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTFLLPLALIAGLFSTPVTAADTPPDVLARTTTQEVLAILKQDQEIRSGNLNKVYQLV CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHH EAKILPNFDFNRMTQLAVGKHWPRASPKQKQALVTEFRNLLVRTYSSSLTAFTNQTVDFK HHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PMTLKPDDTDVTVRSEIRQPGGQPIPIDYAMYKTAFGWKVYDVSIDGVSLVTNYRASFAS CEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHH TIRQSGIDGLVKTLADKSASAAAKPAARPAP HHHHHCHHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MLRTFLLPLALIAGLFSTPVTAADTPPDVLARTTTQEVLAILKQDQEIRSGNLNKVYQLV CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHH EAKILPNFDFNRMTQLAVGKHWPRASPKQKQALVTEFRNLLVRTYSSSLTAFTNQTVDFK HHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PMTLKPDDTDVTVRSEIRQPGGQPIPIDYAMYKTAFGWKVYDVSIDGVSLVTNYRASFAS CEEECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHH TIRQSGIDGLVKTLADKSASAAAKPAARPAP HHHHHCHHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]