| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317406
Identifier: 74317406
GI number: 74317406
Start: 1467589
End: 1468038
Strand: Reverse
Name: 74317406
Synonym: Tbd_1388
Alternate gene names: NA
Gene position: 1468038-1467589 (Counterclockwise)
Preceding gene: 74317416
Following gene: 74317405
Centisome position: 50.45
GC content: 68.22
Gene sequence:
>450_bases ATGCCGATAGGAGAGATCTGCAATCGCGAGGTCGTCGTCGCCGACACGTCGCTTTCCGTGACCGAAGCGGCGGGCCTGAT GCGCACCCACCACGTCGGCGACCTGGTCATCGTCGAAGACCGCGGGGGTCGGCGTCATCCGGTCGGCATCCTCACGGACC GCGACATCGCGGTCGAGGTCGTCGCCGCGGGGGTGAATCCCGAGGCGCTCACGGCCGGCGACATCATGGCGGCAGAGCTC GCGACCCTGGGCGAGAGCGAGGGCCTCTACGAGGCGCTGCGCTACATGCGCGACAAGGGCGTCCGGCGCATGCCCGTCGT CGATGGGGATGGCGCTCTCGTCGGCATCCTCACGCTCGACGACCTTCTCACGCTGTTCGCCGAAGAACTCACGAACGTCG CGAAGCTGCTGTCGCGCGAGCGCCAGCACGAAACCGACGTCCGCCGATGA
Upstream 100 bases:
>100_bases CATCTGGGGGCGCGCGCCGAGGGAGATACGTCCCCAAGTCGCCTTGCTTTTTCGCGGCCGCGCTCTTCAATACACGGAAA GGTGCGTGAGGGAAGGCCCC
Downstream 100 bases:
>100_bases CGCAAGCCACCGGCCCGGCCGCATCGCGTCAGCGCCGCCCGGGGGCGCACACACGACCTCGCGGCCCGTCTTCGCGTGGG ACAACGCCCCGCGTGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: OrfX [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEALTAGDIMAAEL ATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLDDLLTLFAEELTNVAKLLSRERQHETDVRR
Sequences:
>Translated_149_residues MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEALTAGDIMAAEL ATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLDDLLTLFAEELTNVAKLLSRERQHETDVRR >Mature_148_residues PIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEALTAGDIMAAELA TLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLDDLLTLFAEELTNVAKLLSRERQHETDVRR
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 16128; Mature: 15996
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEV CCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCEEEEE VAAGVNPEALTAGDIMAAELATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLD EEECCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCEECCCCCEEEEHHHH DLLTLFAEELTNVAKLLSRERQHETDVRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEV CCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCEEEEE VAAGVNPEALTAGDIMAAELATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLD EEECCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCEECCCCCEEEEHHHH DLLTLFAEELTNVAKLLSRERQHETDVRR HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014; 8522533 [H]