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The map label for this gene is flgH

Identifier: 74317649

GI number: 74317649

Start: 1717787

End: 1718455

Strand: Reverse

Name: flgH

Synonym: Tbd_1631

Alternate gene names: 74317649

Gene position: 1718455-1717787 (Counterclockwise)

Preceding gene: 74317650

Following gene: 74317648

Centisome position: 59.06

GC content: 66.22

Gene sequence:

>669_bases
ATGAAGACGACGCGCGCAATCGCAATGCTCGGACTGCTGCTCGGCCTCGCGGCCTGCGGCACGACGCCGTCGACCATCGT
CGAGCGGCCGACGACCGCGCGGCCGCAGGCACCTGCCGCGGTGCCAGCGACCAACGGCGCGATCTACCAGGCAGCGACCT
ATCGGCCGCTGTTCGAGGACCGGCGTGCCCGTCACGTCGGCGACGTGCTCACGATCGTCATCAACGAGCGCACCCGGGCC
GGCAAGGAGGCCTCGTCGAGCGCGTCGAAGACCAGTGCGGTCGACGCGTCGGTCGGTGGCGTCGCCAAGCTTCCGCTCAA
GATGTTCCAGGGCCTTGGCATCAACGCCGAAGCGTCGGCCGAGTATGAAGACGAGTCGGCGCTCGACTCGAGCAACACCT
TCAGCGGCAACGTCACGGTGACCGTGATCGAGGTCCTGCCGAACGGTAACCTCGTCGTCGCCGGCGAAAAGCAGATCGGG
CTCGACAAGGGCACCGAGTACATCCGCCTGTCGGGCGTCGTGCAGCCCGACACGATCCAGGCTGGCAACACGGTCTCGTC
GGCCAAGGTCGCCGACGCGCGCATCGAATACCGCAGCAGCGCCAAATTCGACAAGGCCGAGGTCATGAACTGGCTCGGGC
GCTTCTTCCTCAGTTTCATTCCGCTTTAA

Upstream 100 bases:

>100_bases
TCAACATGATCCAGACGCAGCGCGCCTATGAAATCAACAGCAAGGCGATCCAGACTTCCGACCAGATGCTGCAGCGTCTG
ACCCAGCTCTGAGTCACGCC

Downstream 100 bases:

>100_bases
GGGGACCGCATGAAGCTGCCGCATTTCTTCGTGTTGGCCGCGCTGGTGCTCTCTGGCGCCGCTCATGCCGAGCGCATCAA
GGACATCGCCGCGATCCAGG

Product: flagellar L-ring protein FlgH

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKTTRAIAMLGLLLGLAACGTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFEDRRARHVGDVLTIVINERTRA
GKEASSSASKTSAVDASVGGVAKLPLKMFQGLGINAEASAEYEDESALDSSNTFSGNVTVTVIEVLPNGNLVVAGEKQIG
LDKGTEYIRLSGVVQPDTIQAGNTVSSAKVADARIEYRSSAKFDKAEVMNWLGRFFLSFIPL

Sequences:

>Translated_222_residues
MKTTRAIAMLGLLLGLAACGTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFEDRRARHVGDVLTIVINERTRA
GKEASSSASKTSAVDASVGGVAKLPLKMFQGLGINAEASAEYEDESALDSSNTFSGNVTVTVIEVLPNGNLVVAGEKQIG
LDKGTEYIRLSGVVQPDTIQAGNTVSSAKVADARIEYRSSAKFDKAEVMNWLGRFFLSFIPL
>Mature_222_residues
MKTTRAIAMLGLLLGLAACGTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFEDRRARHVGDVLTIVINERTRA
GKEASSSASKTSAVDASVGGVAKLPLKMFQGLGINAEASAEYEDESALDSSNTFSGNVTVTVIEVLPNGNLVVAGEKQIG
LDKGTEYIRLSGVVQPDTIQAGNTVSSAKVADARIEYRSSAKFDKAEVMNWLGRFFLSFIPL

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=231, Percent_Identity=46.3203463203463, Blast_Score=174, Evalue=4e-45,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_THIDA (Q3SIE4)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_315389.1
- STRING:   Q3SIE4
- GeneID:   3673016
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_1631
- NMPDR:   fig|292415.3.peg.1631
- eggNOG:   COG2063
- HOGENOM:   HBG507455
- OMA:   IAGEKQI
- PhylomeDB:   Q3SIE4
- ProtClustDB:   CLSK939894
- BioCyc:   TDEN292415:TBD_1631-MONOMER
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 23434; Mature: 23434

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTRAIAMLGLLLGLAACGTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFED
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH
RRARHVGDVLTIVINERTRAGKEASSSASKTSAVDASVGGVAKLPLKMFQGLGINAEASA
HHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
EYEDESALDSSNTFSGNVTVTVIEVLPNGNLVVAGEKQIGLDKGTEYIRLSGVVQPDTIQ
CCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEEECCHHCCCCCCCCEEEEECCCCCCCCC
AGNTVSSAKVADARIEYRSSAKFDKAEVMNWLGRFFLSFIPL
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTTRAIAMLGLLLGLAACGTTPSTIVERPTTARPQAPAAVPATNGAIYQAATYRPLFED
CCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHH
RRARHVGDVLTIVINERTRAGKEASSSASKTSAVDASVGGVAKLPLKMFQGLGINAEASA
HHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
EYEDESALDSSNTFSGNVTVTVIEVLPNGNLVVAGEKQIGLDKGTEYIRLSGVVQPDTIQ
CCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEEECCHHCCCCCCCCEEEEECCCCCCCCC
AGNTVSSAKVADARIEYRSSAKFDKAEVMNWLGRFFLSFIPL
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA