| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is htpG
Identifier: 74317096
GI number: 74317096
Start: 1137684
End: 1139585
Strand: Reverse
Name: htpG
Synonym: Tbd_1078
Alternate gene names: 74317096
Gene position: 1139585-1137684 (Counterclockwise)
Preceding gene: 74317098
Following gene: 74317095
Centisome position: 39.16
GC content: 62.93
Gene sequence:
>1902_bases ATGTCCGCCACCAGCAGCAAAGAAACCCTGGGCTTTCAAGCCGAAGTCAAACAGCTCCTGCAGCTGATGATCCATTCCTT GTATTCGAACAAGGACATATTCCTCCGCGAACTGATCTCCAACGCCTCCGACGCCGCCGACAAGCTGCGCTTCGAAGCCT TGTCGGACGCCGCGCTGTTCGAGAACGACCCCGAGCTCAAGATCCGCATCGCCTTCGACCGCGACGCGCGCACGCTCACC ATTTCCGACAACGGCATCGGCATGAGCCGGCAGGAGGTCATCGACCACATCGGCACGATCGCCAAGTCCGGCACGCGCGA ATTCTTCAGCCAGCTTTCCGGCGACCAGAAGAAGGACGCCGCGCTGATCGGCCAGTTCGGCGTCGGCTTCTATTCCGCCT TCATCGTCGCCGACCGCGTCACGCTCACGACCCGCCGCGCCGGCCTTACCGCCGAGCACGGTGTGCGCTGGGAATCCGAG GGCGCCGGCGACTACACGCTGGAAACGGTCGAGAAGCCCCAACGCGGCACCGAGATCGTGCTGCATCTGCGTGAAGGCGA GGACGAATTCCTCTCCGACTGGAAGATCAAGTCGGTCATCCGCACCTATTCCGACCACATCACGCTGCCGATCGTGATGA AGAAGACCGAATGGAAGGACGGCGTCGAGACGCCGACCGACGAGGACGAAACGGTCAACAAAGCCTCGGCCTTGTGGGCT CGCCCGAAGAAGGACATCAGCGACGACGAGTACAACGAGTTCTACAAGCACGTCGCCCACGACTTCGAGCCGCCGCTCGC CTGGTCGCATAACCGCGTCGAGGGCAAGCAGGAATACATCTCCCTGCTCTACGTGCCCTCGCACGCGCCGTTCGACCTCT ACGACCGAGAGAAGCGCCACGGCATCAAACTTTATGTGCGCCGCGTCTTCATCATGGACGACGCCGAGCAGCTGATGCCG CAATACCTGCGCTTCGTCCGCGGCGTCATCGACTCGGCCGACCTGCCCTTGAACGTCTCGCGCGAAATCCTGCAGTCGAG CCGCGACATCGACGCCATCAAGAACGGCTCGGTGAAGAAGGTGCTCGGCATGCTCGAAGACCTCGCCGAGAACCAGCCCG AAAAATACGTCGAGTTCTGGAAAGAGTTCGGCAAGGTCATGAAGGAAGGCCCGGGCGAGGACTTCGCCAACAAGGAGAAG ATCGCCGGCCTGCTCCGCTTCGCCTCCACCCACACCGACACCGACGCGCAGGTCGTGTCGCTCAAGGACTACGTCGGCCG CATGAAGGAAGGCCAGACCGCGATCTACTACATCACCGCCGACAGCTTCGCCGCCGCCCAGCACAGCCCGCACCTCGAAA TCTTCCGCAAGAAAGGCATCGAAGTCCTGCTGCTGTCCGACCGCGTCGACGAATGGCTCACCGGCAACCTGCATGAGTTC GACGGCAAGCCGCTCAAGTCCGTCGCCAAGGGCGGCCTCGACCTCGGCGAACTCGAAGACGAAGCCGAGAAGACCGCGCA GAAGGAAGCCGAGGAGTCGATGAAGCCGCTGGTCGAGCGCATCAAGGCCATGCTCGGCGAGCGCGTCAAGGACGTCCGCG TCACCCACCGCCTCACCGATTCGCCCGCCTGCCTCGTCACCGGCGAAGGCGACATGAGCGCCAACCTCGAACGGCTATTG AAAGCCGCCGGCCAAGCCGCGCCCACCGTGAAGCCCACGCTGGAGATCAACCCGTCGCACGCGTTGGTCACGCGGCTCGA CAGCGAATCCGACGAAGACCGCTTCAAGGACTGGGCCAACCTGCTGTTCGAGCAGGCGCTGCTGGCGGAAGGTGGACAGC TCGACGATCCGGCGAGTTTTGTGCGGCGGTTGAATGGGTTGCTGGCGATGTTGCCGGGTTGA
Upstream 100 bases:
>100_bases CGCACCGAGGCGCTGAGCATGGGGGGCTTGAAACTCGGCGCCGCCGCCCCCATCTCCGCTCCCACCTTGTTTGTACGTGT AACCAACGGGAGATAAAGGC
Downstream 100 bases:
>100_bases GGACGCAAGAGCCGTTCGTGTTGAGCTTGTCGAAACACGAATGACCTTAATTGTTGTATCCAACGCGACTGAGCAATCAG TCGCGTTTTTTATTGCTTTG
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 633; Mature: 632
Protein sequence:
>633_residues MSATSSKETLGFQAEVKQLLQLMIHSLYSNKDIFLRELISNASDAADKLRFEALSDAALFENDPELKIRIAFDRDARTLT ISDNGIGMSRQEVIDHIGTIAKSGTREFFSQLSGDQKKDAALIGQFGVGFYSAFIVADRVTLTTRRAGLTAEHGVRWESE GAGDYTLETVEKPQRGTEIVLHLREGEDEFLSDWKIKSVIRTYSDHITLPIVMKKTEWKDGVETPTDEDETVNKASALWA RPKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYDREKRHGIKLYVRRVFIMDDAEQLMP QYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKKVLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEK IAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEF DGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLL KAAGQAAPTVKPTLEINPSHALVTRLDSESDEDRFKDWANLLFEQALLAEGGQLDDPASFVRRLNGLLAMLPG
Sequences:
>Translated_633_residues MSATSSKETLGFQAEVKQLLQLMIHSLYSNKDIFLRELISNASDAADKLRFEALSDAALFENDPELKIRIAFDRDARTLT ISDNGIGMSRQEVIDHIGTIAKSGTREFFSQLSGDQKKDAALIGQFGVGFYSAFIVADRVTLTTRRAGLTAEHGVRWESE GAGDYTLETVEKPQRGTEIVLHLREGEDEFLSDWKIKSVIRTYSDHITLPIVMKKTEWKDGVETPTDEDETVNKASALWA RPKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYDREKRHGIKLYVRRVFIMDDAEQLMP QYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKKVLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEK IAGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEF DGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLL KAAGQAAPTVKPTLEINPSHALVTRLDSESDEDRFKDWANLLFEQALLAEGGQLDDPASFVRRLNGLLAMLPG >Mature_632_residues SATSSKETLGFQAEVKQLLQLMIHSLYSNKDIFLRELISNASDAADKLRFEALSDAALFENDPELKIRIAFDRDARTLTI SDNGIGMSRQEVIDHIGTIAKSGTREFFSQLSGDQKKDAALIGQFGVGFYSAFIVADRVTLTTRRAGLTAEHGVRWESEG AGDYTLETVEKPQRGTEIVLHLREGEDEFLSDWKIKSVIRTYSDHITLPIVMKKTEWKDGVETPTDEDETVNKASALWAR PKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYDREKRHGIKLYVRRVFIMDDAEQLMPQ YLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKKVLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEKI AGLLRFASTHTDTDAQVVSLKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEFD GKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTDSPACLVTGEGDMSANLERLLK AAGQAAPTVKPTLEINPSHALVTRLDSESDEDRFKDWANLLFEQALLAEGGQLDDPASFVRRLNGLLAMLPG
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI4507677, Length=687, Percent_Identity=38.5735080058224, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI155722983, Length=634, Percent_Identity=35.9621451104101, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI154146191, Length=412, Percent_Identity=41.9902912621359, Blast_Score=302, Evalue=6e-82, Organism=Homo sapiens, GI153792590, Length=414, Percent_Identity=41.7874396135266, Blast_Score=299, Evalue=4e-81, Organism=Homo sapiens, GI20149594, Length=207, Percent_Identity=45.4106280193237, Blast_Score=188, Evalue=1e-47, Organism=Escherichia coli, GI1786679, Length=623, Percent_Identity=64.6869983948636, Blast_Score=836, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=674, Percent_Identity=40.8011869436202, Blast_Score=487, Evalue=1e-138, Organism=Caenorhabditis elegans, GI17542208, Length=675, Percent_Identity=39.1111111111111, Blast_Score=414, Evalue=1e-116, Organism=Caenorhabditis elegans, GI115535205, Length=650, Percent_Identity=34.3076923076923, Blast_Score=324, Evalue=8e-89, Organism=Caenorhabditis elegans, GI115535167, Length=426, Percent_Identity=36.150234741784, Blast_Score=256, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6323840, Length=679, Percent_Identity=40.500736377025, Blast_Score=479, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6325016, Length=685, Percent_Identity=39.8540145985401, Blast_Score=475, Evalue=1e-135, Organism=Drosophila melanogaster, GI17647529, Length=684, Percent_Identity=39.766081871345, Blast_Score=481, Evalue=1e-136, Organism=Drosophila melanogaster, GI21357739, Length=686, Percent_Identity=38.7755102040816, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI24586016, Length=644, Percent_Identity=35.0931677018634, Blast_Score=364, Evalue=1e-100,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_THIDA (Q3SJW8)
Other databases:
- EMBL: CP000116 - RefSeq: YP_314836.1 - ProteinModelPortal: Q3SJW8 - SMR: Q3SJW8 - STRING: Q3SJW8 - GeneID: 3673771 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_1078 - NMPDR: fig|292415.3.peg.1078 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: AIYYITA - PhylomeDB: Q3SJW8 - ProtClustDB: PRK05218 - BioCyc: TDEN292415:TBD_1078-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71168; Mature: 71037
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATSSKETLGFQAEVKQLLQLMIHSLYSNKDIFLRELISNASDAADKLRFEALSDAALF CCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHH ENDPELKIRIAFDRDARTLTISDNGIGMSRQEVIDHIGTIAKSGTREFFSQLSGDQKKDA CCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH ALIGQFGVGFYSAFIVADRVTLTTRRAGLTAEHGVRWESEGAGDYTLETVEKPQRGTEIV HHHHHHHHHHHHHHHHHHHHEEEEHHCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCEEE LHLREGEDEFLSDWKIKSVIRTYSDHITLPIVMKKTEWKDGVETPTDEDETVNKASALWA EEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC RPKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYDREKRH CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHC GIKLYVRRVFIMDDAEQLMPQYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKK CHHEEHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHCCCCHHH VLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVS HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEE LKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEF HHHHHHHHCCCCEEEEEEECCCHHHHCCCCHHHHHHHCCCEEEEECCHHHHHHCCCCHHC DGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTD CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPACLVTGEGDMSANLERLLKAAGQAAPTVKPTLEINPSHALVTRLDSESDEDRFKDWAN CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHEECCCCCCHHHHHHHHH LLFEQALLAEGGQLDDPASFVRRLNGLLAMLPG HHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCC >Mature Secondary Structure SATSSKETLGFQAEVKQLLQLMIHSLYSNKDIFLRELISNASDAADKLRFEALSDAALF CCCCCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHH ENDPELKIRIAFDRDARTLTISDNGIGMSRQEVIDHIGTIAKSGTREFFSQLSGDQKKDA CCCCCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHH ALIGQFGVGFYSAFIVADRVTLTTRRAGLTAEHGVRWESEGAGDYTLETVEKPQRGTEIV HHHHHHHHHHHHHHHHHHHHEEEEHHCCCCHHHCCCCCCCCCCCCCHHHHHCCCCCCEEE LHLREGEDEFLSDWKIKSVIRTYSDHITLPIVMKKTEWKDGVETPTDEDETVNKASALWA EEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHC RPKKDISDDEYNEFYKHVAHDFEPPLAWSHNRVEGKQEYISLLYVPSHAPFDLYDREKRH CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHC GIKLYVRRVFIMDDAEQLMPQYLRFVRGVIDSADLPLNVSREILQSSRDIDAIKNGSVKK CHHEEHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHCCCCHHH VLGMLEDLAENQPEKYVEFWKEFGKVMKEGPGEDFANKEKIAGLLRFASTHTDTDAQVVS HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHEEE LKDYVGRMKEGQTAIYYITADSFAAAQHSPHLEIFRKKGIEVLLLSDRVDEWLTGNLHEF HHHHHHHHCCCCEEEEEEECCCHHHHCCCCHHHHHHHCCCEEEEECCHHHHHHCCCCHHC DGKPLKSVAKGGLDLGELEDEAEKTAQKEAEESMKPLVERIKAMLGERVKDVRVTHRLTD CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPACLVTGEGDMSANLERLLKAAGQAAPTVKPTLEINPSHALVTRLDSESDEDRFKDWAN CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHEECCCCCCHHHHHHHHH LLFEQALLAEGGQLDDPASFVRRLNGLLAMLPG HHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA