Click here to switch to the map view.

The map label for this gene is nosD [H]

Identifier: 74317409

GI number: 74317409

Start: 1473190

End: 1474458

Strand: Direct

Name: nosD [H]

Synonym: Tbd_1391

Alternate gene names: 74317409

Gene position: 1473190-1474458 (Clockwise)

Preceding gene: 74317408

Following gene: 74317410

Centisome position: 50.63

GC content: 65.01

Gene sequence:

>1269_bases
ATGGCTCTACTGACGCGCGTCGCCGCCCTGCTCTGGCTGCTGAGCACCGGCGCGACGGCGGCCGAACTCACGGTAAGCCC
GGGCCAGTCGATCGCGCAGGCGGTCGCGCGCGCAGCCCCGGGCGACGTGATCCGGATCGAGCGCGGCCACTACGAGGAAA
ACCTCCTGATCGAGAAGCCGCTGACGCTCAAAGGCATCGGCCGGCCGACAATCAGCGGCGGCCTCAAGGGCGACACGATC
CGCGTCACCGCCGAGGACGTCGTCATCGACGGACTGATCGTCAGCGACTCGGGCGACAGCCTGCTCGACCAGAACGCCGG
CGTCTACATCTACCCGGGCGCGCATCGCGCGGTCGTGCGCAACTGCGACCTGACCTACAACCTTTTCGGCTTGTGGATCG
AGAAAGCGAACGACGTCCGCATCGAAAACAATCTCATCACCGGCAAGCGCGACTACCGCTCGCCCCAGCGCGGCAACGGC
ATCCAGCTCTACAACACGACGGGCGCGCGCATCATCGGCAACCGCATCGGCTTCGTGCGCGACGCGATCTACGTCGACGT
CTCGCACCGCGCTATCTTCCGCGGCAACAGCCTGCATCACAGCCGCTACGGTACGCACTACATGAACTCCTACTACAACC
TGTGGGAGGACAACGACAGTTGGCGCAACCGCGGCGGACTCGCGCTCATGGAAGTGCGCGACCAGGTCGTGCGCAACAAC
CGCGCCTGGGGCAATTCCGACCATGGGATCATGCTGCGCACGATCCAGGACGCCGTCGTCGAGAACAACGTGGTCGCGGG
CAACGCGCGCGGATTCTTCATCTACGACGCCGAATACAACGTCCTGCGTGGTAACCTCGTCGTCGACAACGTCGTCGGCG
TCCACCTGTGGGCGGGCTCGATCAACAACACGGTCGAGGGCAACGACTTCATCTCCAACCGCGAGCAGGTCCGCTACGTT
GCGGCGCGTGACTCGGTCTGGGGCGGGAAGCTGGGCAACCACTGGAGCAATTACCTCGGCTGGGATCGCGACGGCGACGG
CGTCGGTGATGTGCGCTACGAAGCCAACGACGTCGTCGACCGGTTGTCGTGGCAGCATCCGATGATGAAACTGCTGCTCG
CCAGCCCTGCGGTGCAAACGCTGCGCATGGTCGGGCAGCAGTTCCCGCTGCTGCGCGCGCCGAGCATCGTCGATCCGCAC
CCGCGCATGCAGCCCGGACATACAAACTGGAGAATCTGGCTTGGCAAGTATTTCCCCGGCGCACGCTGA

Upstream 100 bases:

>100_bases
CCTATGTCACCTTCAAGAACCTGCTGATCGCGGCGACGCTGTTCCTGATCATGAAGGGGACCGGCGTACTCGACTACCTG
AGCGACGTACCCGGACTCGA

Downstream 100 bases:

>100_bases
GTCCCGCGCCACCCCGGCGCACGACAACGTCGTCGTCGCCCGCGCGGTTAGAAAACACTACGGCGCCGTCCACGCCGTCG
ACGGCGTCGATCTCGAAATC

Product: nitrous oxidase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MALLTRVAALLWLLSTGATAAELTVSPGQSIAQAVARAAPGDVIRIERGHYEENLLIEKPLTLKGIGRPTISGGLKGDTI
RVTAEDVVIDGLIVSDSGDSLLDQNAGVYIYPGAHRAVVRNCDLTYNLFGLWIEKANDVRIENNLITGKRDYRSPQRGNG
IQLYNTTGARIIGNRIGFVRDAIYVDVSHRAIFRGNSLHHSRYGTHYMNSYYNLWEDNDSWRNRGGLALMEVRDQVVRNN
RAWGNSDHGIMLRTIQDAVVENNVVAGNARGFFIYDAEYNVLRGNLVVDNVVGVHLWAGSINNTVEGNDFISNREQVRYV
AARDSVWGGKLGNHWSNYLGWDRDGDGVGDVRYEANDVVDRLSWQHPMMKLLLASPAVQTLRMVGQQFPLLRAPSIVDPH
PRMQPGHTNWRIWLGKYFPGAR

Sequences:

>Translated_422_residues
MALLTRVAALLWLLSTGATAAELTVSPGQSIAQAVARAAPGDVIRIERGHYEENLLIEKPLTLKGIGRPTISGGLKGDTI
RVTAEDVVIDGLIVSDSGDSLLDQNAGVYIYPGAHRAVVRNCDLTYNLFGLWIEKANDVRIENNLITGKRDYRSPQRGNG
IQLYNTTGARIIGNRIGFVRDAIYVDVSHRAIFRGNSLHHSRYGTHYMNSYYNLWEDNDSWRNRGGLALMEVRDQVVRNN
RAWGNSDHGIMLRTIQDAVVENNVVAGNARGFFIYDAEYNVLRGNLVVDNVVGVHLWAGSINNTVEGNDFISNREQVRYV
AARDSVWGGKLGNHWSNYLGWDRDGDGVGDVRYEANDVVDRLSWQHPMMKLLLASPAVQTLRMVGQQFPLLRAPSIVDPH
PRMQPGHTNWRIWLGKYFPGAR
>Mature_421_residues
ALLTRVAALLWLLSTGATAAELTVSPGQSIAQAVARAAPGDVIRIERGHYEENLLIEKPLTLKGIGRPTISGGLKGDTIR
VTAEDVVIDGLIVSDSGDSLLDQNAGVYIYPGAHRAVVRNCDLTYNLFGLWIEKANDVRIENNLITGKRDYRSPQRGNGI
QLYNTTGARIIGNRIGFVRDAIYVDVSHRAIFRGNSLHHSRYGTHYMNSYYNLWEDNDSWRNRGGLALMEVRDQVVRNNR
AWGNSDHGIMLRTIQDAVVENNVVAGNARGFFIYDAEYNVLRGNLVVDNVVGVHLWAGSINNTVEGNDFISNREQVRYVA
ARDSVWGGKLGNHWSNYLGWDRDGDGVGDVRYEANDVVDRLSWQHPMMKLLLASPAVQTLRMVGQQFPLLRAPSIVDPHP
RMQPGHTNWRIWLGKYFPGAR

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 47098; Mature: 46967

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLTRVAALLWLLSTGATAAELTVSPGQSIAQAVARAAPGDVIRIERGHYEENLLIEKP
CHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECC
LTLKGIGRPTISGGLKGDTIRVTAEDVVIDGLIVSDSGDSLLDQNAGVYIYPGAHRAVVR
CEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCHHHHCCCCEEEECCCCEEEEE
NCDLTYNLFGLWIEKANDVRIENNLITGKRDYRSPQRGNGIQLYNTTGARIIGNRIGFVR
CCCCEEEEEEEEEECCCCEEEECCEECCCHHCCCCCCCCCEEEEECCCCEEEHHHHHHEE
DAIYVDVSHRAIFRGNSLHHSRYGTHYMNSYYNLWEDNDSWRNRGGLALMEVRDQVVRNN
EEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCEEEHHHHHHHHHCC
RAWGNSDHGIMLRTIQDAVVENNVVAGNARGFFIYDAEYNVLRGNLVVDNVVGVHLWAGS
CCCCCCCCCEEEEEHHHHHHCCCEEECCCCEEEEECCCEEEEECCEEEECEEEEEEEECC
INNTVEGNDFISNREQVRYVAARDSVWGGKLGNHWSNYLGWDRDGDGVGDVRYEANDVVD
CCCCCCCCHHHCCHHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECHHHHHH
RLSWQHPMMKLLLASPAVQTLRMVGQQFPLLRAPSIVDPHPRMQPGHTNWRIWLGKYFPG
HHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
AR
CC
>Mature Secondary Structure 
ALLTRVAALLWLLSTGATAAELTVSPGQSIAQAVARAAPGDVIRIERGHYEENLLIEKP
HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECC
LTLKGIGRPTISGGLKGDTIRVTAEDVVIDGLIVSDSGDSLLDQNAGVYIYPGAHRAVVR
CEEECCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCHHHHCCCCEEEECCCCEEEEE
NCDLTYNLFGLWIEKANDVRIENNLITGKRDYRSPQRGNGIQLYNTTGARIIGNRIGFVR
CCCCEEEEEEEEEECCCCEEEECCEECCCHHCCCCCCCCCEEEEECCCCEEEHHHHHHEE
DAIYVDVSHRAIFRGNSLHHSRYGTHYMNSYYNLWEDNDSWRNRGGLALMEVRDQVVRNN
EEEEEEECCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCEEEHHHHHHHHHCC
RAWGNSDHGIMLRTIQDAVVENNVVAGNARGFFIYDAEYNVLRGNLVVDNVVGVHLWAGS
CCCCCCCCCEEEEEHHHHHHCCCEEECCCCEEEEECCCEEEEECCEEEECEEEEEEEECC
INNTVEGNDFISNREQVRYVAARDSVWGGKLGNHWSNYLGWDRDGDGVGDVRYEANDVVD
CCCCCCCCHHHCCHHHEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECHHHHHH
RLSWQHPMMKLLLASPAVQTLRMVGQQFPLLRAPSIVDPHPRMQPGHTNWRIWLGKYFPG
HHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
AR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]