Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is ybhG [C]

Identifier: 74317102

GI number: 74317102

Start: 1144110

End: 1145180

Strand: Reverse

Name: ybhG [C]

Synonym: Tbd_1084

Alternate gene names: 74317102

Gene position: 1145180-1144110 (Counterclockwise)

Preceding gene: 74317103

Following gene: 74317101

Centisome position: 39.36

GC content: 71.34

Gene sequence:

>1071_bases
GTGACTCCCCCTGCGCGCTCATCGGCGGGCAACGCCGGACCGCCGCGGGCAGCGGTGAAACGAATTACACTCGGCTTATT
TATTGCGTCCTTTCGGGCTGCCCCGATGAACCTGCATCTCGCTCCCCTTCGGCTCCTGTTCGTGGCATTGCTGGCCGGTT
GCCAGGCGGCCGACGAGGACCGGTTTCAAGGCTATGTCGAAGGCGAGCCGGTCCTGGTCGCAGCGCAGCAAAGCGGCCAG
TTGACCTCACTGCAGGTGCGACGCGGCGACATGATTGCGACGGGCGCGCCGCTTTTCAGCCAGGATGCGGCGACCGAAGC
CGCCAGCCTCGGCGAGGCCCGCGCGCAGCTGGCACAGGCGCAGGCTCAGTTCGGCAATCTCGCGACCGGCAAGCGACCGC
CCGAGATCGCGGCGATCGCCGCCCGCGAGCGCGAGGCCGAGGCGCGGCGGGAGCTGTCCGCCGCCCACCTCGCGCGTCAG
GAGGCCCTGGTCGCGAAGGGCTTCATCAGCGCCCAAGCCCTCGACGAGGCGCGCGCGCAACTCGCGCGCGACGAGGCCAG
CGTCGCGCAAACGCGGGCCGAACTCGCGACCGCGCGCCTGCCGGGCCGCCGCGACGAGCGCGCCGGTGCCCGCGCGGCGG
TGTCGGCGAGCCAGGCCGCGCTCGAGCAAAGCGCAATCAGGCTCGAGCAGAAATCGCAGCGCGCCCCCGTGGGCGGTTCG
GTGCAGGACGTGTTTTTCCGGGTGGGCGAATGGGCGACGCCGGGGCAGGCGGTGGTCTCGATCCTGCCGCCGCAAAACAT
CAAGGTCCGATTCTTCATTCCGGAACCCCGCCTCGGCGCGCTGCGGACCGGGCAAGGCGTCGCGATCCACTGCGACGGCT
GCGGCGCCGGGATCCCCGCCACGATCCGCTTCGTCAGCGCCTCCGCCGAATACACGCCGCCCGTGCTGTACAGCGAAAAG
AACCGCCATCGGCTCGTCTACCTCGTCGAAGCCTGGCCGGCCGCCGGGGACGCCGCGCGGCTGCACCCGGGGCAGCCCGT
GAGCGTCGCCCTCGACAGCGGCAAACGATGA

Upstream 100 bases:

>100_bases
CGAAAGCCTATTGCGCGCAGTGCGCACTGCTGGCGCTGCTGACGACCCCCAGCTGACAAACCGCCCTCGCACGGGATCGG
CGCCGCCCGTCACGCCGCCC

Downstream 100 bases:

>100_bases
GTGGCGATTACGCCATCGACGTGCAGGGCCTGAGCAAATCCTTCGGCCGCAAACGCGTCGTCAACGATCTGAGCCTGCGC
GTCGAAGCGGGCGAGATCTA

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MTPPARSSAGNAGPPRAAVKRITLGLFIASFRAAPMNLHLAPLRLLFVALLAGCQAADEDRFQGYVEGEPVLVAAQQSGQ
LTSLQVRRGDMIATGAPLFSQDAATEAASLGEARAQLAQAQAQFGNLATGKRPPEIAAIAAREREAEARRELSAAHLARQ
EALVAKGFISAQALDEARAQLARDEASVAQTRAELATARLPGRRDERAGARAAVSASQAALEQSAIRLEQKSQRAPVGGS
VQDVFFRVGEWATPGQAVVSILPPQNIKVRFFIPEPRLGALRTGQGVAIHCDGCGAGIPATIRFVSASAEYTPPVLYSEK
NRHRLVYLVEAWPAAGDAARLHPGQPVSVALDSGKR

Sequences:

>Translated_356_residues
MTPPARSSAGNAGPPRAAVKRITLGLFIASFRAAPMNLHLAPLRLLFVALLAGCQAADEDRFQGYVEGEPVLVAAQQSGQ
LTSLQVRRGDMIATGAPLFSQDAATEAASLGEARAQLAQAQAQFGNLATGKRPPEIAAIAAREREAEARRELSAAHLARQ
EALVAKGFISAQALDEARAQLARDEASVAQTRAELATARLPGRRDERAGARAAVSASQAALEQSAIRLEQKSQRAPVGGS
VQDVFFRVGEWATPGQAVVSILPPQNIKVRFFIPEPRLGALRTGQGVAIHCDGCGAGIPATIRFVSASAEYTPPVLYSEK
NRHRLVYLVEAWPAAGDAARLHPGQPVSVALDSGKR
>Mature_355_residues
TPPARSSAGNAGPPRAAVKRITLGLFIASFRAAPMNLHLAPLRLLFVALLAGCQAADEDRFQGYVEGEPVLVAAQQSGQL
TSLQVRRGDMIATGAPLFSQDAATEAASLGEARAQLAQAQAQFGNLATGKRPPEIAAIAAREREAEARRELSAAHLARQE
ALVAKGFISAQALDEARAQLARDEASVAQTRAELATARLPGRRDERAGARAAVSASQAALEQSAIRLEQKSQRAPVGGSV
QDVFFRVGEWATPGQAVVSILPPQNIKVRFFIPEPRLGALRTGQGVAIHCDGCGAGIPATIRFVSASAEYTPPVLYSEKN
RHRLVYLVEAWPAAGDAARLHPGQPVSVALDSGKR

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=287, Percent_Identity=28.9198606271777, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1789900, Length=277, Percent_Identity=26.3537906137184, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 37563; Mature: 37432

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPARSSAGNAGPPRAAVKRITLGLFIASFRAAPMNLHLAPLRLLFVALLAGCQAADED
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHH
RFQGYVEGEPVLVAAQQSGQLTSLQVRRGDMIATGAPLFSQDAATEAASLGEARAQLAQA
HCCCEECCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QAQFGNLATGKRPPEIAAIAAREREAEARRELSAAHLARQEALVAKGFISAQALDEARAQ
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARDEASVAQTRAELATARLPGRRDERAGARAAVSASQAALEQSAIRLEQKSQRAPVGGS
HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VQDVFFRVGEWATPGQAVVSILPPQNIKVRFFIPEPRLGALRTGQGVAIHCDGCGAGIPA
HHHHHHHHCCCCCCCHHEEEEECCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCE
TIRFVSASAEYTPPVLYSEKNRHRLVYLVEAWPAAGDAARLHPGQPVSVALDSGKR
EEEEEECCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
TPPARSSAGNAGPPRAAVKRITLGLFIASFRAAPMNLHLAPLRLLFVALLAGCQAADED
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCHH
RFQGYVEGEPVLVAAQQSGQLTSLQVRRGDMIATGAPLFSQDAATEAASLGEARAQLAQA
HCCCEECCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QAQFGNLATGKRPPEIAAIAAREREAEARRELSAAHLARQEALVAKGFISAQALDEARAQ
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LARDEASVAQTRAELATARLPGRRDERAGARAAVSASQAALEQSAIRLEQKSQRAPVGGS
HHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VQDVFFRVGEWATPGQAVVSILPPQNIKVRFFIPEPRLGALRTGQGVAIHCDGCGAGIPA
HHHHHHHHCCCCCCCHHEEEEECCCCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCE
TIRFVSASAEYTPPVLYSEKNRHRLVYLVEAWPAAGDAARLHPGQPVSVALDSGKR
EEEEEECCCCCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA