Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317902

Identifier: 74317902

GI number: 74317902

Start: 1983099

End: 1984079

Strand: Reverse

Name: 74317902

Synonym: Tbd_1884

Alternate gene names: NA

Gene position: 1984079-1983099 (Counterclockwise)

Preceding gene: 74317903

Following gene: 74317901

Centisome position: 68.19

GC content: 58.51

Gene sequence:

>981_bases
ATGGCACTTGAATTCACCTCTGCTGTTTCCTCGGCACTGAATAATGACCCTCGTGTGTTCCTGATCACGGGCGCAACCGG
ATGGCTGGGGCGCGCCCTCACAGAGATGCTTCGCCGCGCCTTGGGAGAGGAGTTTTCCCAACGGGTGATTCTCTATGGGT
CACGAGAACAGTCGACGGCGCTTCGGGATGGGACTGCCGTCACCATCCGCGAATTGTCCAAAGCCACGCGTCTGCTGGAC
GGGCGTCCTGCCTTGCTTTTCCATTTTGCGTTTCTTACCAAGGACCGCGTCGGTTCGCTTTCCGATCAGGAATATGTGGA
GCGTAACCGGGAGATTTCAGGCATGGTCGCGTCCCTTGTTGAGGAGGGAAATGTCTCGGGCGTCATGCTTGCCTCCTCCG
GTGCTGTCTACGATCACCTCCTTGGACGGAAGCGAGACGCGGCGGCCGGTCTTTATGGCAGGCTCAAGGCGGAGGATGAA
TCGCGATTTGAGAAGGTGTGCCGCGCCCGAAGCGTGCGACTGGTAGCGCCGCGCATCTTTAACCTGAGTGGCCCCTGCAT
GAACAAGTTTGAAGCCTACGCCTTGTCGGCCATCATCGTTGACGTCTTGAAGGGTGGACCGATACGGCTGAGAGCCAACA
AGCGGGTTTTGCGGTCGTATTTTTACATCGGCGACCTGTTCGAGCTTTGCATGCGCTGCCTCATCGATGAATCCATGCAG
ACGGAGGCAGTCAGGTTTGACACGGTCGGGTCTGAAGTCGTCGATGTCGGCGAGCTTGCGGAGCGGGTTCGCACGGTGCT
AAATCGTCCCTCGATGCCAATCGAGCGCCCCGCACTCAACACAGATTCGGAGGACCGATACATCGGTGATCTCTCTGGCC
TGGACGAACTGCTCTCCCGCTATGAAATCGCGCCCTTGGCGCTCGATGCCCAGATCGCGAAGACGGCAGACTACATTCGC
GATGCCTCGGGATGCTGCTGA

Upstream 100 bases:

>100_bases
GCCGCGTTCGCCAGAATCAGAACGCATCATCAAGGAGACGTTCGGAGCCATACGGCGTCCCGATTTCTTGTCGGCCGCTG
AATGACTGGCAGGTGAAGCT

Downstream 100 bases:

>100_bases
TGAACGCTGGTATGGCGCACAATTCGAATGCGGTCGCCGACGACCACGCAGGTGCCGACTGGCTGCTGCCTCGGCGCCGC
CACCCCTATTACATCGTCGC

Product: putative nucleoside-diphosphate-sugar epimerase

Products: NA

Alternate protein names: NAD-Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MALEFTSAVSSALNNDPRVFLITGATGWLGRALTEMLRRALGEEFSQRVILYGSREQSTALRDGTAVTIRELSKATRLLD
GRPALLFHFAFLTKDRVGSLSDQEYVERNREISGMVASLVEEGNVSGVMLASSGAVYDHLLGRKRDAAAGLYGRLKAEDE
SRFEKVCRARSVRLVAPRIFNLSGPCMNKFEAYALSAIIVDVLKGGPIRLRANKRVLRSYFYIGDLFELCMRCLIDESMQ
TEAVRFDTVGSEVVDVGELAERVRTVLNRPSMPIERPALNTDSEDRYIGDLSGLDELLSRYEIAPLALDAQIAKTADYIR
DASGCC

Sequences:

>Translated_326_residues
MALEFTSAVSSALNNDPRVFLITGATGWLGRALTEMLRRALGEEFSQRVILYGSREQSTALRDGTAVTIRELSKATRLLD
GRPALLFHFAFLTKDRVGSLSDQEYVERNREISGMVASLVEEGNVSGVMLASSGAVYDHLLGRKRDAAAGLYGRLKAEDE
SRFEKVCRARSVRLVAPRIFNLSGPCMNKFEAYALSAIIVDVLKGGPIRLRANKRVLRSYFYIGDLFELCMRCLIDESMQ
TEAVRFDTVGSEVVDVGELAERVRTVLNRPSMPIERPALNTDSEDRYIGDLSGLDELLSRYEIAPLALDAQIAKTADYIR
DASGCC
>Mature_325_residues
ALEFTSAVSSALNNDPRVFLITGATGWLGRALTEMLRRALGEEFSQRVILYGSREQSTALRDGTAVTIRELSKATRLLDG
RPALLFHFAFLTKDRVGSLSDQEYVERNREISGMVASLVEEGNVSGVMLASSGAVYDHLLGRKRDAAAGLYGRLKAEDES
RFEKVCRARSVRLVAPRIFNLSGPCMNKFEAYALSAIIVDVLKGGPIRLRANKRVLRSYFYIGDLFELCMRCLIDESMQT
EAVRFDTVGSEVVDVGELAERVRTVLNRPSMPIERPALNTDSEDRYIGDLSGLDELLSRYEIAPLALDAQIAKTADYIRD
ASGCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36078; Mature: 35947

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEFTSAVSSALNNDPRVFLITGATGWLGRALTEMLRRALGEEFSQRVILYGSREQSTA
CCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHH
LRDGTAVTIRELSKATRLLDGRPALLFHFAFLTKDRVGSLSDQEYVERNREISGMVASLV
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHH
EEGNVSGVMLASSGAVYDHLLGRKRDAAAGLYGRLKAEDESRFEKVCRARSVRLVAPRIF
HCCCCCEEEEECCCCHHHHHHCCCCHHHHCHHHHCCCCHHHHHHHHHHHCCCEEECCHHC
NLSGPCMNKFEAYALSAIIVDVLKGGPIRLRANKRVLRSYFYIGDLFELCMRCLIDESMQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TEAVRFDTVGSEVVDVGELAERVRTVLNRPSMPIERPALNTDSEDRYIGDLSGLDELLSR
HHHEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YEIAPLALDAQIAKTADYIRDASGCC
HCCCCCEEHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALEFTSAVSSALNNDPRVFLITGATGWLGRALTEMLRRALGEEFSQRVILYGSREQSTA
CCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHH
LRDGTAVTIRELSKATRLLDGRPALLFHFAFLTKDRVGSLSDQEYVERNREISGMVASLV
HHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHH
EEGNVSGVMLASSGAVYDHLLGRKRDAAAGLYGRLKAEDESRFEKVCRARSVRLVAPRIF
HCCCCCEEEEECCCCHHHHHHCCCCHHHHCHHHHCCCCHHHHHHHHHHHCCCEEECCHHC
NLSGPCMNKFEAYALSAIIVDVLKGGPIRLRANKRVLRSYFYIGDLFELCMRCLIDESMQ
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TEAVRFDTVGSEVVDVGELAERVRTVLNRPSMPIERPALNTDSEDRYIGDLSGLDELLSR
HHHEEHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YEIAPLALDAQIAKTADYIRDASGCC
HCCCCCEEHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA