Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74317121

Identifier: 74317121

GI number: 74317121

Start: 1161874

End: 1162812

Strand: Reverse

Name: 74317121

Synonym: Tbd_1103

Alternate gene names: NA

Gene position: 1162812-1161874 (Counterclockwise)

Preceding gene: 74317122

Following gene: 74317103

Centisome position: 39.96

GC content: 63.37

Gene sequence:

>939_bases
ATGCGCCTACTTCCGCTGCTCGCCACCCTCGCTTTCTGCACCAGTGCAGCCGCTGGACCCAAGGACGTCGTCCGCACGCA
CCCCGCGCAGAAAGTCGGCGCCGAGACCTACGTCATCCACGGCCCGCAAGGCGTTCCCTCGGTCGAAAACCAGAGCTTCA
TGAACAACCCGGCGTGGATCGTCACCCCCGACGGCGTCGTCGTCATCGATCCCGGTTCCAGCGTGCAGGCCGGCCGCATG
GTCGTCGCGCAGGTTCGCAAGACGACCAAGAAGCCGGTCACCCACGTCTTCAACACCCACGTCCACGGTGACCATTGGCT
CGGCAATCAGGCGATCCTCGAGGTCTGGCCCAAGGCGACGATCATCGGCCACCCGGACATGATCAAAGGCGCGCGCGACG
GCGCCGGCGCATTCTGGATCAAGCTGATGTCGGACATGACCAAGGGCTATACCGACGGGACGCGCGCCGAGATTCCGACC
GTCGAGGCCCGCGACGGACAGGAATTCAAGATCGGCGGAAAGACCTTCCGCATCCATTCGTCGACCCACGCGCACAGCAA
GACCGACCTCATGATCGAGGTCGTCGAGGACCGCACGCTCTTCACCGGCGACAACGTCCTCAGCCGTCAGGTCATGAACC
TGCGCGACGGCACGTTCAAGGGCGTGATGAAGGAAACCGAGCGTGCGCTCGCGGTCGACGCGAAGCTCTACGTCCCCGGC
CACGGCAAGACCGGCGACCGCAAACTGGTCGAGGAACAGAAAGCCTATTTCGACGCGCTGATGGCCGAAGTGCGGCGACT
TTACGACGAAGGCAAGAGCGACTTCGAAATGAAGCCGCTCATCGCCGAAAAGCTCAAGGCCTACAAGAACTGGGCCGAGT
GGGACGCCAACCTCGGGCCCCAGATCAGCCTGGCGATACTCGAGATCGAGCAGGAATAG

Upstream 100 bases:

>100_bases
ATGAACCGGATCATCTTCGAAAAATGGTGGTAGGCGTTTTCGACCATTAAACTCTCAGGGTTGTCTGTGTATGGTTCCGC
AACCACAAGGAGACTCTGAT

Downstream 100 bases:

>100_bases
GCAGTCACGCGGCACTTGCCGCGTGCTTCAATCGTGCAGGCGGGTCACGCTCGCGACCGCCTGCGGCCGCCATTCACCGT
CGAGATTGACCCACACCACG

Product: putative hydrolase

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta Lactamase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Beta-Lactamase; Hydrolase; Cyclase; Metallo-Beta-Lactamase Superfamily Protein; Beta Lactamase SoxH-Like Protein; Metallo-Beta-Lactamase Domain Protein; Glyoxylase-Like Zinc-Dependent Hydrolase; Cyclase/Dehydrase

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWIVTPDGVVVIDPGSSVQAGRM
VVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKATIIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPT
VEARDGQEFKIGGKTFRIHSSTHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG
HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGPQISLAILEIEQE

Sequences:

>Translated_312_residues
MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWIVTPDGVVVIDPGSSVQAGRM
VVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKATIIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPT
VEARDGQEFKIGGKTFRIHSSTHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG
HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGPQISLAILEIEQE
>Mature_312_residues
MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWIVTPDGVVVIDPGSSVQAGRM
VVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKATIIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPT
VEARDGQEFKIGGKTFRIHSSTHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG
HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGPQISLAILEIEQE

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34484; Mature: 34484

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWI
CCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCHHCCCCCEE
VTPDGVVVIDPGSSVQAGRMVVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKAT
ECCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHCCCCEE
IIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPTVEARDGQEFKIGGKTFRIHS
EECCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEC
STHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG
CCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEECC
HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
QISLAILEIEQE
CEEEEEEEEECC
>Mature Secondary Structure
MRLLPLLATLAFCTSAAAGPKDVVRTHPAQKVGAETYVIHGPQGVPSVENQSFMNNPAWI
CCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCHHCCCCCEE
VTPDGVVVIDPGSSVQAGRMVVAQVRKTTKKPVTHVFNTHVHGDHWLGNQAILEVWPKAT
ECCCCEEEECCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCHHHHHCCCCEE
IIGHPDMIKGARDGAGAFWIKLMSDMTKGYTDGTRAEIPTVEARDGQEFKIGGKTFRIHS
EECCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCEEEEEEC
STHAHSKTDLMIEVVEDRTLFTGDNVLSRQVMNLRDGTFKGVMKETERALAVDAKLYVPG
CCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHEEEEEEEEECC
HGKTGDRKLVEEQKAYFDALMAEVRRLYDEGKSDFEMKPLIAEKLKAYKNWAEWDANLGP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
QISLAILEIEQE
CEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA