Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is nosR [H]

Identifier: 74317408

GI number: 74317408

Start: 1470548

End: 1473202

Strand: Direct

Name: nosR [H]

Synonym: Tbd_1390

Alternate gene names: 74317408

Gene position: 1470548-1473202 (Clockwise)

Preceding gene: 74317407

Following gene: 74317409

Centisome position: 50.54

GC content: 64.67

Gene sequence:

>2655_bases
ATGAAATACTTTTCCGCTTTTGCCTCCCGTCTCTTCGCGTCGGTCCTCCTTTGCTGCGCCAGTGGCCTGGCCACGGCGGC
CGAATCCGGCGCCACCTACGAAGCCCCGCTTCCGGTCCAATTGTCGACCGACCCCGATCTCTGCGCCTACGTCCCGTGCA
AGGATGTGATCCCCGGCGCGGACAGCTTTTCCAAACGCATGGGCAAGCCCGCTTACGTCGAGGCCTATGCAAACACGTCC
GACAGCGACGACGCGCCGGAAACCGACGGCGCGAAGGCGTCCGCTGACGAGAACGGACGCAAGCTCATCGGCTATGTGTT
CCTCTCGACCGACATCGTCGACATCCCCGCCTACTCCGGCAAACCCGTCGTCACGCTGATCGGCATGGACACCAAGGGCA
CGATCACGGGCGTGCGCGTTCTGCGGCATTCCGAGCCCATCCTGCTCCTCGGCATTCCCGAGTCGGAGCTCACCAAGTTC
ATCAAGCAATACGTCGGCAAGTTCGTCGGCTCCAAAATCGAAGTCGGCGCGGGTCGCCCGGACCAGGGCGTACTCGGCCT
CGATGCCATCACCGGTGCGACCGTCACCGTGATCGCGCAAAACCAGGTCGTTCTGCGCAGCGGCGTACAGATCGCCAAGC
AGGTCGGCATCATCAAGCCGACGATCCGGCCGCAGGCCAAATTCAAGCAGGCCGAAGGCAATCGCGACTGGAACACGCTC
GTCGACGAAGGCAGCGTCGAGCACCTGAGGGTCGAGACGGCCGACGTCGGCATGCCGCGCTCGCGCGAGCCTTACATCGA
CATGTACTTCGGCTACCTCAATGCCCCCGGGGTCGGCCGCAGCATCCTCGGCGACGCCGTCTACGAAGGCCTGATGTCAC
GCTTGAAGCCCGGCGAACATGCGATCTTCGTCGTCGCCAACGGCATCGAATCGTTCAAGGGCTCGGGTTTCGTGCGCGGC
GGCATCTACGACCGCGTCCAGGTCGCGCAGGACATGGACACGTTCACGTTCCGCGACCTCGACTATCTCAATCTGTACGC
GATCCGCGCCGACGGGGCGCCGAGCTTCCGCGAATCGGCGATCTTCATCGTCCGTTCGCCGACCTTCAGCGCAGCCTACC
CCTGGCACCTCGTATTCCTCGGCAACAAGATGGACCCGCAAACCGGCGTCCGCACCTTCGCCAACTTCAACCAGAAATAC
TGGCTGCCGGCCCGCCATCTCGAGGGCGGACGCCCGGAGATCGTCGAGCCCGAGGCGACCTGGGTGACGGTGTGGAAAAC
GCGCAAGACCGAGGTCATCCTGTTCGTGCTGTGGCTCGCCGCGGCGGGTACCGTCTACGCGCTGCGCGACAAGCTCGTGC
GTCGCGCCACCTACAAGGACCGCCGCTGGAAGGACGTCCCCAAGCTGCTGCTGTGGCTCACGTCGATCGGCTTCGTCGGC
TTCTACCTGCTCGCCGTGCCGTCGATCACCCAGGTGCTGACCTGGTTCCACGCCATCCTGTTCGAATGGCGCTGGGAGCT
GTTCCTGTCGGACCCGTTCATTTTCCTGTTCTGGATATTCATCATCGTCACCGTGTTCTTCTGGGGACGCGGGATGTTCT
GCGGCTGGATGTGCCCCTACGGCTCGCTGTCCGAGATCGTCTACAAACTCTCCGGAAAACTCGGTCTCAAGCGTTTCCAG
CGCCACCTGCTGCCGCAGCGCTGGCACGACCGGCTGAAATGGGTCAAGTACGGTGTCTTCGCGGTCCTGCTCGCGGTCTC
CTTCTATTCGATGGGGATGGCCGAGAAGATGGCCGAGGTCGAGCCGTTCAAGACGACCTTCCTGGTCGGCGTATGGAACC
GTACCTGGCCCTTCGTGACCTTCTGGCTGCTGCTGCTGCTCGCGTCGATGTTCTTCGAGCGCCCGTTCTGCAAATACCTG
TGCCCGCTCGGCGCCGCGCTCGCCGTCCCTTCGACCTTCCGCTGGTGGGGGCTCAAGCGCAAGAAGGAATGCGGCCCCTG
CGCGGCCTGCGCGGTCGGCTGCGGCTCGCAGGCGATCGACCCCTCGGGCCGTATCGACCAGCGCGAGTGTCTGCTCTGCC
TCGATTGCCAGGTGTTGTATTACGACGACCACGCCTGCCCGCCCCTCGCCCAGGAGCGCAAGCGGCGCACCAAGGCGGGC
GAACCGCTGACACCGATCGGCGCGAACGGCTACTTCATCCCGATCACGCCGGCGGCGGCGACGGTTGCGCCGGCTGCGGC
CGTGCGCCAGAGCGCGCCGGCGTGGATCGGCCAGGAAGTGTTCGACCACCTGTTCCCATGGAGCCGCAAGGTGTTCCAGC
AGCCGATCCTGCTGCAGGCGACGACCTTCGCTCTCACGATCCTCGTGACCTGGGTGTGGGTGCTCGGCGCCGCCGGCAGG
ATCGGCCCTGGCATCGTGCTCGGCTGGTGGTCCGCCTGGAGCGTGTACGAACTCGTCGTACGCATGCGCTGCAAGCCCTA
CGTCAAGGACGGCCCATGGTGGGGTCGCAACCTGCGCCCGGCCTCTTGGGCCGACATGGCGGCCTATGTCACCTTCAAGA
ACCTGCTGATCGCGGCGACGCTGTTCCTGATCATGAAGGGGACCGGCGTACTCGACTACCTGAGCGACGTACCCGGACTC
GAATGGCTCTACTGA

Upstream 100 bases:

>100_bases
CTTCATCCTTGTACGGCCGTGTTGTCCTGCAGCAGCGTGCGGCACGCGCAAGGCAACAATCAGGTCAGCGGCTTCGCCGT
GCCGGCCTACGGGATTCGTA

Downstream 100 bases:

>100_bases
CGCGCGTCGCCGCCCTGCTCTGGCTGCTGAGCACCGGCGCGACGGCGGCCGAACTCACGGTAAGCCCGGGCCAGTCGATC
GCGCAGGCGGTCGCGCGCGC

Product: transmembrane regulatory nosR transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 884; Mature: 884

Protein sequence:

>884_residues
MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGADSFSKRMGKPAYVEAYANTS
DSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSGKPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKF
IKQYVGKFVGSKIEVGAGRPDQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL
VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEHAIFVVANGIESFKGSGFVRG
GIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESAIFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKY
WLPARHLEGGRPEIVEPEATWVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG
FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPYGSLSEIVYKLSGKLGLKRFQ
RHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEVEPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYL
CPLGAALAVPSTFRWWGLKRKKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG
EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQATTFALTILVTWVWVLGAAGR
IGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRPASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGL
EWLY

Sequences:

>Translated_884_residues
MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGADSFSKRMGKPAYVEAYANTS
DSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSGKPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKF
IKQYVGKFVGSKIEVGAGRPDQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL
VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEHAIFVVANGIESFKGSGFVRG
GIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESAIFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKY
WLPARHLEGGRPEIVEPEATWVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG
FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPYGSLSEIVYKLSGKLGLKRFQ
RHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEVEPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYL
CPLGAALAVPSTFRWWGLKRKKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG
EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQATTFALTILVTWVWVLGAAGR
IGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRPASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGL
EWLY
>Mature_884_residues
MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGADSFSKRMGKPAYVEAYANTS
DSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSGKPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKF
IKQYVGKFVGSKIEVGAGRPDQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL
VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEHAIFVVANGIESFKGSGFVRG
GIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESAIFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKY
WLPARHLEGGRPEIVEPEATWVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG
FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPYGSLSEIVYKLSGKLGLKRFQ
RHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEVEPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYL
CPLGAALAVPSTFRWWGLKRKKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG
EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQATTFALTILVTWVWVLGAAGR
IGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRPASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGL
EWLY

Specific function: Transcriptional activator of the nitrous-oxide reductase gene nosZ [H]

COG id: COG3901

COG function: function code K; Regulator of nitric oxide reductase transcription

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787226, Length=190, Percent_Identity=30, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR011399 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 98851; Mature: 98851

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEECCCCCCEEECCHHHCCCCC
DSFSKRMGKPAYVEAYANTSDSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSG
CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCC
KPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKFIKQYVGKFVGSKIEVGAGRP
CCEEEEEECCCCCCHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCC
DQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL
CCCCEEEHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHH
VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEH
HCCCCCCEEEEEHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCE
AIFVVANGIESFKGSGFVRGGIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESA
EEEEEECCHHHHCCCCEEECCCHHHHHHHHCCCCCEECCCCEEEEEEEECCCCCCCCCCE
IFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKYWLPARHLEGGRPEIVEPEAT
EEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCHHHCCCCCCCEECCCCC
WVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG
EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
GSLSEIVYKLSGKLGLKRFQRHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEV
CCHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYLCPLGAALAVPSTFRWWGLKR
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCHHHHCCCC
KKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG
CCCCCCHHHHHHCCCCCCCCCCCCCCHHHEEEEEEEEEEEECCCCCCCHHHHHHHHHCCC
EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQA
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCHHHHH
TTFALTILVTWVWVLGAAGRIGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRP
HHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGLEWLY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEECCCCCCEEECCHHHCCCCC
DSFSKRMGKPAYVEAYANTSDSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSG
CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCC
KPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKFIKQYVGKFVGSKIEVGAGRP
CCEEEEEECCCCCCHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCC
DQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL
CCCCEEEHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHH
VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEH
HCCCCCCEEEEEHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCE
AIFVVANGIESFKGSGFVRGGIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESA
EEEEEECCHHHHCCCCEEECCCHHHHHHHHCCCCCEECCCCEEEEEEEECCCCCCCCCCE
IFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKYWLPARHLEGGRPEIVEPEAT
EEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCHHHCCCCCCCEECCCCC
WVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG
EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
GSLSEIVYKLSGKLGLKRFQRHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEV
CCHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYLCPLGAALAVPSTFRWWGLKR
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCHHHHCCCC
KKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG
CCCCCCHHHHHHCCCCCCCCCCCCCCHHHEEEEEEEEEEEECCCCCCCHHHHHHHHHCCC
EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQA
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCHHHHH
TTFALTILVTWVWVLGAAGRIGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRP
HHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGLEWLY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]