| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317855
Identifier: 74317855
GI number: 74317855
Start: 1935634
End: 1936086
Strand: Direct
Name: 74317855
Synonym: Tbd_1837
Alternate gene names: NA
Gene position: 1935634-1936086 (Clockwise)
Preceding gene: 74317852
Following gene: 74317856
Centisome position: 66.52
GC content: 63.8
Gene sequence:
>453_bases ATGTCACACATCTTTCCCCCTCTGCTGATTACCCTGCTGCTCGCCGGCGCACCGGCGGCACACGCCGCATCTGCGCAGGC CGCTGCGCCCGCGACGGCCGAGGTGCAGGAAAAGGTCGTCTACCACGTCAACGACGCGTCGTTGGCCCGCATGGCCTTGA CCAATATCAACAACCACCTGAACGCCAGCCCGAACGCGAAAATCGTCGTCGTCACCCACGGCAAGGGCATCGACTTCCTG CTCAACGACGCCAAGGACAGCAAAGGCGCCTTCGCGCCGGTCGTCGCCGGCATCAAGGAAAAGGGGGTCGATTTCCGCGT CTGCCGTAACACGCTCAAAGGCCGCAGCCTCGGTGACGACGCCGTCATCATGGAGGCGAACGTCGTGCCGTCCGGCGTCG CAGAAGTCGCCAAGCTGCAGGCCCGGGAAGGCTACGTCTATCTGAAGCCCTAA
Upstream 100 bases:
>100_bases AGAAAAAAACCGCGTCGGCTATGGAATAAGCGTGCGTGTCGAGGCGTCTTCCTACTAGGCTTGGATAAAGCCGATATCAA AACCAAAAGGAGACCCCGCA
Downstream 100 bases:
>100_bases GGCTTCCCTCGCCCGGGGCGGCAGGACTAGTTCCGCCCCGGAGTCCCTTTACCGTTCCACGTCGCCGAACTGCCGCGCGC AGTTCTGGGCGACTTTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSHIFPPLLITLLLAGAPAAHAASAQAAAPATAEVQEKVVYHVNDASLARMALTNINNHLNASPNAKIVVVTHGKGIDFL LNDAKDSKGAFAPVVAGIKEKGVDFRVCRNTLKGRSLGDDAVIMEANVVPSGVAEVAKLQAREGYVYLKP
Sequences:
>Translated_150_residues MSHIFPPLLITLLLAGAPAAHAASAQAAAPATAEVQEKVVYHVNDASLARMALTNINNHLNASPNAKIVVVTHGKGIDFL LNDAKDSKGAFAPVVAGIKEKGVDFRVCRNTLKGRSLGDDAVIMEANVVPSGVAEVAKLQAREGYVYLKP >Mature_149_residues SHIFPPLLITLLLAGAPAAHAASAQAAAPATAEVQEKVVYHVNDASLARMALTNINNHLNASPNAKIVVVTHGKGIDFLL NDAKDSKGAFAPVVAGIKEKGVDFRVCRNTLKGRSLGDDAVIMEANVVPSGVAEVAKLQAREGYVYLKP
Specific function: Unknown
COG id: COG1416
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15705; Mature: 15574
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHIFPPLLITLLLAGAPAAHAASAQAAAPATAEVQEKVVYHVNDASLARMALTNINNHL CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCHHHHHHHHHHCCCCC NASPNAKIVVVTHGKGIDFLLNDAKDSKGAFAPVVAGIKEKGVDFRVCRNTLKGRSLGDD CCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC AVIMEANVVPSGVAEVAKLQAREGYVYLKP EEEEECCCCCHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure SHIFPPLLITLLLAGAPAAHAASAQAAAPATAEVQEKVVYHVNDASLARMALTNINNHL CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEEEECCHHHHHHHHHHCCCCC NASPNAKIVVVTHGKGIDFLLNDAKDSKGAFAPVVAGIKEKGVDFRVCRNTLKGRSLGDD CCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC AVIMEANVVPSGVAEVAKLQAREGYVYLKP EEEEECCCCCHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA