| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317236
Identifier: 74317236
GI number: 74317236
Start: 1272703
End: 1273059
Strand: Reverse
Name: 74317236
Synonym: Tbd_1218
Alternate gene names: NA
Gene position: 1273059-1272703 (Counterclockwise)
Preceding gene: 74317237
Following gene: 74317230
Centisome position: 43.75
GC content: 61.62
Gene sequence:
>357_bases ATGAACACGAGCCCCGACAACGGCGTCGCCGACGACGCGAAGCTCGCGAGCCTGAAGTCCCTGACGACGGTGACCTACGC GCTCTACGCGCTGTCGCTGGTCGTCGGCGTGACCGCGATCGTCGCGATCGTGTTGAACTACATCAAGAAGGACGACGCCC GCGGCACCTGGCTCGAGAGCCACTTCACCTGGCAGATCCGCACTTTCTGGTGGAGCGTCGTCTGGTTCGTGCTCGGCTCG ATCACGGTTTTCATCCTAATCGGCTGGGTCGTCCTCGGCGTCGCCTACGTCTGGTTCATCTACCGCATCGCCAAGGGCTG GCTCAACCTCAACGACAACAAGCCAATGGCCTTGTAA
Upstream 100 bases:
>100_bases CGCCGCAATTCCTCAGCACCCACCCCGCGCCGGGCAATCGCATCCAGGCGCTCAACGCACTCGTGCCACAGATGATGCCG ATCTACGAGAAGGCGCGTCG
Downstream 100 bases:
>100_bases GCCTGCGCCGGGCTGGCGACCCGCCCGTCCGCAGCTACGAAATCCGCACCTCGGTCCCGACTTCGACGAGCTCGAAAAGC TCGGCGACGTCGGCGTTCTT
Product: transmembrane protein
Products: NA
Alternate protein names: DNAJ Domain Protein; Chaperone Protein DNAJ
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNTSPDNGVADDAKLASLKSLTTVTYALYALSLVVGVTAIVAIVLNYIKKDDARGTWLESHFTWQIRTFWWSVVWFVLGS ITVFILIGWVVLGVAYVWFIYRIAKGWLNLNDNKPMAL
Sequences:
>Translated_118_residues MNTSPDNGVADDAKLASLKSLTTVTYALYALSLVVGVTAIVAIVLNYIKKDDARGTWLESHFTWQIRTFWWSVVWFVLGS ITVFILIGWVVLGVAYVWFIYRIAKGWLNLNDNKPMAL >Mature_118_residues MNTSPDNGVADDAKLASLKSLTTVTYALYALSLVVGVTAIVAIVLNYIKKDDARGTWLESHFTWQIRTFWWSVVWFVLGS ITVFILIGWVVLGVAYVWFIYRIAKGWLNLNDNKPMAL
Specific function: Unknown
COG id: COG3671
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13314; Mature: 13314
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSPDNGVADDAKLASLKSLTTVTYALYALSLVVGVTAIVAIVLNYIKKDDARGTWLES CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH HFTWQIRTFWWSVVWFVLGSITVFILIGWVVLGVAYVWFIYRIAKGWLNLNDNKPMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNTSPDNGVADDAKLASLKSLTTVTYALYALSLVVGVTAIVAIVLNYIKKDDARGTWLES CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHH HFTWQIRTFWWSVVWFVLGSITVFILIGWVVLGVAYVWFIYRIAKGWLNLNDNKPMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA