| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is ppk [H]
Identifier: 74317103
GI number: 74317103
Start: 1145225
End: 1147291
Strand: Reverse
Name: ppk [H]
Synonym: Tbd_1085
Alternate gene names: 74317103
Gene position: 1147291-1145225 (Counterclockwise)
Preceding gene: 74317121
Following gene: 74317102
Centisome position: 39.43
GC content: 67.44
Gene sequence:
>2067_bases ATGAACCTGCCCAGCCCCGACACACTCATCAATCGCGAACTCGGCATTCTCGGCTTCCAGCGCCGGGTCCTCGCCCAGGC CGAGGACCCGGCCGTACCGCTGCTCGAGCGGCTGCGCTTTCTGTGCATCGTGTCGAGCAACCTCGACGAGTTCTTCGAGG TGCGCGTCGCCGGCCTCAAGGAACAGATCCGCGCCGATTCGACCCGCACCTCGCCCGACGGCCTGACGCCGCGCCAGCAG TTCCGCGCCGTGGCGGACGCCGCGCACCTGCTCGTCGCGCGCCAATACGCGCTCTTCAACGAGGACCTCATTCCGGAACT CGCCGCGCACGGCATCCATTTCATCCGCCGCACGCAGTGGGACGAGGCCCAGGCGGCGTGGATACGCGACTATTTCTTCA ACGAACTGATGCCGGTGCTGACGCCGGTCGGCCTCGACCCTTCGCACCCGTTTCCGCGCGTGCTCAACAAGAGCCTCAAT TTCGCCGTCGAACTGTCGGGGCGCGATGCCTTCGGCCGCAATTCGGGCGCTGCCGTCGTGCAGGCGCCACGCTCGCTGCC GCGCGTGATCCGTCTGCCGCCCGAGATCGCCGGCGCCGAGTACGGCTTCGTCTTCCTGTCTTCGATCCTGCACGCGCACG TCGGCGAACTCTTCGCCGGGATGACGGTGCAGGGCTGCTACCAGTTCCGCGTCACGCGCAACTCGGACCTCTTCGTCGAC GAGGAGGAAAACAAGAACCTGCGTCAGTCGCTGCAGGGCGAGTTGCCGCAGCGCCACTTCGGCGCCGCCGTGCGCCTCGA GGTCGCCGACAACTGCTCGCCGGAGATGGCGGCCTTCCTGCTCGCCCAGTTCGAGCTCGACGCCGACGACCTCTACCAGG AACGCGGCCCGGTCAACCTCGTGCGGCTCATGCAGGTGCCGGACTGGGTCGAGCGGCCCGACCTCAAGTTCACGCCCTTC GTCCCCGCGCTGCCGGCGCGGCTCGCCAAGCAGGACGACATCTTTGCGCACATCCGCAAGAACGACATCCTGCTGCATCA CCCCTTCGAATCCTTCCAGCCGGTCATCGACTTCATCGAACAGGCCGCCGCCGATCCCGCCGTCGTCGCGATCCGCCAGA CCGTCTACCGTACCGGCACCGATTCGCAGCTCATGCAGGCGCTGATCCGCGCCGCCCAGTCCGGCAAGGAAGTCACGGTC GTCGTCGAACTGATGGCGCGCTTCGACGAAGAGGCCAACATCAACTGGGCGGCCAGGCTCGAGGAAACCGGCGCCCACGT GATCTACGGCGTCGTCGGCCACAAGACCCACGCCAAGCTCGCGCTCGTCGTGCGCCGCGAGGAAGGCAAGCTCAGGCGCT ACGTCCACCTCGGCACCGGCAACTACCACGCGCGCACCGCGCGGCTCTACACCGACTTCGGCCTGCTCACCGCCGACGAG GCGATCAGCGCCGACGTCGCGAGTCTCTTCACCCAGATCACCGGGCTCGGCAAGGCCGGCAAGCTCAAACGCCTGTGGCA GTCGCCGTTCACGTTGCACAGCGAGGTCATCGCCGCGATCAACCGCGAGGCCGGATTCGCCGCCGCCGGCAAGCCCGCCG CGATCGTCGCCAAGATGAACGCGCTGGTCGAGCCGCAGGTCATCGCCGCGCTCTACGCCGCGAGCCAGGCCGGCGTCCGG ATCGATCTCGTCATCCGCGGCGTCTGCGCGCTGCGCCCGGGCATCCCGGGCCTCTCGGAGACAATCCGCGTTCGCTCGGT GGTCGGGCGCTTTCTCGAGCACTCGCGGATCTTCTACTTCCGCAACGGCGGCGACGAGCAGGTCTACCTGTCGTCGGCCG ACTGGATGGACCGCAACTTCTTCCGCCGCATCGAGACGAGCTTTCCCATCCTTAACCCCAAGCTGAAAAAGCGCGTCATC AACGAAGGCCTCACGCCCTATCTGCGCGACAACGTCCAGGCCTGGGATATGCAGCCCGACGGCAGCTACCGCCGCCGCAC CAAGCGCGGCGCGAAAGCCTATTGCGCGCAGTGCGCACTGCTGGCGCTGCTGACGACCCCCAGCTGA
Upstream 100 bases:
>100_bases CAGCTTGAGCTCGATTTCGAGCGGATGCGCGGCGGCCATAAACTCCGTGTCACGAGAAACGTCGAGGCTTATCATTGAAG CACACCCTGACCACCGGCTC
Downstream 100 bases:
>100_bases CAAACCGCCCTCGCACGGGATCGGCGCCGCCCGTCACGCCGCCCGTGACTCCCCCTGCGCGCTCATCGGCGGGCAACGCC GGACCGCCGCGGGCAGCGGT
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MNLPSPDTLINRELGILGFQRRVLAQAEDPAVPLLERLRFLCIVSSNLDEFFEVRVAGLKEQIRADSTRTSPDGLTPRQQ FRAVADAAHLLVARQYALFNEDLIPELAAHGIHFIRRTQWDEAQAAWIRDYFFNELMPVLTPVGLDPSHPFPRVLNKSLN FAVELSGRDAFGRNSGAAVVQAPRSLPRVIRLPPEIAGAEYGFVFLSSILHAHVGELFAGMTVQGCYQFRVTRNSDLFVD EEENKNLRQSLQGELPQRHFGAAVRLEVADNCSPEMAAFLLAQFELDADDLYQERGPVNLVRLMQVPDWVERPDLKFTPF VPALPARLAKQDDIFAHIRKNDILLHHPFESFQPVIDFIEQAAADPAVVAIRQTVYRTGTDSQLMQALIRAAQSGKEVTV VVELMARFDEEANINWAARLEETGAHVIYGVVGHKTHAKLALVVRREEGKLRRYVHLGTGNYHARTARLYTDFGLLTADE AISADVASLFTQITGLGKAGKLKRLWQSPFTLHSEVIAAINREAGFAAAGKPAAIVAKMNALVEPQVIAALYAASQAGVR IDLVIRGVCALRPGIPGLSETIRVRSVVGRFLEHSRIFYFRNGGDEQVYLSSADWMDRNFFRRIETSFPILNPKLKKRVI NEGLTPYLRDNVQAWDMQPDGSYRRRTKRGAKAYCAQCALLALLTTPS
Sequences:
>Translated_688_residues MNLPSPDTLINRELGILGFQRRVLAQAEDPAVPLLERLRFLCIVSSNLDEFFEVRVAGLKEQIRADSTRTSPDGLTPRQQ FRAVADAAHLLVARQYALFNEDLIPELAAHGIHFIRRTQWDEAQAAWIRDYFFNELMPVLTPVGLDPSHPFPRVLNKSLN FAVELSGRDAFGRNSGAAVVQAPRSLPRVIRLPPEIAGAEYGFVFLSSILHAHVGELFAGMTVQGCYQFRVTRNSDLFVD EEENKNLRQSLQGELPQRHFGAAVRLEVADNCSPEMAAFLLAQFELDADDLYQERGPVNLVRLMQVPDWVERPDLKFTPF VPALPARLAKQDDIFAHIRKNDILLHHPFESFQPVIDFIEQAAADPAVVAIRQTVYRTGTDSQLMQALIRAAQSGKEVTV VVELMARFDEEANINWAARLEETGAHVIYGVVGHKTHAKLALVVRREEGKLRRYVHLGTGNYHARTARLYTDFGLLTADE AISADVASLFTQITGLGKAGKLKRLWQSPFTLHSEVIAAINREAGFAAAGKPAAIVAKMNALVEPQVIAALYAASQAGVR IDLVIRGVCALRPGIPGLSETIRVRSVVGRFLEHSRIFYFRNGGDEQVYLSSADWMDRNFFRRIETSFPILNPKLKKRVI NEGLTPYLRDNVQAWDMQPDGSYRRRTKRGAKAYCAQCALLALLTTPS >Mature_688_residues MNLPSPDTLINRELGILGFQRRVLAQAEDPAVPLLERLRFLCIVSSNLDEFFEVRVAGLKEQIRADSTRTSPDGLTPRQQ FRAVADAAHLLVARQYALFNEDLIPELAAHGIHFIRRTQWDEAQAAWIRDYFFNELMPVLTPVGLDPSHPFPRVLNKSLN FAVELSGRDAFGRNSGAAVVQAPRSLPRVIRLPPEIAGAEYGFVFLSSILHAHVGELFAGMTVQGCYQFRVTRNSDLFVD EEENKNLRQSLQGELPQRHFGAAVRLEVADNCSPEMAAFLLAQFELDADDLYQERGPVNLVRLMQVPDWVERPDLKFTPF VPALPARLAKQDDIFAHIRKNDILLHHPFESFQPVIDFIEQAAADPAVVAIRQTVYRTGTDSQLMQALIRAAQSGKEVTV VVELMARFDEEANINWAARLEETGAHVIYGVVGHKTHAKLALVVRREEGKLRRYVHLGTGNYHARTARLYTDFGLLTADE AISADVASLFTQITGLGKAGKLKRLWQSPFTLHSEVIAAINREAGFAAAGKPAAIVAKMNALVEPQVIAALYAASQAGVR IDLVIRGVCALRPGIPGLSETIRVRSVVGRFLEHSRIFYFRNGGDEQVYLSSADWMDRNFFRRIETSFPILNPKLKKRVI NEGLTPYLRDNVQAWDMQPDGSYRRRTKRGAKAYCAQCALLALLTTPS
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=695, Percent_Identity=35.5395683453237, Blast_Score=396, Evalue=1e-111,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 76888; Mature: 76888
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLPSPDTLINRELGILGFQRRVLAQAEDPAVPLLERLRFLCIVSSNLDEFFEVRVAGLK CCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EQIRADSTRTSPDGLTPRQQFRAVADAAHLLVARQYALFNEDLIPELAAHGIHFIRRTQW HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC DEAQAAWIRDYFFNELMPVLTPVGLDPSHPFPRVLNKSLNFAVELSGRDAFGRNSGAAVV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCEEE QAPRSLPRVIRLPPEIAGAEYGFVFLSSILHAHVGELFAGMTVQGCYQFRVTRNSDLFVD ECCHHCCHHEECCCHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECEEEEEEECCCCEEEE EEENKNLRQSLQGELPQRHFGAAVRLEVADNCSPEMAAFLLAQFELDADDLYQERGPVNL CCCCHHHHHHHHCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHH VRLMQVPDWVERPDLKFTPFVPALPARLAKQDDIFAHIRKNDILLHHPFESFQPVIDFIE HHHHHCCCHHCCCCCCCCCCCCHHHHHHCCCCCHHEEEECCCEEEECCHHHHHHHHHHHH QAAADPAVVAIRQTVYRTGTDSQLMQALIRAAQSGKEVTVVVELMARFDEEANINWAARL HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCEEEEE EETGAHVIYGVVGHKTHAKLALVVRREEGKLRRYVHLGTGNYHARTARLYTDFGLLTADE CCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCH AISADVASLFTQITGLGKAGKLKRLWQSPFTLHSEVIAAINREAGFAAAGKPAAIVAKMN HHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ALVEPQVIAALYAASQAGVRIDLVIRGVCALRPGIPGLSETIRVRSVVGRFLEHSRIFYF HHCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEE RNGGDEQVYLSSADWMDRNFFRRIETSFPILNPKLKKRVINEGLTPYLRDNVQAWDMQPD ECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCCCEEECCCCC GSYRRRTKRGAKAYCAQCALLALLTTPS CHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNLPSPDTLINRELGILGFQRRVLAQAEDPAVPLLERLRFLCIVSSNLDEFFEVRVAGLK CCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH EQIRADSTRTSPDGLTPRQQFRAVADAAHLLVARQYALFNEDLIPELAAHGIHFIRRTQW HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC DEAQAAWIRDYFFNELMPVLTPVGLDPSHPFPRVLNKSLNFAVELSGRDAFGRNSGAAVV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCCEEE QAPRSLPRVIRLPPEIAGAEYGFVFLSSILHAHVGELFAGMTVQGCYQFRVTRNSDLFVD ECCHHCCHHEECCCHHCCCCHHHHHHHHHHHHHHHHHHHCCEEECEEEEEEECCCCEEEE EEENKNLRQSLQGELPQRHFGAAVRLEVADNCSPEMAAFLLAQFELDADDLYQERGPVNL CCCCHHHHHHHHCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHH VRLMQVPDWVERPDLKFTPFVPALPARLAKQDDIFAHIRKNDILLHHPFESFQPVIDFIE HHHHHCCCHHCCCCCCCCCCCCHHHHHHCCCCCHHEEEECCCEEEECCHHHHHHHHHHHH QAAADPAVVAIRQTVYRTGTDSQLMQALIRAAQSGKEVTVVVELMARFDEEANINWAARL HHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCEEEEE EETGAHVIYGVVGHKTHAKLALVVRREEGKLRRYVHLGTGNYHARTARLYTDFGLLTADE CCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCH AISADVASLFTQITGLGKAGKLKRLWQSPFTLHSEVIAAINREAGFAAAGKPAAIVAKMN HHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ALVEPQVIAALYAASQAGVRIDLVIRGVCALRPGIPGLSETIRVRSVVGRFLEHSRIFYF HHCCHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEE RNGGDEQVYLSSADWMDRNFFRRIETSFPILNPKLKKRVINEGLTPYLRDNVQAWDMQPD ECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHCCCEEECCCCC GSYRRRTKRGAKAYCAQCALLALLTTPS CHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA