Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317230

Identifier: 74317230

GI number: 74317230

Start: 1268074

End: 1268997

Strand: Reverse

Name: 74317230

Synonym: Tbd_1212

Alternate gene names: NA

Gene position: 1268997-1268074 (Counterclockwise)

Preceding gene: 74317236

Following gene: 74317229

Centisome position: 43.61

GC content: 62.23

Gene sequence:

>924_bases
ATGTTGCCCGCTCGCCAGTTCCGCTCTTTGCTTCCGTCCCTCTCGCCGCATCTTGGCGTCGTGGCCGTTATGGCACCGCT
GGCACAGCGCAGCGAGGTTCAACAGGCTCGCCGCTTCTGGCCGGTGGTCGAATACATGCGCCGTCGTCAAAACTACTTTC
CCGCCCGTTACCGGGTGCGGCTTCCCATTCTCGGCTCCGCACCACTCGCAGCGGTTCTTTGCGCGGTAGAAGCGCACAAA
CCGGCTGCGCAGTTTCCAGTCTGCCGGGTAGCGTTTGCGGTTCTCTGGTCTTATCGGCATTGCAGTTCTAACCCTACGGT
CAAGTTCGCTCCACTTCGTTCCGCTGGGACGCGCCGAAGCGCGCCGGTTATCTCAACCGTTGGGCGCCGTGCAGTCAGTG
CAGCCGCTCCTGCAAATCCACTCGGGCTGCGGGTCGTTCTCGTATCGCTCCACACGCTCCACCTGATCGCCGCGCTTGAT
GTAGCCCGCCACATGCTTCGCCGTGTCCTTCTCGCTGCCGGGGTCATCCCAGCACATCGCGCTCACCTTTCCGCACTTCC
TGCGGGCTATGTACAGCCCTCCAAGGTAGCGCCCGCGCTGGTCTTCGGCTGCCTGCACCATTTTTCGCTCCAAATTATTC
CAAAAAATATTCCGCGCCCAACAATCCGGTCGAGCCGAGGCCCGCCAGCGCCTTCAATCCTTGCCGGGTTCCGTAAGGCC
CGGCTCACCGCAAACGTTGGGCACCTTCTCTGCCAACCGCTTCTGTTCTTCCGGGCTGTCAATCGTCATCGTGTAGCCGC
AACACTTCGGCCACCCATAGCGCATCGCCCCCGCGCTATCGGTGCGCTGCGTGCTCCCGCATTTGCGGCACCACACCTGC
CCGCGTGCCAGTTGCGGTATCTGCTTCGCTATCGTGTCGTGTAG

Upstream 100 bases:

>100_bases
ACATATATTCACGGTCTAACATGGCGCTCAACCTCGCTCCCTTCGGTCGCTGGACGGCGCTAAAGCGCCGCCGGTTAGCT
CTACGTTAGAACTGCAAGGC

Downstream 100 bases:

>100_bases
CATCGTTCTCTCCTTGGCCAGTGCCCAACAAGTCATTCCAGGTGACGGGCGAAAAGCCGCCCGCCCCTGAATTCAAACGT
TAGGCACTCAAGTCCAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MLPARQFRSLLPSLSPHLGVVAVMAPLAQRSEVQQARRFWPVVEYMRRRQNYFPARYRVRLPILGSAPLAAVLCAVEAHK
PAAQFPVCRVAFAVLWSYRHCSSNPTVKFAPLRSAGTRRSAPVISTVGRRAVSAAAPANPLGLRVVLVSLHTLHLIAALD
VARHMLRRVLLAAGVIPAHRAHLSALPAGYVQPSKVAPALVFGCLHHFSLQIIPKNIPRPTIRSSRGPPAPSILAGFRKA
RLTANVGHLLCQPLLFFRAVNRHRVAATLRPPIAHRPRAIGALRAPAFAAPHLPACQLRYLLRYRVV

Sequences:

>Translated_307_residues
MLPARQFRSLLPSLSPHLGVVAVMAPLAQRSEVQQARRFWPVVEYMRRRQNYFPARYRVRLPILGSAPLAAVLCAVEAHK
PAAQFPVCRVAFAVLWSYRHCSSNPTVKFAPLRSAGTRRSAPVISTVGRRAVSAAAPANPLGLRVVLVSLHTLHLIAALD
VARHMLRRVLLAAGVIPAHRAHLSALPAGYVQPSKVAPALVFGCLHHFSLQIIPKNIPRPTIRSSRGPPAPSILAGFRKA
RLTANVGHLLCQPLLFFRAVNRHRVAATLRPPIAHRPRAIGALRAPAFAAPHLPACQLRYLLRYRVV
>Mature_307_residues
MLPARQFRSLLPSLSPHLGVVAVMAPLAQRSEVQQARRFWPVVEYMRRRQNYFPARYRVRLPILGSAPLAAVLCAVEAHK
PAAQFPVCRVAFAVLWSYRHCSSNPTVKFAPLRSAGTRRSAPVISTVGRRAVSAAAPANPLGLRVVLVSLHTLHLIAALD
VARHMLRRVLLAAGVIPAHRAHLSALPAGYVQPSKVAPALVFGCLHHFSLQIIPKNIPRPTIRSSRGPPAPSILAGFRKA
RLTANVGHLLCQPLLFFRAVNRHRVAATLRPPIAHRPRAIGALRAPAFAAPHLPACQLRYLLRYRVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33677; Mature: 33677

Theoretical pI: Translated: 12.55; Mature: 12.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPARQFRSLLPSLSPHLGVVAVMAPLAQRSEVQQARRFWPVVEYMRRRQNYFPARYRVR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LPILGSAPLAAVLCAVEAHKPAAQFPVCRVAFAVLWSYRHCSSNPTVKFAPLRSAGTRRS
EEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
APVISTVGRRAVSAAAPANPLGLRVVLVSLHTLHLIAALDVARHMLRRVLLAAGVIPAHR
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AHLSALPAGYVQPSKVAPALVFGCLHHFSLQIIPKNIPRPTIRSSRGPPAPSILAGFRKA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
RLTANVGHLLCQPLLFFRAVNRHRVAATLRPPIAHRPRAIGALRAPAFAAPHLPACQLRY
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHH
LLRYRVV
HHHHHCC
>Mature Secondary Structure
MLPARQFRSLLPSLSPHLGVVAVMAPLAQRSEVQQARRFWPVVEYMRRRQNYFPARYRVR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LPILGSAPLAAVLCAVEAHKPAAQFPVCRVAFAVLWSYRHCSSNPTVKFAPLRSAGTRRS
EEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
APVISTVGRRAVSAAAPANPLGLRVVLVSLHTLHLIAALDVARHMLRRVLLAAGVIPAHR
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AHLSALPAGYVQPSKVAPALVFGCLHHFSLQIIPKNIPRPTIRSSRGPPAPSILAGFRKA
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
RLTANVGHLLCQPLLFFRAVNRHRVAATLRPPIAHRPRAIGALRAPAFAAPHLPACQLRY
HHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHH
LLRYRVV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA