Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317406

Identifier: 74317406

GI number: 74317406

Start: 1467589

End: 1468038

Strand: Reverse

Name: 74317406

Synonym: Tbd_1388

Alternate gene names: NA

Gene position: 1468038-1467589 (Counterclockwise)

Preceding gene: 74317416

Following gene: 74317405

Centisome position: 50.45

GC content: 68.22

Gene sequence:

>450_bases
ATGCCGATAGGAGAGATCTGCAATCGCGAGGTCGTCGTCGCCGACACGTCGCTTTCCGTGACCGAAGCGGCGGGCCTGAT
GCGCACCCACCACGTCGGCGACCTGGTCATCGTCGAAGACCGCGGGGGTCGGCGTCATCCGGTCGGCATCCTCACGGACC
GCGACATCGCGGTCGAGGTCGTCGCCGCGGGGGTGAATCCCGAGGCGCTCACGGCCGGCGACATCATGGCGGCAGAGCTC
GCGACCCTGGGCGAGAGCGAGGGCCTCTACGAGGCGCTGCGCTACATGCGCGACAAGGGCGTCCGGCGCATGCCCGTCGT
CGATGGGGATGGCGCTCTCGTCGGCATCCTCACGCTCGACGACCTTCTCACGCTGTTCGCCGAAGAACTCACGAACGTCG
CGAAGCTGCTGTCGCGCGAGCGCCAGCACGAAACCGACGTCCGCCGATGA

Upstream 100 bases:

>100_bases
CATCTGGGGGCGCGCGCCGAGGGAGATACGTCCCCAAGTCGCCTTGCTTTTTCGCGGCCGCGCTCTTCAATACACGGAAA
GGTGCGTGAGGGAAGGCCCC

Downstream 100 bases:

>100_bases
CGCAAGCCACCGGCCCGGCCGCATCGCGTCAGCGCCGCCCGGGGGCGCACACACGACCTCGCGGCCCGTCTTCGCGTGGG
ACAACGCCCCGCGTGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: OrfX [H]

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEALTAGDIMAAEL
ATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLDDLLTLFAEELTNVAKLLSRERQHETDVRR

Sequences:

>Translated_149_residues
MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEALTAGDIMAAEL
ATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLDDLLTLFAEELTNVAKLLSRERQHETDVRR
>Mature_148_residues
PIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEALTAGDIMAAELA
TLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLDDLLTLFAEELTNVAKLLSRERQHETDVRR

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 16128; Mature: 15996

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEV
CCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCEEEEE
VAAGVNPEALTAGDIMAAELATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLD
EEECCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCEECCCCCEEEEHHHH
DLLTLFAEELTNVAKLLSRERQHETDVRR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEV
CCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCEEEEE
VAAGVNPEALTAGDIMAAELATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGILTLD
EEECCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCEECCCCCEEEEHHHH
DLLTLFAEELTNVAKLLSRERQHETDVRR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014; 8522533 [H]