| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317900
Identifier: 74317900
GI number: 74317900
Start: 1979373
End: 1981832
Strand: Reverse
Name: 74317900
Synonym: Tbd_1882
Alternate gene names: NA
Gene position: 1981832-1979373 (Counterclockwise)
Preceding gene: 74317901
Following gene: 74317899
Centisome position: 68.11
GC content: 58.46
Gene sequence:
>2460_bases GTGACGTGCGTGGACAACTATTCCACCGATGCCACCCGAAGTGTGGTGGAGCAATTCGCGGCCAGTCACGCATTCGTCGA ATACCGCCATCAGGACCGTGAGTGCAGGACCGCCGAGGAAAGCCTGCAAAACGCCCTGCAATATGCCGAGGGAGAGTATG TATGGTCCTTCGGCGATGACGACCGGGTGGTGGAGACGGCCTTGGCCAGCCTGTTGCCAGTGCTCGAAGGGGCGGGCCCG GCTTTGGTCCTGCTGAACCTGGTAGCGCAGGTGGAGGAGGCGAGGCACGGATATTTCGATGCACCATATCCGACCATAGC CTACGCGCGGGGTCTCGATCTGTTTCGAGGTTTCGGCTTGGTCTCGGCCACGACGACCATTTCGTGCCTGTGCTTCCGGC GCGCGGGGCTGTCGCTGGCGGAGTGGCAGCGCTTGTCCGGTATCTCGCCGATATACAGCCATTCCGTGGCGATGATGCTC GCCTTTCATGACAGGCCTGCGGTAGTGATCCCGAAGCCGCTTGTAGTGTATACGGCCAACACCCTGTCTGAAGAATACGG GCGCATCACGCGCGTCGCCAGCGAGCGGCGGCAGCTGACACTTTTCTCGTTCACCATCGGGCTGATTCGACTTCTGACCG AGGCATCGTCCCGACTTGGGCTGCCAATCGAGACATTCCATTCGTTTGAGGAAATCGAGCTCTCGAAAAGCAACTGGCAG GTCAAGAACAGCCTGCTCGGGTTCTTTATCGCCCGAATGGCCTTGGAGCAGATATCGCTTGGCCGGAAGAGCCGTCACGC CGAGGAGAAGTTCAGCAGAGATCAGCGTCAGGAGATCTTGGACTTTTTCGAACGATCTCCTCACCCGGCATTGATGAATA TCATGCTTGTTGCCCTTGATCTTGATCGCGATCGGCGAGGTGTACTGACGACGCGCGCGGGGCGACTGCTGGAGGACCTC CGCGACAGTCTTGAAATGAATGAACGTGCATGGTTCGCTGTCGGGCGCGCGAGTCCCGGCGAGGCAACACGTGCCGCGAT CTTGTACCCGAAGGGGCGGCCATTCAAATTTGCGCGCGGCGTGCCTGGCGATGCGGACGGCCGGCCCGCGAAAATGGAGG ATCAGGAAACGATCGTACTCACCATCCTGATTCCGAGCTATAACAGGGCTCCGAACCTGGCGCGCCAGCTACGCGGTCTC GCCGAGGCGGGACTGGGACACGAGCAAGACGTCGAAGTGCTGGTTGCGGCGAATGCCAGCACCGACCGTACTCCTGCTGT CGCGCGCGCGGCAAAACATCTCCTTCCTAATCTGCGCGTCCTCGATTACCGGGAATTTGTGGATTCCGCAGAAGAAAATG TCAACCGGGCCTTTCCGCAAGTGCGCGGACGGTATGTCTGGCTGCTAGGGGATGATGACGAGATCGTCGTCCCTACGCTT CACCTCCTGCTCAATATTGTGCGTTCTGGCGGGGCGGCCGATGCCTATGTGTTCAACCAGTTGAATGCGAGGGAGTATGA GGCCGGGGCGAATCTTCGTCGGCATAAGCTCATCTATAACTTCGAGTTGCCTGGCGCTATCCGTGAAGAATGCGCATTTA GTGAGTGCGATTATCGCGACCTGGTACGGCGGCATGGTCTGACGACGGCAATGGCGCTCCTGTCGCGCTATGTACTGCGC AAGAGCGCATTTGTTGACAGCGCGGATTACATCGCGGTTTCCAAGATCTATTCGCACGTCTTCGGCTTCATGCGCGCGCT TGCCGGGAAGCGCACCGTATTTGTCAATTATCCGCTGGTAGCACGCAAAACATCCGAAGTCGGCGAGCGATTCCGCACGC TGACGAACAAGGCTTCTCAGCCCGCTTTCTGGCCCTGGACCACAGGGTTGATCAGACTGGCTCGCCATGCGGAGAGGGCC GGTTTGCTCGGGCCGGGCTTCCTCGTCGAGATCGCCGAAACTCACCCAGACGGCAGTCATTTTCGGCTGGTCGACGAGAT GTTTCTCCAGGTATTGCGGCAGATGGAGCATTACGTCGAAACCGGGGACCCGATGCAGCTGCAAAGCGTTGCCGAAATGG AGGAATTCCACGGTTATTTCCAGAATCTGGCGGCAAAAGAAAATCTTCCGCTGATAACCATGATGACTTGGCATTCGCGT CTTGACGGGCTGCGCCAGATGCAGATAGCGGGCTGCGAGTCAGGTGCGGTTCTTCTGCCCAAACTGGCGCTTCTGGCGCG TGATCTGATGGAGGCCAAGCAATACCTGCTCAAACGTTGCATCGTTCGGCGGGATATCGGCGCAATGGATAGGCTGTTTT TTTTCCTGATATGGAAGGTCCGTCGAAATCCTTGGTTGTATAGTGTCGGCCGCAAGCTGCGGACTGCCAGGTCGTTTGGG CTCGGTGCTCGGCTGACGCAGACGTATGCGCAGATTCTACATAAGGAACTGTGGCCCTGA
Upstream 100 bases:
>100_bases AATTCTGATTCCCACCCGCAATCGGGCGGCCAAGCTCGATGATGCCTTGAACTCATTGGTACGCGCTATCGAGCATGCCG ACTGCGCAGGGAACGTTGTC
Downstream 100 bases:
>100_bases CTGCGCCGAGGATGCCTACCTTGTTATCGATCGCGAACGTATAGCGCAGGCGGGTGCTTGATTCCGGAAAATGTTGATTT ACGGACGAGGTGAAAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 819; Mature: 818
Protein sequence:
>819_residues MTCVDNYSTDATRSVVEQFAASHAFVEYRHQDRECRTAEESLQNALQYAEGEYVWSFGDDDRVVETALASLLPVLEGAGP ALVLLNLVAQVEEARHGYFDAPYPTIAYARGLDLFRGFGLVSATTTISCLCFRRAGLSLAEWQRLSGISPIYSHSVAMML AFHDRPAVVIPKPLVVYTANTLSEEYGRITRVASERRQLTLFSFTIGLIRLLTEASSRLGLPIETFHSFEEIELSKSNWQ VKNSLLGFFIARMALEQISLGRKSRHAEEKFSRDQRQEILDFFERSPHPALMNIMLVALDLDRDRRGVLTTRAGRLLEDL RDSLEMNERAWFAVGRASPGEATRAAILYPKGRPFKFARGVPGDADGRPAKMEDQETIVLTILIPSYNRAPNLARQLRGL AEAGLGHEQDVEVLVAANASTDRTPAVARAAKHLLPNLRVLDYREFVDSAEENVNRAFPQVRGRYVWLLGDDDEIVVPTL HLLLNIVRSGGAADAYVFNQLNAREYEAGANLRRHKLIYNFELPGAIREECAFSECDYRDLVRRHGLTTAMALLSRYVLR KSAFVDSADYIAVSKIYSHVFGFMRALAGKRTVFVNYPLVARKTSEVGERFRTLTNKASQPAFWPWTTGLIRLARHAERA GLLGPGFLVEIAETHPDGSHFRLVDEMFLQVLRQMEHYVETGDPMQLQSVAEMEEFHGYFQNLAAKENLPLITMMTWHSR LDGLRQMQIAGCESGAVLLPKLALLARDLMEAKQYLLKRCIVRRDIGAMDRLFFFLIWKVRRNPWLYSVGRKLRTARSFG LGARLTQTYAQILHKELWP
Sequences:
>Translated_819_residues MTCVDNYSTDATRSVVEQFAASHAFVEYRHQDRECRTAEESLQNALQYAEGEYVWSFGDDDRVVETALASLLPVLEGAGP ALVLLNLVAQVEEARHGYFDAPYPTIAYARGLDLFRGFGLVSATTTISCLCFRRAGLSLAEWQRLSGISPIYSHSVAMML AFHDRPAVVIPKPLVVYTANTLSEEYGRITRVASERRQLTLFSFTIGLIRLLTEASSRLGLPIETFHSFEEIELSKSNWQ VKNSLLGFFIARMALEQISLGRKSRHAEEKFSRDQRQEILDFFERSPHPALMNIMLVALDLDRDRRGVLTTRAGRLLEDL RDSLEMNERAWFAVGRASPGEATRAAILYPKGRPFKFARGVPGDADGRPAKMEDQETIVLTILIPSYNRAPNLARQLRGL AEAGLGHEQDVEVLVAANASTDRTPAVARAAKHLLPNLRVLDYREFVDSAEENVNRAFPQVRGRYVWLLGDDDEIVVPTL HLLLNIVRSGGAADAYVFNQLNAREYEAGANLRRHKLIYNFELPGAIREECAFSECDYRDLVRRHGLTTAMALLSRYVLR KSAFVDSADYIAVSKIYSHVFGFMRALAGKRTVFVNYPLVARKTSEVGERFRTLTNKASQPAFWPWTTGLIRLARHAERA GLLGPGFLVEIAETHPDGSHFRLVDEMFLQVLRQMEHYVETGDPMQLQSVAEMEEFHGYFQNLAAKENLPLITMMTWHSR LDGLRQMQIAGCESGAVLLPKLALLARDLMEAKQYLLKRCIVRRDIGAMDRLFFFLIWKVRRNPWLYSVGRKLRTARSFG LGARLTQTYAQILHKELWP >Mature_818_residues TCVDNYSTDATRSVVEQFAASHAFVEYRHQDRECRTAEESLQNALQYAEGEYVWSFGDDDRVVETALASLLPVLEGAGPA LVLLNLVAQVEEARHGYFDAPYPTIAYARGLDLFRGFGLVSATTTISCLCFRRAGLSLAEWQRLSGISPIYSHSVAMMLA FHDRPAVVIPKPLVVYTANTLSEEYGRITRVASERRQLTLFSFTIGLIRLLTEASSRLGLPIETFHSFEEIELSKSNWQV KNSLLGFFIARMALEQISLGRKSRHAEEKFSRDQRQEILDFFERSPHPALMNIMLVALDLDRDRRGVLTTRAGRLLEDLR DSLEMNERAWFAVGRASPGEATRAAILYPKGRPFKFARGVPGDADGRPAKMEDQETIVLTILIPSYNRAPNLARQLRGLA EAGLGHEQDVEVLVAANASTDRTPAVARAAKHLLPNLRVLDYREFVDSAEENVNRAFPQVRGRYVWLLGDDDEIVVPTLH LLLNIVRSGGAADAYVFNQLNAREYEAGANLRRHKLIYNFELPGAIREECAFSECDYRDLVRRHGLTTAMALLSRYVLRK SAFVDSADYIAVSKIYSHVFGFMRALAGKRTVFVNYPLVARKTSEVGERFRTLTNKASQPAFWPWTTGLIRLARHAERAG LLGPGFLVEIAETHPDGSHFRLVDEMFLQVLRQMEHYVETGDPMQLQSVAEMEEFHGYFQNLAAKENLPLITMMTWHSRL DGLRQMQIAGCESGAVLLPKLALLARDLMEAKQYLLKRCIVRRDIGAMDRLFFFLIWKVRRNPWLYSVGRKLRTARSFGL GARLTQTYAQILHKELWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92712; Mature: 92580
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCVDNYSTDATRSVVEQFAASHAFVEYRHQDRECRTAEESLQNALQYAEGEYVWSFGDD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCC DRVVETALASLLPVLEGAGPALVLLNLVAQVEEARHGYFDAPYPTIAYARGLDLFRGFGL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH VSATTTISCLCFRRAGLSLAEWQRLSGISPIYSHSVAMMLAFHDRPAVVIPKPLVVYTAN HHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHEEECCCCCEEECCCEEEEECH TLSEEYGRITRVASERRQLTLFSFTIGLIRLLTEASSRLGLPIETFHSFEEIELSKSNWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCCHH VKNSLLGFFIARMALEQISLGRKSRHAEEKFSRDQRQEILDFFERSPHPALMNIMLVALD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE LDRDRRGVLTTRAGRLLEDLRDSLEMNERAWFAVGRASPGEATRAAILYPKGRPFKFARG CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEECCC VPGDADGRPAKMEDQETIVLTILIPSYNRAPNLARQLRGLAEAGLGHEQDVEVLVAANAS CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCC TDRTPAVARAAKHLLPNLRVLDYREFVDSAEENVNRAFPQVRGRYVWLLGDDDEIVVPTL CCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH HLLLNIVRSGGAADAYVFNQLNAREYEAGANLRRHKLIYNFELPGAIREECAFSECDYRD HHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCHHH LVRRHGLTTAMALLSRYVLRKSAFVDSADYIAVSKIYSHVFGFMRALAGKRTVFVNYPLV HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH ARKTSEVGERFRTLTNKASQPAFWPWTTGLIRLARHAERAGLLGPGFLVEIAETHPDGSH CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCH FRLVDEMFLQVLRQMEHYVETGDPMQLQSVAEMEEFHGYFQNLAAKENLPLITMMTWHSR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH LDGLRQMQIAGCESGAVLLPKLALLARDLMEAKQYLLKRCIVRRDIGAMDRLFFFLIWKV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RRNPWLYSVGRKLRTARSFGLGARLTQTYAQILHKELWP HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TCVDNYSTDATRSVVEQFAASHAFVEYRHQDRECRTAEESLQNALQYAEGEYVWSFGDD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECCCC DRVVETALASLLPVLEGAGPALVLLNLVAQVEEARHGYFDAPYPTIAYARGLDLFRGFGL HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCH VSATTTISCLCFRRAGLSLAEWQRLSGISPIYSHSVAMMLAFHDRPAVVIPKPLVVYTAN HHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHEEECCCCCEEECCCEEEEECH TLSEEYGRITRVASERRQLTLFSFTIGLIRLLTEASSRLGLPIETFHSFEEIELSKSNWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHHHHCCCCCHH VKNSLLGFFIARMALEQISLGRKSRHAEEKFSRDQRQEILDFFERSPHPALMNIMLVALD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEE LDRDRRGVLTTRAGRLLEDLRDSLEMNERAWFAVGRASPGEATRAAILYPKGRPFKFARG CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCEECCC VPGDADGRPAKMEDQETIVLTILIPSYNRAPNLARQLRGLAEAGLGHEQDVEVLVAANAS CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCC TDRTPAVARAAKHLLPNLRVLDYREFVDSAEENVNRAFPQVRGRYVWLLGDDDEIVVPTL CCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH HLLLNIVRSGGAADAYVFNQLNAREYEAGANLRRHKLIYNFELPGAIREECAFSECDYRD HHHHHHHHCCCCCHHHHHHCCCCHHHHCCCCCCCCEEEEEECCCCHHHHHHCCCCCCHHH LVRRHGLTTAMALLSRYVLRKSAFVDSADYIAVSKIYSHVFGFMRALAGKRTVFVNYPLV HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHH ARKTSEVGERFRTLTNKASQPAFWPWTTGLIRLARHAERAGLLGPGFLVEIAETHPDGSH CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCH FRLVDEMFLQVLRQMEHYVETGDPMQLQSVAEMEEFHGYFQNLAAKENLPLITMMTWHSR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH LDGLRQMQIAGCESGAVLLPKLALLARDLMEAKQYLLKRCIVRRDIGAMDRLFFFLIWKV HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RRNPWLYSVGRKLRTARSFGLGARLTQTYAQILHKELWP HCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA