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The map label for this gene is tse [H]

Identifier: 74317640

GI number: 74317640

Start: 1707478

End: 1709196

Strand: Reverse

Name: tse [H]

Synonym: Tbd_1622

Alternate gene names: 74317640

Gene position: 1709196-1707478 (Counterclockwise)

Preceding gene: 74317641

Following gene: 74317639

Centisome position: 58.74

GC content: 64.57

Gene sequence:

>1719_bases
ATGGAAATGTTAGCGAACCTGAGCATCAAGTCACGGCTGGTCTTCGTGATCGGTTTTTTATCCATTCTGCTGACCGCCAT
TGGAGGGCTTGGCCTTGTCAGCCTCAGCGCCACGAATGGGTCGCTTAAAACCGTCTATGAAGACAGGGTTGTCGGGCTGG
GGCACCTGGAGCGCATCAACGCGCTGATGAACGGCAGCCAGATCATCGTCGGCGAGGCCGTCGCCGGCCAGCTCTCGGCA
TTCCCGGACGATTCCGCGGTCGTTGACCAACGCGTCAACGACATCAAAAACACAATCACGGAAATCGACGGCATCTGGAA
GACCTTCCTCGCCTCGCACCTGAGCTCCGAAGAAAAGGCGCTCGCGGACGCATTCAGCGCGAGCCGACAGAAGTATGGGC
GCGAGGGCGTGGTTCCCGTGCTTGCCGCGTTGAGCGCGCACGACTTTCAGCAAGCCGGCGAAATTCTGCAGGGGCCGATG
AGAGAGACCTACCCGGCCGTGCGGGCCAACGCGGAAGCCCTCATCGCGTCTCAGCTCAAGCTCGCCCAGTCGGAGTTTGC
GGCCGCACAGTCGCGCTTCGTCATGGTGCGCAATATTTCGGTATTCGCGATCGTCGCCGGCGTGCTACTCGCCGGCTTGA
CTGGCGTGTGGCTAGTACGCGCGATCACGCGTCCTTTGAACCAAGCGGTGCGCATTGCGGAAAGCGTCGCAGCGGGCGAC
CTCACGCAGAAAATCGAAGTGCAGAGCCAGGACGAAACCGGCCAGTTGATGCAGGCCCTGAAGGACATGAACGTGAGCCT
CGCGGATATCGTCGGCCAAGTCCGCCACGGCACCGACACCATCGCCGTCGCCTCGCGCGAGATCGCCTCGGGCAACGCCG
ACCTCTCCTCGCGCACCGAATCGCAGGCCTCGAGCCTCGAAGAGACCGCGAGCTCGATGGAAGAACTGACCAGCACCGTA
CGGCAGAACGCCGAGAACGCCCGCCAGGCCAACCAGCTCGTCGTCTCCACCGCCGACGTCGCCGTCAAGGGTGGCGAAGT
CGTCGGCCAGGTCGTCGACACCATGGCCTCCATCAAGGACAGCTCGCGGAAGATCTCCGACATCATCGGCGTCATCGACG
GCATCGCCTTCCAGACCAACATCCTTGCGCTCAACGCCGCCGTCGAAGCGGCGCGTGCCGGCGAGCAGGGCAGGGGCTTC
GCCGTCGTCGCCAGCGAAGTCAGGAATCTTGCCCAGCGCAGCGCCGGTGCCGCCAAGGAAATCAAGTCCCTGATCGAAGA
CTCCGTCGGCAAGGTCGACGCCGGCAGCAAGCTCGTCGACGAAGCCGGCAAGACCATGGACGAGATCGTCAGCTCGGTCA
AACGCGTCACCGACATCATGAGCGAGATCGCCGCCGCGAGCCAGGAGCAGAGCGCCGGGATCGAGCAGGTCAACCAGGCC
GTCGGCCAGATGGACGAGATGACCCAGCAGAACGCGGCCTTGGTCGAAGAGGCGGCCGCTGCCGCCGAGAGCCTGCAGGA
GCAGGCGGCCAAGCTCGCCGACGCGGTCAGCGTGTTCAGACTCGACGGTGCATACGCGCAGCGCCGGGAAGTTCCGGTGT
CGGCCCCGCGCGTCGCCCCGTTGCCGACCCGTCCGCGTCCTGCCTCCGTGCCGGCCGCACGCCCGAAGAAGCTGGCAGCC
GCCCAAGGCAACGACGGCGGCGATTGGGAAGAGTTCTAG

Upstream 100 bases:

>100_bases
ATCGACAAATTGGCAGCCTGAAGCTGGAAATATGAAGCACGCAAATAAAAATAAGTAGAGCCCAAAAGCCTCGGTCCGGG
AGTCGTTTTTCAGAAAGGCT

Downstream 100 bases:

>100_bases
TCGTTTGCCTCTGAAGACACGCTATCGATGAATCATGCCGGATCCACAATCCGGCTGTGCGGGGCAGGGTCCCGATGCCC
ACCCTGACGGGCATCCCATT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MEMLANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERINALMNGSQIIVGEAVAGQLSA
FPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEEKALADAFSASRQKYGREGVVPVLAALSAHDFQQAGEILQGPM
RETYPAVRANAEALIASQLKLAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVWLVRAITRPLNQAVRIAESVAAGD
LTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADLSSRTESQASSLEETASSMEELTSTV
RQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASIKDSSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRNLAQRSAGAAKEIKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQA
VGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQRREVPVSAPRVAPLPTRPRPASVPAARPKKLAA
AQGNDGGDWEEF

Sequences:

>Translated_572_residues
MEMLANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERINALMNGSQIIVGEAVAGQLSA
FPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEEKALADAFSASRQKYGREGVVPVLAALSAHDFQQAGEILQGPM
RETYPAVRANAEALIASQLKLAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVWLVRAITRPLNQAVRIAESVAAGD
LTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADLSSRTESQASSLEETASSMEELTSTV
RQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASIKDSSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRNLAQRSAGAAKEIKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQA
VGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQRREVPVSAPRVAPLPTRPRPASVPAARPKKLAA
AQGNDGGDWEEF
>Mature_572_residues
MEMLANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERINALMNGSQIIVGEAVAGQLSA
FPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEEKALADAFSASRQKYGREGVVPVLAALSAHDFQQAGEILQGPM
RETYPAVRANAEALIASQLKLAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVWLVRAITRPLNQAVRIAESVAAGD
LTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADLSSRTESQASSLEETASSMEELTSTV
RQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASIKDSSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRNLAQRSAGAAKEIKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQA
VGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQRREVPVSAPRVAPLPTRPRPASVPAARPKKLAA
AQGNDGGDWEEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=367, Percent_Identity=58.58310626703, Blast_Score=350, Evalue=1e-97,
Organism=Escherichia coli, GI1788195, Length=358, Percent_Identity=57.5418994413408, Blast_Score=345, Evalue=5e-96,
Organism=Escherichia coli, GI1787690, Length=320, Percent_Identity=57.5, Blast_Score=325, Evalue=4e-90,
Organism=Escherichia coli, GI1788194, Length=534, Percent_Identity=43.4456928838951, Blast_Score=325, Evalue=4e-90,
Organism=Escherichia coli, GI1789453, Length=333, Percent_Identity=38.1381381381381, Blast_Score=220, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60168; Mature: 60168

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMLANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERIN
CCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHH
ALMNGSQIIVGEAVAGQLSAFPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEEKA
HHHCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LADAFSASRQKYGREGVVPVLAALSAHDFQQAGEILQGPMRETYPAVRANAEALIASQLK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
LAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVWLVRAITRPLNQAVRIAESVAAGD
HHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADLSSRTE
HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHH
SQASSLEETASSMEELTSTVRQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHH
SSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAGAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHH
IKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQA
HHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHH
VGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQRREVPVSAPRVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC
LPTRPRPASVPAARPKKLAAAQGNDGGDWEEF
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEMLANLSIKSRLVFVIGFLSILLTAIGGLGLVSLSATNGSLKTVYEDRVVGLGHLERIN
CCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHH
ALMNGSQIIVGEAVAGQLSAFPDDSAVVDQRVNDIKNTITEIDGIWKTFLASHLSSEEKA
HHHCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LADAFSASRQKYGREGVVPVLAALSAHDFQQAGEILQGPMRETYPAVRANAEALIASQLK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHH
LAQSEFAAAQSRFVMVRNISVFAIVAGVLLAGLTGVWLVRAITRPLNQAVRIAESVAAGD
HHHHHHHHHHHCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LTQKIEVQSQDETGQLMQALKDMNVSLADIVGQVRHGTDTIAVASREIASGNADLSSRTE
HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHH
SQASSLEETASSMEELTSTVRQNAENARQANQLVVSTADVAVKGGEVVGQVVDTMASIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHH
SSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAGAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHH
IKSLIEDSVGKVDAGSKLVDEAGKTMDEIVSSVKRVTDIMSEIAAASQEQSAGIEQVNQA
HHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHH
VGQMDEMTQQNAALVEEAAAAAESLQEQAAKLADAVSVFRLDGAYAQRREVPVSAPRVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCC
LPTRPRPASVPAARPKKLAAAQGNDGGDWEEF
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]