| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74317121
Identifier: 74317121
GI number: 74317121
Start: 1161874
End: 1162812
Strand: Reverse
Name: 74317121
Synonym: Tbd_1103
Alternate gene names: NA
Gene position: 1162812-1161874 (Counterclockwise)
Preceding gene: 74317122
Following gene: 74317103
Centisome position: 39.96
GC content: 63.37
Gene sequence:
>939_bases ATGCGCCTACTTCCGCTGCTCGCCACCCTCGCTTTCTGCACCAGTGCAGCCGCTGGACCCAAGGACGTCGTCCGCACGCA CCCCGCGCAGAAAGTCGGCGCCGAGACCTACGTCATCCACGGCCCGCAAGGCGTTCCCTCGGTCGAAAACCAGAGCTTCA TGAACAACCCGGCGTGGATCGTCACCCCCGACGGCGTCGTCGTCATCGATCCCGGTTCCAGCGTGCAGGCCGGCCGCATG GTCGTCGCGCAGGTTCGCAAGACGACCAAGAAGCCGGTCACCCACGTCTTCAACACCCACGTCCACGGTGACCATTGGCT CGGCAATCAGGCGATCCTCGAGGTCTGGCCCAAGGCGACGATCATCGGCCACCCGGACATGATCAAAGGCGCGCGCGACG GCGCCGGCGCATTCTGGATCAAGCTGATGTCGGACATGACCAAGGGCTATACCGACGGGACGCGCGCCGAGATTCCGACC GTCGAGGCCCGCGACGGACAGGAATTCAAGATCGGCGGAAAGACCTTCCGCATCCATTCGTCGACCCACGCGCACAGCAA GACCGACCTCATGATCGAGGTCGTCGAGGACCGCACGCTCTTCACCGGCGACAACGTCCTCAGCCGTCAGGTCATGAACC TGCGCGACGGCACGTTCAAGGGCGTGATGAAGGAAACCGAGCGTGCGCTCGCGGTCGACGCGAAGCTCTACGTCCCCGGC CACGGCAAGACCGGCGACCGCAAACTGGTCGAGGAACAGAAAGCCTATTTCGACGCGCTGATGGCCGAAGTGCGGCGACT TTACGACGAAGGCAAGAGCGACTTCGAAATGAAGCCGCTCATCGCCGAAAAGCTCAAGGCCTACAAGAACTGGGCCGAGT GGGACGCCAACCTCGGGCCCCAGATCAGCCTGGCGATACTCGAGATCGAGCAGGAATAG
Upstream 100 bases:
>100_bases ATGAACCGGATCATCTTCGAAAAATGGTGGTAGGCGTTTTCGACCATTAAACTCTCAGGGTTGTCTGTGTATGGTTCCGC AACCACAAGGAGACTCTGAT
Downstream 100 bases:
>100_bases GCAGTCACGCGGCACTTGCCGCGTGCTTCAATCGTGCAGGCGGGTCACGCTCGCGACCGCCTGCGGCCGCCATTCACCGT CGAGATTGACCCACACCACG
Product: putative hydrolase
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta Lactamase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Beta-Lactamase; Hydrolase; Cyclase; Metallo-Beta-Lactamase Superfamily Protein; Beta Lactamase SoxH-Like Protein; Metallo-Beta-Lactamase Domain Protein; Glyoxylase-Like Zinc-Dependent Hydrolase; Cyclase/Dehydrase
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWIVTPDGVVVIDPGSSVQAGRM VVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKATIIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPT VEARDGQEFKIGGKTFRIHSSTHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGPQISLAILEIEQE
Sequences:
>Translated_312_residues MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWIVTPDGVVVIDPGSSVQAGRM VVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKATIIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPT VEARDGQEFKIGGKTFRIHSSTHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGPQISLAILEIEQE >Mature_312_residues MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWIVTPDGVVVIDPGSSVQAGRM VVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKATIIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPT VEARDGQEFKIGGKTFRIHSSTHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGPQISLAILEIEQE
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34484; Mature: 34484
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWI CCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCHHCCCCCEE VTPDGVVVIDPGSSVQAGRMVVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKAT ECCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHCCCCEE IIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPTVEARDGQEFKIGGKTFRIHS EECCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEC STHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG CCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEECC HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC QISLAILEIEQE CEEEEEEEEECC >Mature Secondary Structure MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWI CCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCHHCCCCCEE VTPDGVVVIDPGSSVQAGRMVVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKAT ECCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHCCCCEE IIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPTVEARDGQEFKIGGKTFRIHS EECCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEC STHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG CCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEECC HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC QISLAILEIEQE CEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA