The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74317095

Identifier: 74317095

GI number: 74317095

Start: 1136104

End: 1137450

Strand: Reverse

Name: 74317095

Synonym: Tbd_1077

Alternate gene names: NA

Gene position: 1137450-1136104 (Counterclockwise)

Preceding gene: 74317096

Following gene: 74317094

Centisome position: 39.09

GC content: 45.73

Gene sequence:

>1347_bases
TTGCTTTTGAATGAGGATCACTTTAACGATGTAAAAAGCAAACGGATTCTTCCCGCAAAACTCCAGGAAACGTTCGTCGC
TTTCGCGAACTCGGATGGCGGAGACTTGTATGTTGGAATCGAGGATAAAGCGCACACCGGTGAGCGTGTCGTAGGATTTG
GCGAACAGGAAGAAGCAAACGCTATCGTCTCGACTTTGCTGGAAGAGACTCAGCCCGCAGTTGAAAATGTCTCCATTGAG
TTCCTCGATACCGATGGTAAAGGCTTGGTGTTACATATTGGAATTCCCAAAAGTCCAAAAGTCCACTACACAGCTTCGGG
CGATTGCTTTATCCGAATTAATGCTCAAAAAAGGAAAATCAAAGGAGAAAGGATTACTCAGCTTGGGTACTCCAAAGGGG
CAGAGCCATACGAACGGAAACCTGTTGCCGATGTTGAACTTCAGGAGATCGCGCAAAGCGAAGAGCTCGCTGACTATATG
CGACGCGTTTCCACTCATCTCGAGCCAACAATTTTTTTAAGGAAGCAAAGACTCTTAACGTCACATGACGGCACACGCAT
TCCGAACGTTGGTTGTGTGCTCCTATTTGATGAAGAACCCCAGGCGACCCTGGAAACACGTTGTGCAGTTAAAGTCTACC
GACTTCGAACAACCGAGAAGGAATATAAGAGAGAGCAGTTGGAAGAAATGCCTGTAACCATCAACGGTGGCACGGAAGAA
GTAATTCGTAAAACAATTGATCAAGTCGTGAAATATATTGATGGGGCAGCGTTCCGGGATGGCGGCAAGCTTGTCAAGCT
TAGGTACCCAGCAGAAGCCCTAAAAGAAATATTAGTTAACGCTGTAATTCATCGCGACTACAGCCTAAACGACGATATCC
ACGTTCGAATATTTGACAACCGAATCGAGGTTCAAAGCCCCGGAAAGCTACCTGGATACATGAGCCTAGACAATCTTTAT
GAAGAACGCTTTTCGAGGAATCCCAACCTCGTTAGGATGCTTCACAATCTTCCCAATCCAGTAAACCACGACATCGGTGA
GGGTCTAGACACGGCCAAGAATGAATTAAAAAAAGCAGGATTAGTTGAGCCCATCTTTGAAGAAAAAGATAACGCTTTCC
TTGTAACCATCAAACATCAGCGAATCGCTTCTGTTGAAGAAGTCGTACTGAGTTATCTCGAGGAAAATCCAGGTACTGAA
ATCACTAATAAACTTGTTCGTCAGTTGAGTGGTGAAGACGACATGCAGAAGGTGAAATTGGCACTTCAAAAGCTCAGGGC
AGCCGGCCATATCGTGCCACTTGACGAGAATGCCAGCGCATTTAACTTTCGCTATGTGAAGGCATGA

Upstream 100 bases:

>100_bases
CTGCAATCCTTGATGCCTGGCCATTCGCACCCAATTTTTATAATTCAAAGGAGATCTTGTGGAAGTCACGAGAATTCAGG
AAGACGAACTTAATTCCCTT

Downstream 100 bases:

>100_bases
GTCTTGAGCGCGGGAATTTAAGCAAGCTAAAGAGGGCGAATACCGTTGATGCACTACTGCCCCCTTTCTCCACCTAAGAA
TGGAGGACTCATAGGGCACA

Product: transcriptional regulator

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase RecG; Truncated ATP-Dependent DNA Helicase; Xin-Antitoxin System Toxin Component Fic Family; Transcription Regulator; ATP-Dependent DNA Helicase Protein; AAA-4 Family Protein; Divergent AAA Domain Family; ATPase AAA Family; Transcriptional Regulator With HTH Domain

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MLLNEDHFNDVKSKRILPAKLQETFVAFANSDGGDLYVGIEDKAHTGERVVGFGEQEEANAIVSTLLEETQPAVENVSIE
FLDTDGKGLVLHIGIPKSPKVHYTASGDCFIRINAQKRKIKGERITQLGYSKGAEPYERKPVADVELQEIAQSEELADYM
RRVSTHLEPTIFLRKQRLLTSHDGTRIPNVGCVLLFDEEPQATLETRCAVKVYRLRTTEKEYKREQLEEMPVTINGGTEE
VIRKTIDQVVKYIDGAAFRDGGKLVKLRYPAEALKEILVNAVIHRDYSLNDDIHVRIFDNRIEVQSPGKLPGYMSLDNLY
EERFSRNPNLVRMLHNLPNPVNHDIGEGLDTAKNELKKAGLVEPIFEEKDNAFLVTIKHQRIASVEEVVLSYLEENPGTE
ITNKLVRQLSGEDDMQKVKLALQKLRAAGHIVPLDENASAFNFRYVKA

Sequences:

>Translated_448_residues
MLLNEDHFNDVKSKRILPAKLQETFVAFANSDGGDLYVGIEDKAHTGERVVGFGEQEEANAIVSTLLEETQPAVENVSIE
FLDTDGKGLVLHIGIPKSPKVHYTASGDCFIRINAQKRKIKGERITQLGYSKGAEPYERKPVADVELQEIAQSEELADYM
RRVSTHLEPTIFLRKQRLLTSHDGTRIPNVGCVLLFDEEPQATLETRCAVKVYRLRTTEKEYKREQLEEMPVTINGGTEE
VIRKTIDQVVKYIDGAAFRDGGKLVKLRYPAEALKEILVNAVIHRDYSLNDDIHVRIFDNRIEVQSPGKLPGYMSLDNLY
EERFSRNPNLVRMLHNLPNPVNHDIGEGLDTAKNELKKAGLVEPIFEEKDNAFLVTIKHQRIASVEEVVLSYLEENPGTE
ITNKLVRQLSGEDDMQKVKLALQKLRAAGHIVPLDENASAFNFRYVKA
>Mature_448_residues
MLLNEDHFNDVKSKRILPAKLQETFVAFANSDGGDLYVGIEDKAHTGERVVGFGEQEEANAIVSTLLEETQPAVENVSIE
FLDTDGKGLVLHIGIPKSPKVHYTASGDCFIRINAQKRKIKGERITQLGYSKGAEPYERKPVADVELQEIAQSEELADYM
RRVSTHLEPTIFLRKQRLLTSHDGTRIPNVGCVLLFDEEPQATLETRCAVKVYRLRTTEKEYKREQLEEMPVTINGGTEE
VIRKTIDQVVKYIDGAAFRDGGKLVKLRYPAEALKEILVNAVIHRDYSLNDDIHVRIFDNRIEVQSPGKLPGYMSLDNLY
EERFSRNPNLVRMLHNLPNPVNHDIGEGLDTAKNELKKAGLVEPIFEEKDNAFLVTIKHQRIASVEEVVLSYLEENPGTE
ITNKLVRQLSGEDDMQKVKLALQKLRAAGHIVPLDENASAFNFRYVKA

Specific function: Unknown

COG id: COG2865

COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50629; Mature: 50629

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNEDHFNDVKSKRILPAKLQETFVAFANSDGGDLYVGIEDKAHTGERVVGFGEQEEAN
CCCCCCCCCHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCCCEEECCCCCHHHH
AIVSTLLEETQPAVENVSIEFLDTDGKGLVLHIGIPKSPKVHYTASGDCFIRINAQKRKI
HHHHHHHHHHCCHHHCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEEECCHHHHC
KGERITQLGYSKGAEPYERKPVADVELQEIAQSEELADYMRRVSTHLEPTIFLRKQRLLT
CCHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SHDGTRIPNVGCVLLFDEEPQATLETRCAVKVYRLRTTEKEYKREQLEEMPVTINGGTEE
CCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHCCEEEECCHHH
VIRKTIDQVVKYIDGAAFRDGGKLVKLRYPAEALKEILVNAVIHRDYSLNDDIHVRIFDN
HHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
RIEVQSPGKLPGYMSLDNLYEERFSRNPNLVRMLHNLPNPVNHDIGEGLDTAKNELKKAG
EEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCC
LVEPIFEEKDNAFLVTIKHQRIASVEEVVLSYLEENPGTEITNKLVRQLSGEDDMQKVKL
CCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH
ALQKLRAAGHIVPLDENASAFNFRYVKA
HHHHHHHCCCEEECCCCCCEEEEEEEEC
>Mature Secondary Structure
MLLNEDHFNDVKSKRILPAKLQETFVAFANSDGGDLYVGIEDKAHTGERVVGFGEQEEAN
CCCCCCCCCHHHHCCCCHHHHHHHHHEEECCCCCEEEEEECCCCCCCCEEECCCCCHHHH
AIVSTLLEETQPAVENVSIEFLDTDGKGLVLHIGIPKSPKVHYTASGDCFIRINAQKRKI
HHHHHHHHHHCCHHHCCEEEEEECCCCEEEEEEECCCCCCEEEEECCCEEEEECCHHHHC
KGERITQLGYSKGAEPYERKPVADVELQEIAQSEELADYMRRVSTHLEPTIFLRKQRLLT
CCHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SHDGTRIPNVGCVLLFDEEPQATLETRCAVKVYRLRTTEKEYKREQLEEMPVTINGGTEE
CCCCCCCCCCCEEEEECCCCCHHHHHHHHEEEEEECCCHHHHHHHHHHHCCEEEECCHHH
VIRKTIDQVVKYIDGAAFRDGGKLVKLRYPAEALKEILVNAVIHRDYSLNDDIHVRIFDN
HHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
RIEVQSPGKLPGYMSLDNLYEERFSRNPNLVRMLHNLPNPVNHDIGEGLDTAKNELKKAG
EEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHCC
LVEPIFEEKDNAFLVTIKHQRIASVEEVVLSYLEENPGTEITNKLVRQLSGEDDMQKVKL
CCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH
ALQKLRAAGHIVPLDENASAFNFRYVKA
HHHHHHHCCCEEECCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA