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The map label for this gene is yaaD [H]

Identifier: 74317877

GI number: 74317877

Start: 1953896

End: 1954333

Strand: Direct

Name: yaaD [H]

Synonym: Tbd_1859

Alternate gene names: 74317877

Gene position: 1953896-1954333 (Clockwise)

Preceding gene: 74317876

Following gene: 74317878

Centisome position: 67.15

GC content: 64.61

Gene sequence:

>438_bases
ATGAGCTCGCGCGCCGTCGCCGCCGGCGACACGCTCGAACTTCGCTACGCGCTGCGTCCGCGCGGAGGCGACGATCTCGT
CTCGAACTTCGACGACCCTGAAGCCGAAACGCTGACGCTCGGCGATGGCACGCTGTCGCCTGCGCTCGAAGCCTGGCTGA
TCGACCTGACGCCGGGCGAACGTCACGTCTTCCTGCTCGATCCCGGGCAGGCTTTCGGCCAGAGCGACCCCGGGCTGATT
CAAACGCTCGCAAAGACCGATCTGCCGCCGGACATGGAATTCGTACGCGATCATCTGGTCGAATTCGCGATGCCCGGCGG
CCAGACCCTCGCCGGGCGCATTCTCGAAGTCGCCGACGACGCGATCAAGGTCGACTTCAATCACCCTCTCGCCGACCTCT
CGATCGAATTCGAGGTCGAAGTCGTTCGCATCCTCTGA

Upstream 100 bases:

>100_bases
CCTGGCCTGCATTCAACGTTGCCGATTCGGCGATCACCGTCGGCGCGGCCCTGCTGATCTGGGACAGCCTGCGCGGCAAG
CCGAGCCCGGCCAAGGAATC

Downstream 100 bases:

>100_bases
CGGAAGATCGTTCATGACCCCCACCGTTCTGCTCGCCAATCCGCGCGGCTTCTGCGCCGGCGTCGACCGCGCGATCGCGA
TCGTCGAACGCGCGCTGGAA

Product: putative FKBP-type peptidyl-prolyl cis-trans isomerase 2

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSSRAVAAGDTLELRYALRPRGGDDLVSNFDDPEAETLTLGDGTLSPALEAWLIDLTPGERHVFLLDPGQAFGQSDPGLI
QTLAKTDLPPDMEFVRDHLVEFAMPGGQTLAGRILEVADDAIKVDFNHPLADLSIEFEVEVVRIL

Sequences:

>Translated_145_residues
MSSRAVAAGDTLELRYALRPRGGDDLVSNFDDPEAETLTLGDGTLSPALEAWLIDLTPGERHVFLLDPGQAFGQSDPGLI
QTLAKTDLPPDMEFVRDHLVEFAMPGGQTLAGRILEVADDAIKVDFNHPLADLSIEFEVEVVRIL
>Mature_144_residues
SSRAVAAGDTLELRYALRPRGGDDLVSNFDDPEAETLTLGDGTLSPALEAWLIDLTPGERHVFLLDPGQAFGQSDPGLIQ
TLAKTDLPPDMEFVRDHLVEFAMPGGQTLAGRILEVADDAIKVDFNHPLADLSIEFEVEVVRIL

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=142, Percent_Identity=31.6901408450704, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 15740; Mature: 15609

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRAVAAGDTLELRYALRPRGGDDLVSNFDDPEAETLTLGDGTLSPALEAWLIDLTPGE
CCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCC
RHVFLLDPGQAFGQSDPGLIQTLAKTDLPPDMEFVRDHLVEFAMPGGQTLAGRILEVADD
CEEEEECCCHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
AIKVDFNHPLADLSIEFEVEVVRIL
EEEEECCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure 
SSRAVAAGDTLELRYALRPRGGDDLVSNFDDPEAETLTLGDGTLSPALEAWLIDLTPGE
CCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCC
RHVFLLDPGQAFGQSDPGLIQTLAKTDLPPDMEFVRDHLVEFAMPGGQTLAGRILEVADD
CEEEEECCCHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
AIKVDFNHPLADLSIEFEVEVVRIL
EEEEECCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]