| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is nosR [H]
Identifier: 74317408
GI number: 74317408
Start: 1470548
End: 1473202
Strand: Direct
Name: nosR [H]
Synonym: Tbd_1390
Alternate gene names: 74317408
Gene position: 1470548-1473202 (Clockwise)
Preceding gene: 74317407
Following gene: 74317409
Centisome position: 50.54
GC content: 64.67
Gene sequence:
>2655_bases ATGAAATACTTTTCCGCTTTTGCCTCCCGTCTCTTCGCGTCGGTCCTCCTTTGCTGCGCCAGTGGCCTGGCCACGGCGGC CGAATCCGGCGCCACCTACGAAGCCCCGCTTCCGGTCCAATTGTCGACCGACCCCGATCTCTGCGCCTACGTCCCGTGCA AGGATGTGATCCCCGGCGCGGACAGCTTTTCCAAACGCATGGGCAAGCCCGCTTACGTCGAGGCCTATGCAAACACGTCC GACAGCGACGACGCGCCGGAAACCGACGGCGCGAAGGCGTCCGCTGACGAGAACGGACGCAAGCTCATCGGCTATGTGTT CCTCTCGACCGACATCGTCGACATCCCCGCCTACTCCGGCAAACCCGTCGTCACGCTGATCGGCATGGACACCAAGGGCA CGATCACGGGCGTGCGCGTTCTGCGGCATTCCGAGCCCATCCTGCTCCTCGGCATTCCCGAGTCGGAGCTCACCAAGTTC ATCAAGCAATACGTCGGCAAGTTCGTCGGCTCCAAAATCGAAGTCGGCGCGGGTCGCCCGGACCAGGGCGTACTCGGCCT CGATGCCATCACCGGTGCGACCGTCACCGTGATCGCGCAAAACCAGGTCGTTCTGCGCAGCGGCGTACAGATCGCCAAGC AGGTCGGCATCATCAAGCCGACGATCCGGCCGCAGGCCAAATTCAAGCAGGCCGAAGGCAATCGCGACTGGAACACGCTC GTCGACGAAGGCAGCGTCGAGCACCTGAGGGTCGAGACGGCCGACGTCGGCATGCCGCGCTCGCGCGAGCCTTACATCGA CATGTACTTCGGCTACCTCAATGCCCCCGGGGTCGGCCGCAGCATCCTCGGCGACGCCGTCTACGAAGGCCTGATGTCAC GCTTGAAGCCCGGCGAACATGCGATCTTCGTCGTCGCCAACGGCATCGAATCGTTCAAGGGCTCGGGTTTCGTGCGCGGC GGCATCTACGACCGCGTCCAGGTCGCGCAGGACATGGACACGTTCACGTTCCGCGACCTCGACTATCTCAATCTGTACGC GATCCGCGCCGACGGGGCGCCGAGCTTCCGCGAATCGGCGATCTTCATCGTCCGTTCGCCGACCTTCAGCGCAGCCTACC CCTGGCACCTCGTATTCCTCGGCAACAAGATGGACCCGCAAACCGGCGTCCGCACCTTCGCCAACTTCAACCAGAAATAC TGGCTGCCGGCCCGCCATCTCGAGGGCGGACGCCCGGAGATCGTCGAGCCCGAGGCGACCTGGGTGACGGTGTGGAAAAC GCGCAAGACCGAGGTCATCCTGTTCGTGCTGTGGCTCGCCGCGGCGGGTACCGTCTACGCGCTGCGCGACAAGCTCGTGC GTCGCGCCACCTACAAGGACCGCCGCTGGAAGGACGTCCCCAAGCTGCTGCTGTGGCTCACGTCGATCGGCTTCGTCGGC TTCTACCTGCTCGCCGTGCCGTCGATCACCCAGGTGCTGACCTGGTTCCACGCCATCCTGTTCGAATGGCGCTGGGAGCT GTTCCTGTCGGACCCGTTCATTTTCCTGTTCTGGATATTCATCATCGTCACCGTGTTCTTCTGGGGACGCGGGATGTTCT GCGGCTGGATGTGCCCCTACGGCTCGCTGTCCGAGATCGTCTACAAACTCTCCGGAAAACTCGGTCTCAAGCGTTTCCAG CGCCACCTGCTGCCGCAGCGCTGGCACGACCGGCTGAAATGGGTCAAGTACGGTGTCTTCGCGGTCCTGCTCGCGGTCTC CTTCTATTCGATGGGGATGGCCGAGAAGATGGCCGAGGTCGAGCCGTTCAAGACGACCTTCCTGGTCGGCGTATGGAACC GTACCTGGCCCTTCGTGACCTTCTGGCTGCTGCTGCTGCTCGCGTCGATGTTCTTCGAGCGCCCGTTCTGCAAATACCTG TGCCCGCTCGGCGCCGCGCTCGCCGTCCCTTCGACCTTCCGCTGGTGGGGGCTCAAGCGCAAGAAGGAATGCGGCCCCTG CGCGGCCTGCGCGGTCGGCTGCGGCTCGCAGGCGATCGACCCCTCGGGCCGTATCGACCAGCGCGAGTGTCTGCTCTGCC TCGATTGCCAGGTGTTGTATTACGACGACCACGCCTGCCCGCCCCTCGCCCAGGAGCGCAAGCGGCGCACCAAGGCGGGC GAACCGCTGACACCGATCGGCGCGAACGGCTACTTCATCCCGATCACGCCGGCGGCGGCGACGGTTGCGCCGGCTGCGGC CGTGCGCCAGAGCGCGCCGGCGTGGATCGGCCAGGAAGTGTTCGACCACCTGTTCCCATGGAGCCGCAAGGTGTTCCAGC AGCCGATCCTGCTGCAGGCGACGACCTTCGCTCTCACGATCCTCGTGACCTGGGTGTGGGTGCTCGGCGCCGCCGGCAGG ATCGGCCCTGGCATCGTGCTCGGCTGGTGGTCCGCCTGGAGCGTGTACGAACTCGTCGTACGCATGCGCTGCAAGCCCTA CGTCAAGGACGGCCCATGGTGGGGTCGCAACCTGCGCCCGGCCTCTTGGGCCGACATGGCGGCCTATGTCACCTTCAAGA ACCTGCTGATCGCGGCGACGCTGTTCCTGATCATGAAGGGGACCGGCGTACTCGACTACCTGAGCGACGTACCCGGACTC GAATGGCTCTACTGA
Upstream 100 bases:
>100_bases CTTCATCCTTGTACGGCCGTGTTGTCCTGCAGCAGCGTGCGGCACGCGCAAGGCAACAATCAGGTCAGCGGCTTCGCCGT GCCGGCCTACGGGATTCGTA
Downstream 100 bases:
>100_bases CGCGCGTCGCCGCCCTGCTCTGGCTGCTGAGCACCGGCGCGACGGCGGCCGAACTCACGGTAAGCCCGGGCCAGTCGATC GCGCAGGCGGTCGCGCGCGC
Product: transmembrane regulatory nosR transcription regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGADSFSKRMGKPAYVEAYANTS DSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSGKPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKF IKQYVGKFVGSKIEVGAGRPDQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEHAIFVVANGIESFKGSGFVRG GIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESAIFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKY WLPARHLEGGRPEIVEPEATWVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPYGSLSEIVYKLSGKLGLKRFQ RHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEVEPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYL CPLGAALAVPSTFRWWGLKRKKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQATTFALTILVTWVWVLGAAGR IGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRPASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGL EWLY
Sequences:
>Translated_884_residues MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGADSFSKRMGKPAYVEAYANTS DSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSGKPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKF IKQYVGKFVGSKIEVGAGRPDQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEHAIFVVANGIESFKGSGFVRG GIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESAIFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKY WLPARHLEGGRPEIVEPEATWVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPYGSLSEIVYKLSGKLGLKRFQ RHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEVEPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYL CPLGAALAVPSTFRWWGLKRKKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQATTFALTILVTWVWVLGAAGR IGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRPASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGL EWLY >Mature_884_residues MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGADSFSKRMGKPAYVEAYANTS DSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSGKPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKF IKQYVGKFVGSKIEVGAGRPDQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEHAIFVVANGIESFKGSGFVRG GIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESAIFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKY WLPARHLEGGRPEIVEPEATWVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPYGSLSEIVYKLSGKLGLKRFQ RHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEVEPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYL CPLGAALAVPSTFRWWGLKRKKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQATTFALTILVTWVWVLGAAGR IGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRPASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGL EWLY
Specific function: Transcriptional activator of the nitrous-oxide reductase gene nosZ [H]
COG id: COG3901
COG function: function code K; Regulator of nitric oxide reductase transcription
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787226, Length=190, Percent_Identity=30, Blast_Score=83, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007329 - InterPro: IPR011399 [H]
Pfam domain/function: PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 98851; Mature: 98851
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEECCCCCCEEECCHHHCCCCC DSFSKRMGKPAYVEAYANTSDSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSG CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCC KPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKFIKQYVGKFVGSKIEVGAGRP CCEEEEEECCCCCCHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCC DQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL CCCCEEEHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHH VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEH HCCCCCCEEEEEHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCE AIFVVANGIESFKGSGFVRGGIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESA EEEEEECCHHHHCCCCEEECCCHHHHHHHHCCCCCEECCCCEEEEEEEECCCCCCCCCCE IFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKYWLPARHLEGGRPEIVEPEAT EEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCHHHCCCCCCCEECCCCC WVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC GSLSEIVYKLSGKLGLKRFQRHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEV CCHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYLCPLGAALAVPSTFRWWGLKR CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCHHHHCCCC KKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG CCCCCCHHHHHHCCCCCCCCCCCCCCHHHEEEEEEEEEEEECCCCCCCHHHHHHHHHCCC EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQA CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCHHHHH TTFALTILVTWVWVLGAAGRIGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRP HHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGLEWLY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MKYFSAFASRLFASVLLCCASGLATAAESGATYEAPLPVQLSTDPDLCAYVPCKDVIPGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEECCCCCCEEECCHHHCCCCC DSFSKRMGKPAYVEAYANTSDSDDAPETDGAKASADENGRKLIGYVFLSTDIVDIPAYSG CHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCCCCC KPVVTLIGMDTKGTITGVRVLRHSEPILLLGIPESELTKFIKQYVGKFVGSKIEVGAGRP CCEEEEEECCCCCCHHHHHHEECCCCEEEEECCHHHHHHHHHHHHHHHCCCEEEECCCCC DQGVLGLDAITGATVTVIAQNQVVLRSGVQIAKQVGIIKPTIRPQAKFKQAEGNRDWNTL CCCCEEEHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHH VDEGSVEHLRVETADVGMPRSREPYIDMYFGYLNAPGVGRSILGDAVYEGLMSRLKPGEH HCCCCCCEEEEEHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCE AIFVVANGIESFKGSGFVRGGIYDRVQVAQDMDTFTFRDLDYLNLYAIRADGAPSFRESA EEEEEECCHHHHCCCCEEECCCHHHHHHHHCCCCCEECCCCEEEEEEEECCCCCCCCCCE IFIVRSPTFSAAYPWHLVFLGNKMDPQTGVRTFANFNQKYWLPARHLEGGRPEIVEPEAT EEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCEEECCHHHCCCCCCCEECCCCC WVTVWKTRKTEVILFVLWLAAAGTVYALRDKLVRRATYKDRRWKDVPKLLLWLTSIGFVG EEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FYLLAVPSITQVLTWFHAILFEWRWELFLSDPFIFLFWIFIIVTVFFWGRGMFCGWMCPY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC GSLSEIVYKLSGKLGLKRFQRHLLPQRWHDRLKWVKYGVFAVLLAVSFYSMGMAEKMAEV CCHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC EPFKTTFLVGVWNRTWPFVTFWLLLLLASMFFERPFCKYLCPLGAALAVPSTFRWWGLKR CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHCCCCHHHHCCCC KKECGPCAACAVGCGSQAIDPSGRIDQRECLLCLDCQVLYYDDHACPPLAQERKRRTKAG CCCCCCHHHHHHCCCCCCCCCCCCCCHHHEEEEEEEEEEEECCCCCCCHHHHHHHHHCCC EPLTPIGANGYFIPITPAAATVAPAAAVRQSAPAWIGQEVFDHLFPWSRKVFQQPILLQA CCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCHHHHH TTFALTILVTWVWVLGAAGRIGPGIVLGWWSAWSVYELVVRMRCKPYVKDGPWWGRNLRP HHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC ASWADMAAYVTFKNLLIAATLFLIMKGTGVLDYLSDVPGLEWLY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]