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The map label for this gene is 74317416

Identifier: 74317416

GI number: 74317416

Start: 1478065

End: 1478550

Strand: Reverse

Name: 74317416

Synonym: Tbd_1398

Alternate gene names: NA

Gene position: 1478550-1478065 (Counterclockwise)

Preceding gene: 74317417

Following gene: 74317406

Centisome position: 50.81

GC content: 68.93

Gene sequence:

>486_bases
ATGAAGATGACCTCGCTTGCACTCGCCTTGTCTTTGGCGGCCTTGCTCAGCGCTTGCGGCGACAAGGAAGCAGAGACCCC
GGAAACGGCAGCGCCTGAAATGAGCGCACCGGCGCCCGAGGCCGCCGCACCCGAAGCAGCGGCACCTGAGGCAGCCGCAC
CGGAGGCCGCGCCTGCGCCGGAGGCTGCCGCCCCCGCCGCTCCGGCCGAAGGTGAGGCAGTCGCCGCGGCAGGCGACGTC
GGCAAGAAGGTCTACGGCAACGTGTGCTCGATGTGCCACGCTGCAGGCGTGGCCGGCGCGCCGAAGCCGGGCGACAAGGC
CGAGTGGGGCCCCCGCATCGCCCAGGGCAACGACGTGCTCTACAAGCACGCGATCGAAGGCTTCACCGGCAAGAAAGGCA
TGATGCCCGCGCGCGGCGGCTCGACGACGCTGTCGGACGACGAAGTCAAGGCTGCAGTCGACTTCATGGTTGCGCAGTCG
AAGTAA

Upstream 100 bases:

>100_bases
GCGCCGAATAAAGCCTGGGCCCGCCCGCGAGGATGGAACCCGTTGCATCGGCCAGACTTATTCCCAGCTTTTCAAACCCG
ATCTACAGGAGATATGAACG

Downstream 100 bases:

>100_bases
GCCGCTTCGAAAACCGCGGCTTCGAAAAAAACGGAGGAGACCTGGTCTCCTCCGTTTTTTTTTGGTCCGAGAATTCGTGG
GGCGCTCGCCGGCCTAGTGG

Product: putative cytochrome c-type protein

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKMTSLALALSLAALLSACGDKEAETPETAAPEMSAPAPEAAAPEAAAPEAAAPEAAPAPEAAAPAAPAEGEAVAAAGDV
GKKVYGNVCSMCHAAGVAGAPKPGDKAEWGPRIAQGNDVLYKHAIEGFTGKKGMMPARGGSTTLSDDEVKAAVDFMVAQS
K

Sequences:

>Translated_161_residues
MKMTSLALALSLAALLSACGDKEAETPETAAPEMSAPAPEAAAPEAAAPEAAAPEAAPAPEAAAPAAPAEGEAVAAAGDV
GKKVYGNVCSMCHAAGVAGAPKPGDKAEWGPRIAQGNDVLYKHAIEGFTGKKGMMPARGGSTTLSDDEVKAAVDFMVAQS
K
>Mature_161_residues
MKMTSLALALSLAALLSACGDKEAETPETAAPEMSAPAPEAAAPEAAAPEAAAPEAAPAPEAAAPAAPAEGEAVAAAGDV
GKKVYGNVCSMCHAAGVAGAPKPGDKAEWGPRIAQGNDVLYKHAIEGFTGKKGMMPARGGSTTLSDDEVKAAVDFMVAQS
K

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 15843; Mature: 15843

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMTSLALALSLAALLSACGDKEAETPETAAPEMSAPAPEAAAPEAAAPEAAAPEAAPAP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EAAAPAAPAEGEAVAAAGDVGKKVYGNVCSMCHAAGVAGAPKPGDKAEWGPRIAQGNDVL
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
YKHAIEGFTGKKGMMPARGGSTTLSDDEVKAAVDFMVAQSK
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMTSLALALSLAALLSACGDKEAETPETAAPEMSAPAPEAAAPEAAAPEAAAPEAAPAP
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EAAAPAAPAEGEAVAAAGDVGKKVYGNVCSMCHAAGVAGAPKPGDKAEWGPRIAQGNDVL
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
YKHAIEGFTGKKGMMPARGGSTTLSDDEVKAAVDFMVAQSK
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]