Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317856

Identifier: 74317856

GI number: 74317856

Start: 1936221

End: 1937513

Strand: Direct

Name: 74317856

Synonym: Tbd_1838

Alternate gene names: NA

Gene position: 1936221-1937513 (Clockwise)

Preceding gene: 74317855

Following gene: 74317858

Centisome position: 66.54

GC content: 64.58

Gene sequence:

>1293_bases
GTGAAAACGAAAATCATCGTTCTGCTCGCCACCTGTCTACCGCTGTCCACCCAAGCCGCCAACTGGCTTCAGGTGCAGGG
CAACGAAGCACCCGGCAGCCCCCGTTTCAAGCCTTTCGGCTTTTTTCAGCCGACCTATACCGCCATCGACGCCGATCCGA
TCGACGGGCTGCTTGGTGCCGCTGCACCCTTCAACGGCCAGCTCACCCTGCCCAACCGCGTAGGGCCCGCACTGGACGAC
AAGGACGAGCTGCAGTTCTTCCGCGCCCGCCTGGGCCTGCGCGGCAATATCGTGCCGAGCCGGATCAATTACTTCCTTCT
GGCCGAGGCCGGGAAGAACGCGATCACCTCGCAGCGGGATCTGATGATGACCGACGCGTCGGTCACCTTCAATTACATTC
CGGGCGCCCGCGTGCGCGCCGGCCTGTTCAAACTGCCGACCAGCGAGGAGGCGCTGGTGGCGGTGCATCAGGCCTACCAC
TACGTCTACTTCAGCAATGCCGCGACCAATCTGCTCGTCGAAAATCAGGTCAAGTCGACAGGCGCAGTCAACGCGACCGG
CGCGTCCAACGGCGCGACCGTCAGCGCCGGCTCGGGCTTCCGCGACTGGGGCGTCCAGGTCTACGACTGGTTCAACCGGG
GCGCCTGGGAGTTTTCCTATGCGCTGATGGTGTCGAACGGCAACGAGATCGAGGAATTCTCCGACAACGACGGCAACAAG
GACGTCACCGGCCGCTTGCAGGCGTCCTACGTTTTCGGCAAGAGCAAGGGACCCAAGCGCGAAGACGCCTCGGTCTGGCT
GTGGCATCAGACCGGCGAGCGCGAATTCGGCGGCGAAGACTTCGACCGCATTCGCGAAGGCGTCGGCGCGCGCTACCAGA
AAGGCCCGTGGCGCGCGACCGCCGAATACCTGCGCGGCGACGGCATGATCGTCGGCGGGCCCAACCCGCCCTTCCCCGCC
CAGCCGGTCCAGATCGGCACCAACGAGAAAGCGGACGGCTGGTACCTCGAGGGCGGCTGGCGCTTCCACAAGAGCTGGGA
AGTCGACCTGCGCCATGACGTGTTCAACCGCATGACCGAGACTGCCGCGCTGGAACGGCAATTCACGACGACGACGCTGG
GGGTGAACTGGTTCTTCTACAAGAACACGCGGCTGACGTTGAACTACGAGTGGCGCGACCTGGAGGTTCCGAACCCATCC
GCCATCCCGGCCGGCGCCCAGCGCACCAACGCGCAAGCGATCGCAGACAACCTGGGCGACCGCGCCAGCGTGCAGCTGAC
CTGGTTCTTCTGA

Upstream 100 bases:

>100_bases
GCCCCGGAGTCCCTTTACCGTTCCACGTCGCCGAACTGCCGCGCGCAGTTCTGGGCGACTTTGCGCCCGAAAAACGCGAA
TACCTTGGGAGGAAGTCTCT

Downstream 100 bases:

>100_bases
CCGGCGACCCCGTCTTCCTCCTGCGGCGGCCTCGGGCCGCTTTTTTACTCGGCGCGAATGAAGTGCTCGCGGTAGTACCT
GAGCTCGTCGATGGATTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGAAAPFNGQLTLPNRVGPALDD
KDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRDLMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYH
YVYFSNAATNLLVENQVKSTGAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK
DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRATAEYLRGDGMIVGGPNPPFPA
QPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTETAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPS
AIPAGAQRTNAQAIADNLGDRASVQLTWFF

Sequences:

>Translated_430_residues
MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGAAAPFNGQLTLPNRVGPALDD
KDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRDLMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYH
YVYFSNAATNLLVENQVKSTGAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK
DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRATAEYLRGDGMIVGGPNPPFPA
QPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTETAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPS
AIPAGAQRTNAQAIADNLGDRASVQLTWFF
>Mature_430_residues
MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGAAAPFNGQLTLPNRVGPALDD
KDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRDLMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYH
YVYFSNAATNLLVENQVKSTGAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK
DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRATAEYLRGDGMIVGGPNPPFPA
QPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTETAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPS
AIPAGAQRTNAQAIADNLGDRASVQLTWFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47753; Mature: 47753

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGA
CCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHC
AAPFNGQLTLPNRVGPALDDKDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRD
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCCCCCCCCC
LMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYHYVYFSNAATNLLVENQVKST
EEEEECCEEEEECCCCHHCCCEEECCCCCHHHHEEEHHEEEEEECCCCCEEEEECCCCCC
GAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK
CCEEECCCCCCCEEECCCCCHHCCCEEEEHHCCCCEEEEEEEEEECCCCHHHCCCCCCCC
DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRAT
CEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHH
AEYLRGDGMIVGGPNPPFPAQPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTE
HHHHCCCCEEECCCCCCCCCCCEEECCCCCCCCEEEECCEEECCEEEEEHHHHHHHHHHH
TAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPSAIPAGAQRTNAQAIADNLGD
HHHHHHHEEEEEEEEEEEEEECEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCC
RASVQLTWFF
CEEEEEEEEC
>Mature Secondary Structure
MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGA
CCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHC
AAPFNGQLTLPNRVGPALDDKDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRD
CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCCCCCCCCC
LMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYHYVYFSNAATNLLVENQVKST
EEEEECCEEEEECCCCHHCCCEEECCCCCHHHHEEEHHEEEEEECCCCCEEEEECCCCCC
GAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK
CCEEECCCCCCCEEECCCCCHHCCCEEEEHHCCCCEEEEEEEEEECCCCHHHCCCCCCCC
DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRAT
CEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHH
AEYLRGDGMIVGGPNPPFPAQPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTE
HHHHCCCCEEECCCCCCCCCCCEEECCCCCCCCEEEECCEEECCEEEEEHHHHHHHHHHH
TAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPSAIPAGAQRTNAQAIADNLGD
HHHHHHHEEEEEEEEEEEEEECEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCC
RASVQLTWFF
CEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA