| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317856
Identifier: 74317856
GI number: 74317856
Start: 1936221
End: 1937513
Strand: Direct
Name: 74317856
Synonym: Tbd_1838
Alternate gene names: NA
Gene position: 1936221-1937513 (Clockwise)
Preceding gene: 74317855
Following gene: 74317858
Centisome position: 66.54
GC content: 64.58
Gene sequence:
>1293_bases GTGAAAACGAAAATCATCGTTCTGCTCGCCACCTGTCTACCGCTGTCCACCCAAGCCGCCAACTGGCTTCAGGTGCAGGG CAACGAAGCACCCGGCAGCCCCCGTTTCAAGCCTTTCGGCTTTTTTCAGCCGACCTATACCGCCATCGACGCCGATCCGA TCGACGGGCTGCTTGGTGCCGCTGCACCCTTCAACGGCCAGCTCACCCTGCCCAACCGCGTAGGGCCCGCACTGGACGAC AAGGACGAGCTGCAGTTCTTCCGCGCCCGCCTGGGCCTGCGCGGCAATATCGTGCCGAGCCGGATCAATTACTTCCTTCT GGCCGAGGCCGGGAAGAACGCGATCACCTCGCAGCGGGATCTGATGATGACCGACGCGTCGGTCACCTTCAATTACATTC CGGGCGCCCGCGTGCGCGCCGGCCTGTTCAAACTGCCGACCAGCGAGGAGGCGCTGGTGGCGGTGCATCAGGCCTACCAC TACGTCTACTTCAGCAATGCCGCGACCAATCTGCTCGTCGAAAATCAGGTCAAGTCGACAGGCGCAGTCAACGCGACCGG CGCGTCCAACGGCGCGACCGTCAGCGCCGGCTCGGGCTTCCGCGACTGGGGCGTCCAGGTCTACGACTGGTTCAACCGGG GCGCCTGGGAGTTTTCCTATGCGCTGATGGTGTCGAACGGCAACGAGATCGAGGAATTCTCCGACAACGACGGCAACAAG GACGTCACCGGCCGCTTGCAGGCGTCCTACGTTTTCGGCAAGAGCAAGGGACCCAAGCGCGAAGACGCCTCGGTCTGGCT GTGGCATCAGACCGGCGAGCGCGAATTCGGCGGCGAAGACTTCGACCGCATTCGCGAAGGCGTCGGCGCGCGCTACCAGA AAGGCCCGTGGCGCGCGACCGCCGAATACCTGCGCGGCGACGGCATGATCGTCGGCGGGCCCAACCCGCCCTTCCCCGCC CAGCCGGTCCAGATCGGCACCAACGAGAAAGCGGACGGCTGGTACCTCGAGGGCGGCTGGCGCTTCCACAAGAGCTGGGA AGTCGACCTGCGCCATGACGTGTTCAACCGCATGACCGAGACTGCCGCGCTGGAACGGCAATTCACGACGACGACGCTGG GGGTGAACTGGTTCTTCTACAAGAACACGCGGCTGACGTTGAACTACGAGTGGCGCGACCTGGAGGTTCCGAACCCATCC GCCATCCCGGCCGGCGCCCAGCGCACCAACGCGCAAGCGATCGCAGACAACCTGGGCGACCGCGCCAGCGTGCAGCTGAC CTGGTTCTTCTGA
Upstream 100 bases:
>100_bases GCCCCGGAGTCCCTTTACCGTTCCACGTCGCCGAACTGCCGCGCGCAGTTCTGGGCGACTTTGCGCCCGAAAAACGCGAA TACCTTGGGAGGAAGTCTCT
Downstream 100 bases:
>100_bases CCGGCGACCCCGTCTTCCTCCTGCGGCGGCCTCGGGCCGCTTTTTTACTCGGCGCGAATGAAGTGCTCGCGGTAGTACCT GAGCTCGTCGATGGATTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGAAAPFNGQLTLPNRVGPALDD KDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRDLMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYH YVYFSNAATNLLVENQVKSTGAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRATAEYLRGDGMIVGGPNPPFPA QPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTETAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPS AIPAGAQRTNAQAIADNLGDRASVQLTWFF
Sequences:
>Translated_430_residues MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGAAAPFNGQLTLPNRVGPALDD KDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRDLMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYH YVYFSNAATNLLVENQVKSTGAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRATAEYLRGDGMIVGGPNPPFPA QPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTETAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPS AIPAGAQRTNAQAIADNLGDRASVQLTWFF >Mature_430_residues MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGAAAPFNGQLTLPNRVGPALDD KDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRDLMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYH YVYFSNAATNLLVENQVKSTGAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRATAEYLRGDGMIVGGPNPPFPA QPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTETAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPS AIPAGAQRTNAQAIADNLGDRASVQLTWFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47753; Mature: 47753
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGA CCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHC AAPFNGQLTLPNRVGPALDDKDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRD CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCCCCCCCCC LMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYHYVYFSNAATNLLVENQVKST EEEEECCEEEEECCCCHHCCCEEECCCCCHHHHEEEHHEEEEEECCCCCEEEEECCCCCC GAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK CCEEECCCCCCCEEECCCCCHHCCCEEEEHHCCCCEEEEEEEEEECCCCHHHCCCCCCCC DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRAT CEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHH AEYLRGDGMIVGGPNPPFPAQPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTE HHHHCCCCEEECCCCCCCCCCCEEECCCCCCCCEEEECCEEECCEEEEEHHHHHHHHHHH TAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPSAIPAGAQRTNAQAIADNLGD HHHHHHHEEEEEEEEEEEEEECEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCC RASVQLTWFF CEEEEEEEEC >Mature Secondary Structure MKTKIIVLLATCLPLSTQAANWLQVQGNEAPGSPRFKPFGFFQPTYTAIDADPIDGLLGA CCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHC AAPFNGQLTLPNRVGPALDDKDELQFFRARLGLRGNIVPSRINYFLLAEAGKNAITSQRD CCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCEEEEEECCCCCCCCCCC LMMTDASVTFNYIPGARVRAGLFKLPTSEEALVAVHQAYHYVYFSNAATNLLVENQVKST EEEEECCEEEEECCCCHHCCCEEECCCCCHHHHEEEHHEEEEEECCCCCEEEEECCCCCC GAVNATGASNGATVSAGSGFRDWGVQVYDWFNRGAWEFSYALMVSNGNEIEEFSDNDGNK CCEEECCCCCCCEEECCCCCHHCCCEEEEHHCCCCEEEEEEEEEECCCCHHHCCCCCCCC DVTGRLQASYVFGKSKGPKREDASVWLWHQTGEREFGGEDFDRIREGVGARYQKGPWRAT CEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCHHH AEYLRGDGMIVGGPNPPFPAQPVQIGTNEKADGWYLEGGWRFHKSWEVDLRHDVFNRMTE HHHHCCCCEEECCCCCCCCCCCEEECCCCCCCCEEEECCEEECCEEEEEHHHHHHHHHHH TAALERQFTTTTLGVNWFFYKNTRLTLNYEWRDLEVPNPSAIPAGAQRTNAQAIADNLGD HHHHHHHEEEEEEEEEEEEEECEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCC RASVQLTWFF CEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA