| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317901
Identifier: 74317901
GI number: 74317901
Start: 1981981
End: 1983099
Strand: Reverse
Name: 74317901
Synonym: Tbd_1883
Alternate gene names: NA
Gene position: 1983099-1981981 (Counterclockwise)
Preceding gene: 74317902
Following gene: 74317900
Centisome position: 68.15
GC content: 58.98
Gene sequence:
>1119_bases ATGAACGCTGGTATGGCGCACAATTCGAATGCGGTCGCCGACGACCACGCAGGTGCCGACTGGCTGCTGCCTCGGCGCCG CCACCCCTATTACATCGTCGCGCCCCGGTATGTGAGAATGTCCGCCGGAATCAAGGTGCTACATCTGCTCTGCCATGCGC TCAATCGGGCGGGAGAGCGTGCCTATCTCATTACACATCCCTACTGTTTGCCGCAGTACGCCACGCACCCGGAATTGATC ACGCCGGTTCTAACCAGGGCGACCCTCGAGCATGATTTCGCTTCAGGGTTGGCGCCCATCGTTGTCTATCCGGAAACTGT GCACGGTAATCCTTTCAACGCGCCCTTCGTGGTGCGCTATGTCCTTAATTTTCCCGGCTTGCTGGGCGGCGACTTTCAGT ATGACGAAGACGAATTCTGTATCGCCTATTCGGAAAATCTTGCCGGATCCATCCCTTCCGCTCGGCTGACGCTGTTCGTG CCCGCGTCCGACCCGCAGACATTTAGCCCCGTCCCGGAGCAGGAGCGGCGGGGCACCTGCTTCTACGCGGGAAAATATAA GTATCACCATGGCGGTGAATTGTTCGATATCACACGCGACAGCACTGAGATCACGCGAGACCTCCCCGATTCGCCCACGC AGCCACAGATCGCGGACCTCTTTCGCAGGTCTGAGCTCTTATATTGTTACGAGAACAGCGCCCTCGCCATCGAGGCGCTA CTGTGCGGCTGCCCGGTGGTCTTTCTCCCCAACCCGTATTTCGACCGGGTGATCGCGGCCGAGGAGCTTGGGTGGGACGG AATCGCATGGGGCACGGACCCTGACGAGATTGCCCGTGCCAAACACACTGTCCACTTGGCGCGAGATAATTTCCTGCACC ATTTCGATGTCTTCTACGAAGCGCTCGGGGAATTCATTGCGTCGACGCAGTCAGAGGCGGACGGGCGCCGGTACGAGACG CCCATTGCAGTGCCTTACCTGCGCGACACGAACCTCGTCCTCAAGATCGGCGGTGTTCTTGAGATCGTCCGCTCCTTCTA CCAGCAAAAGGGCGGCCTGAAGACGGCGGGACAAGTACTTAAGCGGATCAGTCAGCGTGGGCTCCGTTTTTTTCCGTGA
Upstream 100 bases:
>100_bases TGGACGAACTGCTCTCCCGCTATGAAATCGCGCCCTTGGCGCTCGATGCCCAGATCGCGAAGACGGCAGACTACATTCGC GATGCCTCGGGATGCTGCTG
Downstream 100 bases:
>100_bases TTCACGCGTGAGCGAAAACGAGACAATGCCCACGGACCATCTGCTCACAATTCTGATTCCCACCCGCAATCGGGCGGCCA AGCTCGATGATGCCTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; WavQ V; Glycosyltransferase-Like Protein; Family 2 Glycosyl Transferase
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MNAGMAHNSNAVADDHAGADWLLPRRRHPYYIVAPRYVRMSAGIKVLHLLCHALNRAGERAYLITHPYCLPQYATHPELI TPVLTRATLEHDFASGLAPIVVYPETVHGNPFNAPFVVRYVLNFPGLLGGDFQYDEDEFCIAYSENLAGSIPSARLTLFV PASDPQTFSPVPEQERRGTCFYAGKYKYHHGGELFDITRDSTEITRDLPDSPTQPQIADLFRRSELLYCYENSALAIEAL LCGCPVVFLPNPYFDRVIAAEELGWDGIAWGTDPDEIARAKHTVHLARDNFLHHFDVFYEALGEFIASTQSEADGRRYET PIAVPYLRDTNLVLKIGGVLEIVRSFYQQKGGLKTAGQVLKRISQRGLRFFP
Sequences:
>Translated_372_residues MNAGMAHNSNAVADDHAGADWLLPRRRHPYYIVAPRYVRMSAGIKVLHLLCHALNRAGERAYLITHPYCLPQYATHPELI TPVLTRATLEHDFASGLAPIVVYPETVHGNPFNAPFVVRYVLNFPGLLGGDFQYDEDEFCIAYSENLAGSIPSARLTLFV PASDPQTFSPVPEQERRGTCFYAGKYKYHHGGELFDITRDSTEITRDLPDSPTQPQIADLFRRSELLYCYENSALAIEAL LCGCPVVFLPNPYFDRVIAAEELGWDGIAWGTDPDEIARAKHTVHLARDNFLHHFDVFYEALGEFIASTQSEADGRRYET PIAVPYLRDTNLVLKIGGVLEIVRSFYQQKGGLKTAGQVLKRISQRGLRFFP >Mature_372_residues MNAGMAHNSNAVADDHAGADWLLPRRRHPYYIVAPRYVRMSAGIKVLHLLCHALNRAGERAYLITHPYCLPQYATHPELI TPVLTRATLEHDFASGLAPIVVYPETVHGNPFNAPFVVRYVLNFPGLLGGDFQYDEDEFCIAYSENLAGSIPSARLTLFV PASDPQTFSPVPEQERRGTCFYAGKYKYHHGGELFDITRDSTEITRDLPDSPTQPQIADLFRRSELLYCYENSALAIEAL LCGCPVVFLPNPYFDRVIAAEELGWDGIAWGTDPDEIARAKHTVHLARDNFLHHFDVFYEALGEFIASTQSEADGRRYET PIAVPYLRDTNLVLKIGGVLEIVRSFYQQKGGLKTAGQVLKRISQRGLRFFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41788; Mature: 41788
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGMAHNSNAVADDHAGADWLLPRRRHPYYIVAPRYVRMSAGIKVLHLLCHALNRAGER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEHHCCHHHHHHHHHHHHHCCCE AYLITHPYCLPQYATHPELITPVLTRATLEHDFASGLAPIVVYPETVHGNPFNAPFVVRY EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH VLNFPGLLGGDFQYDEDEFCIAYSENLAGSIPSARLTLFVPASDPQTFSPVPEQERRGTC HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCE FYAGKYKYHHGGELFDITRDSTEITRDLPDSPTQPQIADLFRRSELLYCYENSALAIEAL EEECCEEECCCCCEEEECCCCHHHHHCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHH LCGCPVVFLPNPYFDRVIAAEELGWDGIAWGTDPDEIARAKHTVHLARDNFLHHFDVFYE HHCCCEEECCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHEEEHHHCHHHHHHHHHH ALGEFIASTQSEADGRRYETPIAVPYLRDTNLVLKIGGVLEIVRSFYQQKGGLKTAGQVL HHHHHHHHCCCCCCCCEECCCEEEEEEECCCEEEEECHHHHHHHHHHHHCCCCCHHHHHH KRISQRGLRFFP HHHHHCCCCCCC >Mature Secondary Structure MNAGMAHNSNAVADDHAGADWLLPRRRHPYYIVAPRYVRMSAGIKVLHLLCHALNRAGER CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEHHCCHHHHHHHHHHHHHCCCE AYLITHPYCLPQYATHPELITPVLTRATLEHDFASGLAPIVVYPETVHGNPFNAPFVVRY EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHH VLNFPGLLGGDFQYDEDEFCIAYSENLAGSIPSARLTLFVPASDPQTFSPVPEQERRGTC HHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCE FYAGKYKYHHGGELFDITRDSTEITRDLPDSPTQPQIADLFRRSELLYCYENSALAIEAL EEECCEEECCCCCEEEECCCCHHHHHCCCCCCCCCHHHHHHHHCCEEEEECCCCHHHHHH LCGCPVVFLPNPYFDRVIAAEELGWDGIAWGTDPDEIARAKHTVHLARDNFLHHFDVFYE HHCCCEEECCCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHEEEHHHCHHHHHHHHHH ALGEFIASTQSEADGRRYETPIAVPYLRDTNLVLKIGGVLEIVRSFYQQKGGLKTAGQVL HHHHHHHHCCCCCCCCEECCCEEEEEEECCCEEEEECHHHHHHHHHHHHCCCCCHHHHHH KRISQRGLRFFP HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA