Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yjhP [H]

Identifier: 74317094

GI number: 74317094

Start: 1134757

End: 1135503

Strand: Reverse

Name: yjhP [H]

Synonym: Tbd_1076

Alternate gene names: 74317094

Gene position: 1135503-1134757 (Counterclockwise)

Preceding gene: 74317095

Following gene: 74317093

Centisome position: 39.02

GC content: 63.99

Gene sequence:

>747_bases
GTGGACATTCCACGAATCTTCAACATCACCGAAAGCGCTCACCGCATCCACAACCCGTTCACCCCCGAAAAGCTCGCCAC
GCTCGGCGCGGCGCTGCGTCTGGAAGCGGGGGCACGCGTACTCGACCTCGGCAGCGGTTCGGGGGAGATGCTGTGCACCT
GGGCACGCGATCACGGGATCGTCGGCACCGGCATCGACCTGAGCCAGCTGTTCACCGAGCAAGCGAAACGCCGTGCCGAA
GCGCTCGGCGTTGCCGGCCAAGTGAAGTTCATCCACGGCGACGCCGCCGGCTACGTCTCGGACGAGAAGGTCGATGTGGC
AGCCTGTGTGGGTGCCAGTTGGATAGCCGGCGGCGTCGCCGGCACGATCACGCTGCTGGCGCAAAGCCTCGAACCGGGAG
GAATCATCCTCATGGGCGAGCCCTTCTGGCGCAAGTTGCCGACGACCGAAGCGGTTGCCAAGGCGTGTCATGCCAACACG
ATCTCCGACTTTCTGCTGCTTCCTGAATTTCTCGCCTCTTTCCGCAAGCTTGGCTACGACGTCGTCGAAATGGTTCTGGC
TGACCAGGACAGCTGGGACCGGTACGAGGCGGCCAAGTGGCTCACGATGCGCCGATGGCTCGACGCCAATCCCGAGGACG
AGCTCGCCGAAGAGGTTCGCGCGCAACTGAGCTCGGAACCCGAACGCTACGCGACTAACACCCGCGAATACCTGGGCTGG
GGCGTGTTCGCACTGATGGCACGGTGA

Upstream 100 bases:

>100_bases
CCTACCCGAATACCGCGGGTTCAGAAAACAGTGGCGGTAGCTCTCACAGCGCAACAATAACGCGGCCGGGTGAACCCTCA
CGCCAAGGAGGCTATCCGAA

Downstream 100 bases:

>100_bases
CGAGTGATGGCTCGGCGACGAATCAAAGGGGCCCGGCTCGAATATCCTGACGTGTTGCGCTAGCTGACCAGCAACGAATT
AGACGATGCCCCGCCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDIPRIFNITESAHRIHNPFTPEKLATLGAALRLEAGARVLDLGSGSGEMLCTWARDHGIVGTGIDLSQLFTEQAKRRAE
ALGVAGQVKFIHGDAAGYVSDEKVDVAACVGASWIAGGVAGTITLLAQSLEPGGIILMGEPFWRKLPTTEAVAKACHANT
ISDFLLLPEFLASFRKLGYDVVEMVLADQDSWDRYEAAKWLTMRRWLDANPEDELAEEVRAQLSSEPERYATNTREYLGW
GVFALMAR

Sequences:

>Translated_248_residues
MDIPRIFNITESAHRIHNPFTPEKLATLGAALRLEAGARVLDLGSGSGEMLCTWARDHGIVGTGIDLSQLFTEQAKRRAE
ALGVAGQVKFIHGDAAGYVSDEKVDVAACVGASWIAGGVAGTITLLAQSLEPGGIILMGEPFWRKLPTTEAVAKACHANT
ISDFLLLPEFLASFRKLGYDVVEMVLADQDSWDRYEAAKWLTMRRWLDANPEDELAEEVRAQLSSEPERYATNTREYLGW
GVFALMAR
>Mature_248_residues
MDIPRIFNITESAHRIHNPFTPEKLATLGAALRLEAGARVLDLGSGSGEMLCTWARDHGIVGTGIDLSQLFTEQAKRRAE
ALGVAGQVKFIHGDAAGYVSDEKVDVAACVGASWIAGGVAGTITLLAQSLEPGGIILMGEPFWRKLPTTEAVAKACHANT
ISDFLLLPEFLASFRKLGYDVVEMVLADQDSWDRYEAAKWLTMRRWLDANPEDELAEEVRAQLSSEPERYATNTREYLGW
GVFALMAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790760, Length=248, Percent_Identity=71.7741935483871, Blast_Score=379, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR017031 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27137; Mature: 27137

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPRIFNITESAHRIHNPFTPEKLATLGAALRLEAGARVLDLGSGSGEMLCTWARDHGI
CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCE
VGTGIDLSQLFTEQAKRRAEALGVAGQVKFIHGDAAGYVSDEKVDVAACVGASWIAGGVA
EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
GTITLLAQSLEPGGIILMGEPFWRKLPTTEAVAKACHANTISDFLLLPEFLASFRKLGYD
HHHHHHHHHCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
VVEMVLADQDSWDRYEAAKWLTMRRWLDANPEDELAEEVRAQLSSEPERYATNTREYLGW
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHH
GVFALMAR
HHHHHHCC
>Mature Secondary Structure
MDIPRIFNITESAHRIHNPFTPEKLATLGAALRLEAGARVLDLGSGSGEMLCTWARDHGI
CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCE
VGTGIDLSQLFTEQAKRRAEALGVAGQVKFIHGDAAGYVSDEKVDVAACVGASWIAGGVA
EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
GTITLLAQSLEPGGIILMGEPFWRKLPTTEAVAKACHANTISDFLLLPEFLASFRKLGYD
HHHHHHHHHCCCCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
VVEMVLADQDSWDRYEAAKWLTMRRWLDANPEDELAEEVRAQLSSEPERYATNTREYLGW
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHH
GVFALMAR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]