Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317299

Identifier: 74317299

GI number: 74317299

Start: 1347466

End: 1348752

Strand: Reverse

Name: 74317299

Synonym: Tbd_1281

Alternate gene names: NA

Gene position: 1348752-1347466 (Counterclockwise)

Preceding gene: 74317300

Following gene: 74317297

Centisome position: 46.35

GC content: 66.98

Gene sequence:

>1287_bases
ATGACAGCTTCGCAGGCCGCAACGACACGACGGGAAGACGCACGCGTCTTCTGGGCCGACGCCTACCTTGCCGTGCGCCA
GCGCAGCAAGGCGCTCTGCGCGCCGCTCGCCGCCGAGGACTACGTGATCCAGACCGCCCCCGAGGCGAGCCCCGCAAAAT
GGCATCTCGCACACGTGAGCTGGTTCTTCGAGACCTTTCTGCTGCGCGACTATCTTGCCGGTTACCGCGACTTCCATCCG
CGCTTCGGCTATCTCTTCAATTCGTATTACGAGCAGGTCGGCGAATTCCATCCTCGTGCGCACCGCGGCTTCCTGTCGCG
TCCGAGCGTCGAGGAAATCCTTCGCTATCGTGCCCACGTCGACGAAGCGATGCTCAAACTCATGCAAGGCGCCGGCGGCG
CCGTCTGGCCCGAAATCGAGAAGCGCCTCGCGATCGGCCTCAATCACGAGCAACAGCATCAGGAACTGCTGTTGACCGAT
CTCAAGCTCAATCTCTACGCCAATCCGCTGCGCCCGGCGTACCGCGACGACCTGCCCGCCGTGCCCGGCGGGCTCGCGCC
GGACCTCGGCTGGCAGTCTTTTCCGGGCGGCGTGCACGAGATGGGCGCGCGCGGCGACGGTTTCGCCTACGACAACGAAA
TGCCGCGCCACCGCAGCTATGTCGAGCCCTTCCACCTGGCGACGCGCCTCGTCACCAACGGCGAGTATCTCGGTTTCATC
GACGACGGCGGCTACGTCAATCCCGCGCTTTGGCTCGCCGACGGCTGGGCCACGCTCAAGCGTCTCGGCTGGAGCGGCCC
GCTCTACTGGGAGCGGGTCGACGGCGTGTGGCAGCAATACACGCTCGGCGGCGTGCGCCGGCTCGACCCCGAGCAGCCGC
TCTGTCACGTCAGCTACTACGAGGCGGAGGCCTACGCGACCTGGGCCGGCAAGCGGCTGCCGACCGAAGTCGAATGGGAA
ATCGGTGCAGCGGGCCTTCCGGTGCGCGGCAATCTGCGCGACGCCGGCCACTTCCATCCCGTCGTCGCGCCGACCGGCGG
CGGCCTGCTGCAGATGTTCGGCGACGTCTGGGAGCACACGGGCTCGGCCTACCTGCCTTATCCCGGCTTTCGCACCGCGC
CCGGCGCCCTCGGCGAATACAACGGCAAGTTCATGTGCGGTCAGATGGTCCTGCGCGGCGGTTCGTGCGTGACCCCGGCC
GACCACATCCGCGCGAGCTACCGCAACTTCTTCTATCCGCACGAACGCTGGCAGTTCCAGGGCATCCGGCTCGCCGACGA
CGCGTAG

Upstream 100 bases:

>100_bases
GCCACCTATGATCGGAGGGGCAGCGTCGCGGCCGAGCCAAGCCGCATTCTCCACGCGCCCGCCCCCTTCCCACGAACCCT
CGAACCCCTCAGGAGGCGCG

Downstream 100 bases:

>100_bases
CCGGCGCGGCTCAGCGCGTCGCCGCCGCAACCGCCGCGACCGCGGTGTCGAGTTGCTCGCGAGTGAGGTAGAAGTGCGGC
GAGAAACGCACGCCGCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVSWFFETFLLRDYLAGYRDFHP
RFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHVDEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTD
LKLNLYANPLRPAYRDDLPAVPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI
DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYYEAEAYATWAGKRLPTEVEWE
IGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHTGSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPA
DHIRASYRNFFYPHERWQFQGIRLADDA

Sequences:

>Translated_428_residues
MTASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVSWFFETFLLRDYLAGYRDFHP
RFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHVDEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTD
LKLNLYANPLRPAYRDDLPAVPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI
DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYYEAEAYATWAGKRLPTEVEWE
IGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHTGSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPA
DHIRASYRNFFYPHERWQFQGIRLADDA
>Mature_427_residues
TASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVSWFFETFLLRDYLAGYRDFHPR
FGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHVDEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTDL
KLNLYANPLRPAYRDDLPAVPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFID
DGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYYEAEAYATWAGKRLPTEVEWEI
GAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHTGSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPAD
HIRASYRNFFYPHERWQFQGIRLADDA

Specific function: Unknown

COG id: COG1262

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI257470975, Length=267, Percent_Identity=27.3408239700375, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI38202250, Length=279, Percent_Identity=26.1648745519713, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI257470977, Length=209, Percent_Identity=28.2296650717703, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48338; Mature: 48207

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVS
CCCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEHHHHH
WFFETFLLRDYLAGYRDFHPRFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHH
DEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTDLKLNLYANPLRPAYRDDLPA
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEECCCCCHHHCCCCC
VPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHEECCCEEEEE
DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYY
CCCCEECCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
EAEAYATWAGKRLPTEVEWEIGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHT
EHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHC
GSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPADHIRASYRNFFYPHERWQFQ
CCEECCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEC
GIRLADDA
CEEECCCC
>Mature Secondary Structure 
TASQAATTRREDARVFWADAYLAVRQRSKALCAPLAAEDYVIQTAPEASPAKWHLAHVS
CCCHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEEHHHHH
WFFETFLLRDYLAGYRDFHPRFGYLFNSYYEQVGEFHPRAHRGFLSRPSVEEILRYRAHV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHH
DEAMLKLMQGAGGAVWPEIEKRLAIGLNHEQQHQELLLTDLKLNLYANPLRPAYRDDLPA
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEECCCCCHHHCCCCC
VPGGLAPDLGWQSFPGGVHEMGARGDGFAYDNEMPRHRSYVEPFHLATRLVTNGEYLGFI
CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCHHHHHHHHEECCCEEEEE
DDGGYVNPALWLADGWATLKRLGWSGPLYWERVDGVWQQYTLGGVRRLDPEQPLCHVSYY
CCCCEECCEEEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
EAEAYATWAGKRLPTEVEWEIGAAGLPVRGNLRDAGHFHPVVAPTGGGLLQMFGDVWEHT
EHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHC
GSAYLPYPGFRTAPGALGEYNGKFMCGQMVLRGGSCVTPADHIRASYRNFFYPHERWQFQ
CCEECCCCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEC
GIRLADDA
CEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA