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The map label for this gene is yfgC [H]

Identifier: 74317237

GI number: 74317237

Start: 1273056

End: 1273832

Strand: Reverse

Name: yfgC [H]

Synonym: Tbd_1219

Alternate gene names: 74317237

Gene position: 1273832-1273056 (Counterclockwise)

Preceding gene: 74317238

Following gene: 74317236

Centisome position: 43.78

GC content: 68.08

Gene sequence:

>777_bases
ATGAACCGCAAACTCGTCGTGACCGCGCTGCTCGCCGCCAGCCTCCTCGGCTGCGAGGCGAACCCCGTGTCGGGCCGCAA
GCAGCTCGTGCTGGTGTCCGAAGAACAGGCCCAGGCCTCGTCGGCGCAGGCCTACGTGCAGACGATCAGCGCGGCGCAGA
AGCAGGGCAAGCTCAGCACCGACACCGCGCTGAACGCCCGCGTCAAGCGCATCACCGACCGTCTGGTGACCCAGGCCGAG
GCCATGTACCCACCGAGCCGCGACTGGAAATGGTCGGTCGCGGTCATCGACGAGCCGACGCTCAACGCCTGGTGCATGCC
GGGCGGCAAGATGGCGATCTATACCGGCATCGTGCGCAAACTCAACCTGACCGACGACGAAATCGCCCAGATCATGGGCC
ACGAGATCACCCACGCCCTGCTCGGCCACGGCCGCGAGCGCATGTCGCGCGCAATTGCGATGCAGGGCGGCATGGCGCTT
GGCTCGATCGTCTCGGGGCGCGACCTGAGCATTCTCGCGCCCGTCGCCGACGTCGCAATCACGCTGCCGAACAGCCGCGA
GGGCGAAACCGAAGCCGACCGCTATGGCCTCGAGCTCGCCGCGCGCGCCGGCTTCGACCCGCGCGCCGCCGTGCGCCTGT
GGGAGAAAATGAGTCAGGCGAGCGGCAACGGCCCGCCGCAATTCCTCAGCACCCACCCCGCGCCGGGCAATCGCATCCAG
GCGCTCAACGCACTCGTGCCACAGATGATGCCGATCTACGAGAAGGCGCGTCGATGA

Upstream 100 bases:

>100_bases
CGCGGAATCTGAGTCTGAATGAACGCGGCGCCTGCCCGGCGTTCGCCCGGGGCATCAGCCGCGACGAAGCTGCACCCCTG
ATCTTCCTCAAGGAGCGACC

Downstream 100 bases:

>100_bases
ACACGAGCCCCGACAACGGCGTCGCCGACGACGCGAAGCTCGCGAGCCTGAAGTCCCTGACGACGGTGACCTACGCGCTC
TACGCGCTGTCGCTGGTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNRKLVVTALLAASLLGCEANPVSGRKQLVLVSEEQAQASSAQAYVQTISAAQKQGKLSTDTALNARVKRITDRLVTQAE
AMYPPSRDWKWSVAVIDEPTLNAWCMPGGKMAIYTGIVRKLNLTDDEIAQIMGHEITHALLGHGRERMSRAIAMQGGMAL
GSIVSGRDLSILAPVADVAITLPNSREGETEADRYGLELAARAGFDPRAAVRLWEKMSQASGNGPPQFLSTHPAPGNRIQ
ALNALVPQMMPIYEKARR

Sequences:

>Translated_258_residues
MNRKLVVTALLAASLLGCEANPVSGRKQLVLVSEEQAQASSAQAYVQTISAAQKQGKLSTDTALNARVKRITDRLVTQAE
AMYPPSRDWKWSVAVIDEPTLNAWCMPGGKMAIYTGIVRKLNLTDDEIAQIMGHEITHALLGHGRERMSRAIAMQGGMAL
GSIVSGRDLSILAPVADVAITLPNSREGETEADRYGLELAARAGFDPRAAVRLWEKMSQASGNGPPQFLSTHPAPGNRIQ
ALNALVPQMMPIYEKARR
>Mature_258_residues
MNRKLVVTALLAASLLGCEANPVSGRKQLVLVSEEQAQASSAQAYVQTISAAQKQGKLSTDTALNARVKRITDRLVTQAE
AMYPPSRDWKWSVAVIDEPTLNAWCMPGGKMAIYTGIVRKLNLTDDEIAQIMGHEITHALLGHGRERMSRAIAMQGGMAL
GSIVSGRDLSILAPVADVAITLPNSREGETEADRYGLELAARAGFDPRAAVRLWEKMSQASGNGPPQFLSTHPAPGNRIQ
ALNALVPQMMPIYEKARR

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=251, Percent_Identity=33.0677290836653, Blast_Score=124, Evalue=1e-28,
Organism=Escherichia coli, GI1788840, Length=211, Percent_Identity=29.8578199052133, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87082185, Length=247, Percent_Identity=26.7206477732794, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87081800, Length=146, Percent_Identity=28.7671232876712, Blast_Score=72, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322940, Length=251, Percent_Identity=31.4741035856574, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 27897; Mature: 27897

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKLVVTALLAASLLGCEANPVSGRKQLVLVSEEQAQASSAQAYVQTISAAQKQGKLST
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC
DTALNARVKRITDRLVTQAEAMYPPSRDWKWSVAVIDEPTLNAWCMPGGKMAIYTGIVRK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHH
LNLTDDEIAQIMGHEITHALLGHGRERMSRAIAMQGGMALGSIVSGRDLSILAPVADVAI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEECHHHEEE
TLPNSREGETEADRYGLELAARAGFDPRAAVRLWEKMSQASGNGPPQFLSTHPAPGNRIQ
ECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ALNALVPQMMPIYEKARR
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRKLVVTALLAASLLGCEANPVSGRKQLVLVSEEQAQASSAQAYVQTISAAQKQGKLST
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCC
DTALNARVKRITDRLVTQAEAMYPPSRDWKWSVAVIDEPTLNAWCMPGGKMAIYTGIVRK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCCCCCHHHHHHHHH
LNLTDDEIAQIMGHEITHALLGHGRERMSRAIAMQGGMALGSIVSGRDLSILAPVADVAI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCEEEECHHHEEE
TLPNSREGETEADRYGLELAARAGFDPRAAVRLWEKMSQASGNGPPQFLSTHPAPGNRIQ
ECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
ALNALVPQMMPIYEKARR
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]