Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317405

Identifier: 74317405

GI number: 74317405

Start: 1466682

End: 1467269

Strand: Reverse

Name: 74317405

Synonym: Tbd_1387

Alternate gene names: NA

Gene position: 1467269-1466682 (Counterclockwise)

Preceding gene: 74317406

Following gene: 74317398

Centisome position: 50.42

GC content: 66.33

Gene sequence:

>588_bases
ATGGCGCTTTATCATCCCGATATCCCAAGCACGGCCCAGGTCGCGGGGCACCCGATCCACCCCATGCTCGTTCCGTTCCC
GATCGCCTTTCTGGTCACTGCACTGATCACGGACCTGACCTATCTCAATACCGAGGATCCATTCTGGGCGCTGGCTTCGC
TGTGGCTGCTGCGCGCGGGCCTCGTGATGGGCATCCTCGCGGCCGTGTTCGGTCTGGTCGACTTCTATTCGCGGCGCACG
ATCCGCGACCACAAGATCGCCTGGTACCACTTCATCGGCAACGCGACGGTACTGATCCTTGCATGGGTCAACGTCTCGAT
GCGCAACGAGGCGCCAATCGACGGCCTCACCCCCGCCGGGATCACGCTTTCGGCCGTGGTCGCCGGCATTTTGCTCGTCA
CGGCCTGGCTTGGCGGCGAGATGGCCTACCGACATCACATCGGCGCGGTTCCCGCCGCGCGCGAATCGGTGACCGTCGAA
CGAACGCCGCCGGGGGCGCGGCCGTCGACGATGGCGTCGAGCTACGTCCCGGCCGGGCACGAACGTCGCACCGGACCGGG
AGACCGCCGCAACCACGTCGCCGCCTGA

Upstream 100 bases:

>100_bases
CCGTGCGGTTGCATGTTCATGCCCGCGTCCTATTCTTCCATCCTGTTCTCCACCGCCGGCATGCGCTGGCGTCCCGGTCA
AAGCGTAAAGGAGGTGTGCG

Downstream 100 bases:

>100_bases
ACGGCGGGAGTGGGCACGTACGTTTGCATATGTCCGGGCGTTCAGCAGATGCGCGGTAACGGATCGTCTTCCAGTTCGTC
GATCACGCGGCGCCCGCCGA

Product: membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MALYHPDIPSTAQVAGHPIHPMLVPFPIAFLVTALITDLTYLNTEDPFWALASLWLLRAGLVMGILAAVFGLVDFYSRRT
IRDHKIAWYHFIGNATVLILAWVNVSMRNEAPIDGLTPAGITLSAVVAGILLVTAWLGGEMAYRHHIGAVPAARESVTVE
RTPPGARPSTMASSYVPAGHERRTGPGDRRNHVAA

Sequences:

>Translated_195_residues
MALYHPDIPSTAQVAGHPIHPMLVPFPIAFLVTALITDLTYLNTEDPFWALASLWLLRAGLVMGILAAVFGLVDFYSRRT
IRDHKIAWYHFIGNATVLILAWVNVSMRNEAPIDGLTPAGITLSAVVAGILLVTAWLGGEMAYRHHIGAVPAARESVTVE
RTPPGARPSTMASSYVPAGHERRTGPGDRRNHVAA
>Mature_194_residues
ALYHPDIPSTAQVAGHPIHPMLVPFPIAFLVTALITDLTYLNTEDPFWALASLWLLRAGLVMGILAAVFGLVDFYSRRTI
RDHKIAWYHFIGNATVLILAWVNVSMRNEAPIDGLTPAGITLSAVVAGILLVTAWLGGEMAYRHHIGAVPAARESVTVER
TPPGARPSTMASSYVPAGHERRTGPGDRRNHVAA

Specific function: Unknown

COG id: COG4244

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21121; Mature: 20990

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALYHPDIPSTAQVAGHPIHPMLVPFPIAFLVTALITDLTYLNTEDPFWALASLWLLRAG
CCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LVMGILAAVFGLVDFYSRRTIRDHKIAWYHFIGNATVLILAWVNVSMRNEAPIDGLTPAG
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
ITLSAVVAGILLVTAWLGGEMAYRHHIGAVPAARESVTVERTPPGARPSTMASSYVPAGH
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCC
ERRTGPGDRRNHVAA
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALYHPDIPSTAQVAGHPIHPMLVPFPIAFLVTALITDLTYLNTEDPFWALASLWLLRAG
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
LVMGILAAVFGLVDFYSRRTIRDHKIAWYHFIGNATVLILAWVNVSMRNEAPIDGLTPAG
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC
ITLSAVVAGILLVTAWLGGEMAYRHHIGAVPAARESVTVERTPPGARPSTMASSYVPAGH
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHCCCCCC
ERRTGPGDRRNHVAA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA