| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317297
Identifier: 74317297
GI number: 74317297
Start: 1345136
End: 1346125
Strand: Reverse
Name: 74317297
Synonym: Tbd_1279
Alternate gene names: NA
Gene position: 1346125-1345136 (Counterclockwise)
Preceding gene: 74317299
Following gene: 74317296
Centisome position: 46.26
GC content: 67.58
Gene sequence:
>990_bases ATGACGAAAACACGCCGCTTGATCCTGTTGCTCATCGCCGCCTCGGCATCGCATCCCACCTATGCCGCCTCCGAGGCGCC CGGAACTTTGAGCTTCGTGCTCGAGAACGACTGGTTCAACGGCAGTGACAGCCACTACACGAACGGTTTCAGCGTCGGCT GGGTGCCGGGCGACGCTGCCCCGCCACCGCAGTGGGCCGTGAACCTCGCGCGCCTGATGCCATGGTTCCCGCAGCACGGC GAGGTACGGCACGGCTACGCATTCGGCCAGAGCACCTTCGTGCCGAGCGACATCACGGTCGCCGACCCGCCCTTGACCGA CCGCCCCTACGCCGGCTGGCTCTACGCCTCGCTCGGCCTCGCCGCCGACTCGGGTTCGACGCTCGACCAGTTCGGCGTCA CGGTTGGCGTGGTCGGTCCCGCCTCTTTCGCCGAGGACACGCAGAAATTCTTCCACGAGGCTCTCGGCTCCGACGACCCG CAGGGCTGGGACACGCAACTCGAGAACGAGCCCGGCATCGTCCTGACCTATCAGCGCAGCTGGCGCGGGCCGGCGACGGG CGACGCCAGCGGCCCCCGGTTCGACCTCATTCCCCACGCCGGCGCGGCGCTCGGGAACGTCTACACCTACGCCAACGCCG GCGTCACGCTGCGCTACGGCAAGCAGCTTCCGAACGACTATGGCGCGCCCTACGTTCGCCAGGGCCTGCCCGCCGCGGCC CGTTTCAGTCCGGCCTCGGATTTCGGCTGGTATGTGTTCGCCGGCGTCGAGGGCCGCGCCGTGGCACAGAACATCTTCCT CGACGGCAACACCTTCCGCGACAGCCGCAGCGTCGACAAGAAGCCCTTCGTCGGCGATCTCCAGTTCGGCTTCGTACTCG ACTGGCCCGACGTGCGGGTGAGCTACACCCACGTCCTGCGCACGCGCGAGTTCCGGACCCAGGAGGATAACGATGGCTAT GGTGCGGTCAGCGTGTCGCTCAAGTTCTAG
Upstream 100 bases:
>100_bases GATCATACGACAGCCCGCTTCCTGTGCAGGCGCGCCTTGCGCGACGCCTCACCAGGCTGCGCGGCTTTGCTAGGCTGAAG AAAAACCCTTGGAATACGAC
Downstream 100 bases:
>100_bases CGGCAGACGCGCCGGCCGCCCCTGCCCGCGGGGCTCGCCGAAACTGGCATAATCGGATCTGTCTGCCCGCCGCCTGCCCA TGAACCTCGATTCCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTKTRRLILLLIAASASHPTYAASEAPGTLSFVLENDWFNGSDSHYTNGFSVGWVPGDAAPPPQWAVNLARLMPWFPQHG EVRHGYAFGQSTFVPSDITVADPPLTDRPYAGWLYASLGLAADSGSTLDQFGVTVGVVGPASFAEDTQKFFHEALGSDDP QGWDTQLENEPGIVLTYQRSWRGPATGDASGPRFDLIPHAGAALGNVYTYANAGVTLRYGKQLPNDYGAPYVRQGLPAAA RFSPASDFGWYVFAGVEGRAVAQNIFLDGNTFRDSRSVDKKPFVGDLQFGFVLDWPDVRVSYTHVLRTREFRTQEDNDGY GAVSVSLKF
Sequences:
>Translated_329_residues MTKTRRLILLLIAASASHPTYAASEAPGTLSFVLENDWFNGSDSHYTNGFSVGWVPGDAAPPPQWAVNLARLMPWFPQHG EVRHGYAFGQSTFVPSDITVADPPLTDRPYAGWLYASLGLAADSGSTLDQFGVTVGVVGPASFAEDTQKFFHEALGSDDP QGWDTQLENEPGIVLTYQRSWRGPATGDASGPRFDLIPHAGAALGNVYTYANAGVTLRYGKQLPNDYGAPYVRQGLPAAA RFSPASDFGWYVFAGVEGRAVAQNIFLDGNTFRDSRSVDKKPFVGDLQFGFVLDWPDVRVSYTHVLRTREFRTQEDNDGY GAVSVSLKF >Mature_328_residues TKTRRLILLLIAASASHPTYAASEAPGTLSFVLENDWFNGSDSHYTNGFSVGWVPGDAAPPPQWAVNLARLMPWFPQHGE VRHGYAFGQSTFVPSDITVADPPLTDRPYAGWLYASLGLAADSGSTLDQFGVTVGVVGPASFAEDTQKFFHEALGSDDPQ GWDTQLENEPGIVLTYQRSWRGPATGDASGPRFDLIPHAGAALGNVYTYANAGVTLRYGKQLPNDYGAPYVRQGLPAAAR FSPASDFGWYVFAGVEGRAVAQNIFLDGNTFRDSRSVDKKPFVGDLQFGFVLDWPDVRVSYTHVLRTREFRTQEDNDGYG AVSVSLKF
Specific function: Unknown
COG id: COG3528
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35828; Mature: 35697
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00485 A_DEAMINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTRRLILLLIAASASHPTYAASEAPGTLSFVLENDWFNGSDSHYTNGFSVGWVPGDAA CCCCCEEEEEEEECCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC PPPQWAVNLARLMPWFPQHGEVRHGYAFGQSTFVPSDITVADPPLTDRPYAGWLYASLGL CCHHHHHHHHHHCCCCCCCCCEECCEECCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEE AADSGSTLDQFGVTVGVVGPASFAEDTQKFFHEALGSDDPQGWDTQLENEPGIVLTYQRS ECCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC WRGPATGDASGPRFDLIPHAGAALGNVYTYANAGVTLRYGKQLPNDYGAPYVRQGLPAAA CCCCCCCCCCCCEEEECCCCCHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHHCCCCHH RFSPASDFGWYVFAGVEGRAVAQNIFLDGNTFRDSRSVDKKPFVGDLQFGFVLDWPDVRV CCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEE SYTHVLRTREFRTQEDNDGYGAVSVSLKF EHHHHHHHHHHCCCCCCCCCEEEEEEEEC >Mature Secondary Structure TKTRRLILLLIAASASHPTYAASEAPGTLSFVLENDWFNGSDSHYTNGFSVGWVPGDAA CCCCEEEEEEEECCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC PPPQWAVNLARLMPWFPQHGEVRHGYAFGQSTFVPSDITVADPPLTDRPYAGWLYASLGL CCHHHHHHHHHHCCCCCCCCCEECCEECCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEE AADSGSTLDQFGVTVGVVGPASFAEDTQKFFHEALGSDDPQGWDTQLENEPGIVLTYQRS ECCCCCCHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCC WRGPATGDASGPRFDLIPHAGAALGNVYTYANAGVTLRYGKQLPNDYGAPYVRQGLPAAA CCCCCCCCCCCCEEEECCCCCHHHCCEEEEECCCEEEEECCCCCCCCCCCHHHHCCCCHH RFSPASDFGWYVFAGVEGRAVAQNIFLDGNTFRDSRSVDKKPFVGDLQFGFVLDWPDVRV CCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEE SYTHVLRTREFRTQEDNDGYGAVSVSLKF EHHHHHHHHHHCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA