| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cheW [H]
Identifier: 74317641
GI number: 74317641
Start: 1709276
End: 1709779
Strand: Reverse
Name: cheW [H]
Synonym: Tbd_1623
Alternate gene names: 74317641
Gene position: 1709779-1709276 (Counterclockwise)
Preceding gene: 74317642
Following gene: 74317640
Centisome position: 58.76
GC content: 61.11
Gene sequence:
>504_bases ATGACTCTCCCGATGCAAACCCCGTCCAGCGCGCCGACCGAAGCGGAAGGTGACGGCAACGAATATCTCGCCTTCACGCT CGGGCGTGAGGAATACGGCATCGACATCCTGCGTGTGCAGGAGATCCGCGGCTACGAGCCGGTTACGCGCATCGCCAATG CGCCGGCCTTCATCAAGGGGGTCGTCAACCTGCGCGGAACGATCGTCCCGGTCGTCGACATGCGGATCAAGTTCAACCTC GGCGAGCCCACCTACGACCAGTTCACGGTCGTGATCATCCTGAACATCGGTGGCCGCGTCGTCGGCATGGTGGTCGACAG CGTTTCGGACGTCATGACGCTGGCGCCCGAGCAGGTCAAGCCTGCTCCGGAAATCGGGACGACTTTCGATACCGACTATC TGATCGGTCTCGGCACGCTCGACGACCGCATGCTGATCCTGGTCGATATCGACAAGCTCATGTCGAGCTCCGAAATGGGC CTGATCGACAAATTGGCAGCCTGA
Upstream 100 bases:
>100_bases CGGTGTTTCGCTGATCCTCGACGTCTCTGCGCTGCTGCGTTCCAGCCACCAGCTCAACGCGGATCCCATTTATTCCTGAT ACTCCAGAAGGATGCAATCC
Downstream 100 bases:
>100_bases AGCTGGAAATATGAAGCACGCAAATAAAAATAAGTAGAGCCCAAAAGCCTCGGTCCGGGAGTCGTTTTTCAGAAAGGCTA TGGAAATGTTAGCGAACCTG
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTLPMQTPSSAPTEAEGDGNEYLAFTLGREEYGIDILRVQEIRGYEPVTRIANAPAFIKGVVNLRGTIVPVVDMRIKFNL GEPTYDQFTVVIILNIGGRVVGMVVDSVSDVMTLAPEQVKPAPEIGTTFDTDYLIGLGTLDDRMLILVDIDKLMSSSEMG LIDKLAA
Sequences:
>Translated_167_residues MTLPMQTPSSAPTEAEGDGNEYLAFTLGREEYGIDILRVQEIRGYEPVTRIANAPAFIKGVVNLRGTIVPVVDMRIKFNL GEPTYDQFTVVIILNIGGRVVGMVVDSVSDVMTLAPEQVKPAPEIGTTFDTDYLIGLGTLDDRMLILVDIDKLMSSSEMG LIDKLAA >Mature_166_residues TLPMQTPSSAPTEAEGDGNEYLAFTLGREEYGIDILRVQEIRGYEPVTRIANAPAFIKGVVNLRGTIVPVVDMRIKFNLG EPTYDQFTVVIILNIGGRVVGMVVDSVSDVMTLAPEQVKPAPEIGTTFDTDYLIGLGTLDDRMLILVDIDKLMSSSEMGL IDKLAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=153, Percent_Identity=64.7058823529412, Blast_Score=203, Evalue=4e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18164; Mature: 18033
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPMQTPSSAPTEAEGDGNEYLAFTLGREEYGIDILRVQEIRGYEPVTRIANAPAFIKG CCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCEEEEEEEECCCCCHHHHHCCCCHHHHH VVNLRGTIVPVVDMRIKFNLGEPTYDQFTVVIILNIGGRVVGMVVDSVSDVMTLAPEQVK HHHCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCHHHCC PAPEIGTTFDTDYLIGLGTLDDRMLILVDIDKLMSSSEMGLIDKLAA CCCCCCCEECCCEEEEECCCCCCEEEEEEEHHHHCCCCCCCHHHHCC >Mature Secondary Structure TLPMQTPSSAPTEAEGDGNEYLAFTLGREEYGIDILRVQEIRGYEPVTRIANAPAFIKG CCCCCCCCCCCCCCCCCCCEEEEEEECCHHHCEEEEEEEECCCCCHHHHHCCCCHHHHH VVNLRGTIVPVVDMRIKFNLGEPTYDQFTVVIILNIGGRVVGMVVDSVSDVMTLAPEQVK HHHCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCHHHCC PAPEIGTTFDTDYLIGLGTLDDRMLILVDIDKLMSSSEMGLIDKLAA CCCCCCCEECCCEEEEECCCCCCEEEEEEEHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]