| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is flgI
Identifier: 74317648
GI number: 74317648
Start: 1716680
End: 1717777
Strand: Reverse
Name: flgI
Synonym: Tbd_1630
Alternate gene names: 74317648
Gene position: 1717777-1716680 (Counterclockwise)
Preceding gene: 74317649
Following gene: 74317647
Centisome position: 59.03
GC content: 68.03
Gene sequence:
>1098_bases ATGAAGCTGCCGCATTTCTTCGTGTTGGCCGCGCTGGTGCTCTCTGGCGCCGCTCATGCCGAGCGCATCAAGGACATCGC CGCGATCCAGGGCGTGCGCGCCAACCAGCTCTTCGGCTACGGCCTCGTCGTCGGCCTCGACGGCACGGGCGACCAGACCA CGCAGACGCCTTTCACGACGCAGAGCATCGCCAACATGCTGACGCAGATGGGCGTCAACCTGCCGCCTGGCATCAACATG CAGTTGAAGAACGTCGCCGCCGTGATGGTGACCGCCGATCTGCCGCCCTTCGCCCAGGCCGGACAGGCTATCGACGTCAC CGTCTCGTCGATCGGCAACGCCAAGAGCCTGCGCGGCGGCACGCTCGTGATGGCGCCGCTCAAAGGCGCCGATGGTCTGG TCTACGCGATGGCGCAGGGCAGCCTCGTCGTCAGCGGCGCGGGCGCGTCCGCGAACGGCAGCAAGGTCCAGGTCAACCAT TTGAGCGTCGGCCGCATACCGGCCGGGGCGACGGTCGAGCGCACGGTCGCCACCGCGCTCGGCGAATCCGGCAGCATCAA CCTCGAACTGCGGCAGAGCGACTTCACGACCGCCAGTCGCGTCGTCGACGTGGTCAACGCGCGCTTCGGCGCGGACACCG CGCGTGCCCTCAACGCGCGCGTGGTCGCCGTCAAGACGCCGCTCGGCGCGAGTGAACGCGTCGCCTTTCTCGGCGCGATC GAGGGCCTCGAGGTCAGCCCGGGCCAGGCGATGGCTAAGGTCATCATCAACGCGCGCACCGGTTCGGTCGTCATGAACCA GACGGTCACGCTCGACCCGAGCGCGGTCTCGCACGGCAATCTGTCGGTGGTGATCAGCACCGCACCCGTGATCAGCCAGC CCGCGCCGTTTGGTCGCGGCGAAACCGTCGTCGCGGCGGAGTCGCAGATCGAGATTCGCCAGCAGCCCGGCGAAGTCATG ATGCTGAAGGGCGGTGCGTCGCTCGCCGACGTGGTCAAGGCGCTCAATTCGATCGGCGCGACGCCGCAGGACCTGCTCGC GATCCTGCAGGCCCTAAAGGCTTCGGGCGCGCTGCGTGCCGAACTCGAGGTGATCTGA
Upstream 100 bases:
>100_bases GCGCATCGAATACCGCAGCAGCGCCAAATTCGACAAGGCCGAGGTCATGAACTGGCTCGGGCGCTTCTTCCTCAGTTTCA TTCCGCTTTAAGGGGACCGC
Downstream 100 bases:
>100_bases GTGAGCATCGGCGGCGCCGACCTTTCCTCGAAGTTCGCGCTCGACGTCCAGGGCGTCAACCAGCTCAAGCTCGACGCCAG ACAGTCGTCGCCCGAAGCGC
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKLPHFFVLAALVLSGAAHAERIKDIAAIQGVRANQLFGYGLVVGLDGTGDQTTQTPFTTQSIANMLTQMGVNLPPGINM QLKNVAAVMVTADLPPFAQAGQAIDVTVSSIGNAKSLRGGTLVMAPLKGADGLVYAMAQGSLVVSGAGASANGSKVQVNH LSVGRIPAGATVERTVATALGESGSINLELRQSDFTTASRVVDVVNARFGADTARALNARVVAVKTPLGASERVAFLGAI EGLEVSPGQAMAKVIINARTGSVVMNQTVTLDPSAVSHGNLSVVISTAPVISQPAPFGRGETVVAAESQIEIRQQPGEVM MLKGGASLADVVKALNSIGATPQDLLAILQALKASGALRAELEVI
Sequences:
>Translated_365_residues MKLPHFFVLAALVLSGAAHAERIKDIAAIQGVRANQLFGYGLVVGLDGTGDQTTQTPFTTQSIANMLTQMGVNLPPGINM QLKNVAAVMVTADLPPFAQAGQAIDVTVSSIGNAKSLRGGTLVMAPLKGADGLVYAMAQGSLVVSGAGASANGSKVQVNH LSVGRIPAGATVERTVATALGESGSINLELRQSDFTTASRVVDVVNARFGADTARALNARVVAVKTPLGASERVAFLGAI EGLEVSPGQAMAKVIINARTGSVVMNQTVTLDPSAVSHGNLSVVISTAPVISQPAPFGRGETVVAAESQIEIRQQPGEVM MLKGGASLADVVKALNSIGATPQDLLAILQALKASGALRAELEVI >Mature_365_residues MKLPHFFVLAALVLSGAAHAERIKDIAAIQGVRANQLFGYGLVVGLDGTGDQTTQTPFTTQSIANMLTQMGVNLPPGINM QLKNVAAVMVTADLPPFAQAGQAIDVTVSSIGNAKSLRGGTLVMAPLKGADGLVYAMAQGSLVVSGAGASANGSKVQVNH LSVGRIPAGATVERTVATALGESGSINLELRQSDFTTASRVVDVVNARFGADTARALNARVVAVKTPLGASERVAFLGAI EGLEVSPGQAMAKVIINARTGSVVMNQTVTLDPSAVSHGNLSVVISTAPVISQPAPFGRGETVVAAESQIEIRQQPGEVM MLKGGASLADVVKALNSIGATPQDLLAILQALKASGALRAELEVI
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family
Homologues:
Organism=Escherichia coli, GI1787320, Length=358, Percent_Identity=56.4245810055866, Blast_Score=362, Evalue=1e-101,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): FLGI_THIDA (Q3SIE5)
Other databases:
- EMBL: CP000116 - RefSeq: YP_315388.1 - STRING: Q3SIE5 - GeneID: 3673015 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1630 - NMPDR: fig|292415.3.peg.1630 - eggNOG: COG1706 - HOGENOM: HBG321070 - OMA: NRSDFTT - PhylomeDB: Q3SIE5 - ProtClustDB: PRK05303 - BioCyc: TDEN292415:TBD_1630-MONOMER - HAMAP: MF_00416 - InterPro: IPR001782 - PRINTS: PR01010
Pfam domain/function: PF02119 FlgI
EC number: NA
Molecular weight: Translated: 37213; Mature: 37213
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPHFFVLAALVLSGAAHAERIKDIAAIQGVRANQLFGYGLVVGLDGTGDQTTQTPFTT CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECEEEEEEECCCCCCCCCCCCCH QSIANMLTQMGVNLPPGINMQLKNVAAVMVTADLPPFAQAGQAIDVTVSSIGNAKSLRGG HHHHHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCHHHCCCEEEEEEECCCCCCCCCCC TLVMAPLKGADGLVYAMAQGSLVVSGAGASANGSKVQVNHLSVGRIPAGATVERTVATAL EEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHC GESGSINLELRQSDFTTASRVVDVVNARFGADTARALNARVVAVKTPLGASERVAFLGAI CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEE EGLEVSPGQAMAKVIINARTGSVVMNQTVTLDPSAVSHGNLSVVISTAPVISQPAPFGRG CCCEECCCHHEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC ETVVAAESQIEIRQQPGEVMMLKGGASLADVVKALNSIGATPQDLLAILQALKASGALRA CEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE ELEVI EEEEC >Mature Secondary Structure MKLPHFFVLAALVLSGAAHAERIKDIAAIQGVRANQLFGYGLVVGLDGTGDQTTQTPFTT CCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECEEEEEEECCCCCCCCCCCCCH QSIANMLTQMGVNLPPGINMQLKNVAAVMVTADLPPFAQAGQAIDVTVSSIGNAKSLRGG HHHHHHHHHCCCCCCCCCCEEECCEEEEEEEECCCCHHHCCCEEEEEEECCCCCCCCCCC TLVMAPLKGADGLVYAMAQGSLVVSGAGASANGSKVQVNHLSVGRIPAGATVERTVATAL EEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHC GESGSINLELRQSDFTTASRVVDVVNARFGADTARALNARVVAVKTPLGASERVAFLGAI CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCCCCCCEEEEEEE EGLEVSPGQAMAKVIINARTGSVVMNQTVTLDPSAVSHGNLSVVISTAPVISQPAPFGRG CCCEECCCHHEEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC ETVVAAESQIEIRQQPGEVMMLKGGASLADVVKALNSIGATPQDLLAILQALKASGALRA CEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE ELEVI EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA