The gene/protein map for NC_007404 is currently unavailable.
Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yceI [C]

Identifier: 74317049

GI number: 74317049

Start: 1096321

End: 1096911

Strand: Direct

Name: yceI [C]

Synonym: Tbd_1031

Alternate gene names: 74317049

Gene position: 1096321-1096911 (Clockwise)

Preceding gene: 74317048

Following gene: 74317050

Centisome position: 37.68

GC content: 62.77

Gene sequence:

>591_bases
ATGAACCGTCTTGCCACCCTTGCATCAATTCTGTCCGCCGGCTTCGTGCTGTCCGCGCAGGCCGCGCCCGTGACCTACGT
CATCGACAACAGTCACACCTACCCGCACTTCACCTACAACCATCTGGGCTTCTCGAACCAGACGCACAAATTCGACAAGA
CCAGCGGCAAGATCGTGATCGACCGCGCCGCGAAGACCGGATCGGCCGACGTGACGATCGAGGCGACCTCGGTGAATACC
GGTTACGCCCTGTTCAACGAGCATATCCAGGGCGCCGACTACTTCGACACGGCGAAGTACCCGACGATCCGCTTCAAGGC
GGACGCGATGCAGTTCAAGGGCGACGTCCCCGCGAGCCTGAGCGGCGCGCTCACCATCAAGGGCGTGACCAAGCCGGTCA
GCCTGACGATCACCCACTTCAAATGCCAGCCGCACCCGATGCTCAAGGTCGATGCCTGCGGCGCCAACGCCACCACGCAG
GTCAAGCGCTCGGAATTCAACATGGGCAAGAACGCGCCCTACGTCAGCGACGAAGTCACGCTGAACCTCGCGATCGAGGC
CGTGAAGGAGCACGCGCCGGCCGCCGAGTAG

Upstream 100 bases:

>100_bases
ATGTGGGCCGACGTCTCGGCCGTCGCCAACGAAGTCCGGGTCAAGTTCCGAATTGCCGCCCGCGGCAACTAACCGTGCTC
ATCCACCGAAGGAGATCGAA

Downstream 100 bases:

>100_bases
CCGAGCGCTCGCCAGTCCGCCGGCCCGACCCGGCGGGTGGCGCGTAACCCGTCGCCGCGGCGGTATTCCGTCACATTGCG
GCGCGCGGCGTCGCCCCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MNRLATLASILSAGFVLSAQAAPVTYVIDNSHTYPHFTYNHLGFSNQTHKFDKTSGKIVIDRAAKTGSADVTIEATSVNT
GYALFNEHIQGADYFDTAKYPTIRFKADAMQFKGDVPASLSGALTIKGVTKPVSLTITHFKCQPHPMLKVDACGANATTQ
VKRSEFNMGKNAPYVSDEVTLNLAIEAVKEHAPAAE

Sequences:

>Translated_196_residues
MNRLATLASILSAGFVLSAQAAPVTYVIDNSHTYPHFTYNHLGFSNQTHKFDKTSGKIVIDRAAKTGSADVTIEATSVNT
GYALFNEHIQGADYFDTAKYPTIRFKADAMQFKGDVPASLSGALTIKGVTKPVSLTITHFKCQPHPMLKVDACGANATTQ
VKRSEFNMGKNAPYVSDEVTLNLAIEAVKEHAPAAE
>Mature_196_residues
MNRLATLASILSAGFVLSAQAAPVTYVIDNSHTYPHFTYNHLGFSNQTHKFDKTSGKIVIDRAAKTGSADVTIEATSVNT
GYALFNEHIQGADYFDTAKYPTIRFKADAMQFKGDVPASLSGALTIKGVTKPVSLTITHFKCQPHPMLKVDACGANATTQ
VKRSEFNMGKNAPYVSDEVTLNLAIEAVKEHAPAAE

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=189, Percent_Identity=33.8624338624339, Blast_Score=81, Evalue=4e-17,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 21124; Mature: 21124

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLATLASILSAGFVLSAQAAPVTYVIDNSHTYPHFTYNHLGFSNQTHKFDKTSGKIVI
CCHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCEECCCCCEEEE
DRAAKTGSADVTIEATSVNTGYALFNEHIQGADYFDTAKYPTIRFKADAMQFKGDVPASL
EECCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCC
SGALTIKGVTKPVSLTITHFKCQPHPMLKVDACGANATTQVKRSEFNMGKNAPYVSDEVT
CCEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCCCCCEEEHHHCCCCCCCCCCCCCEE
LNLAIEAVKEHAPAAE
EEEEEEEHHHCCCCCC
>Mature Secondary Structure
MNRLATLASILSAGFVLSAQAAPVTYVIDNSHTYPHFTYNHLGFSNQTHKFDKTSGKIVI
CCHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCEECCCCCEEEE
DRAAKTGSADVTIEATSVNTGYALFNEHIQGADYFDTAKYPTIRFKADAMQFKGDVPASL
EECCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCEEECCCCCCCC
SGALTIKGVTKPVSLTITHFKCQPHPMLKVDACGANATTQVKRSEFNMGKNAPYVSDEVT
CCEEEEEECCCCEEEEEEEEEECCCCCEEEEECCCCCCCEEEHHHCCCCCCCCCCCCCEE
LNLAIEAVKEHAPAAE
EEEEEEEHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA