Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yceI [C]

Identifier: 74317048

GI number: 74317048

Start: 1095732

End: 1096292

Strand: Direct

Name: yceI [C]

Synonym: Tbd_1030

Alternate gene names: 74317048

Gene position: 1095732-1096292 (Clockwise)

Preceding gene: 74317047

Following gene: 74317049

Centisome position: 37.66

GC content: 67.74

Gene sequence:

>561_bases
ATGAGGTCGACACTGAGACTGGCCGCGCTGCTGGCCGCGTTTACCGCGCCCGCGGCGCACGCCGTCGAGTACCGCACTGT
GCTGCCGGAAAAGAGCACGCTTGCCTTCGAATTCCGCCAGATGGGCGTTCCGGTTAAAGGCGGCTTCAAGCGCTTCGCCA
CTGCGTTGCGCTTCGACCCGGCCAGACCCGAAGCGGGGCAGGCGCGGATCGAGATCGACCTCGCCAGCATCGACGCCGGT
TCGCCCGAGGCCGACGAGGAGGCCGCCGGGAAGCTCTGGTTCAACCGCAGCGTCTTTCCGAAGGCGACTTTCGTCTCGCG
CGAGGTGCGTGCGCTCGGCGGCAACCGCTACGCCCTGGACGGCACGCTGACGCTCAAGGGCAAAAGCCGCCCGCTGACGG
TGCCCGTCACCTATACGCCAGGGCGCGAGGTCGCCACGTTCGACGGCGCCTTCGTCCTCAAGCGCCTCGATTTCGGCATC
GGCGAGGGCATGTGGGCCGACGTCTCGGCCGTCGCCAACGAAGTCCGGGTCAAGTTCCGAATTGCCGCCCGCGGCAACTA
A

Upstream 100 bases:

>100_bases
TGGCTTTGGTCGTCGTCCACGTCGCGGCGGCCCTGCAGCATCACTTCATCGAACGTCACCCGTTCCTGCAGCGCATGGGC
TGGGGAAGAAAGGAGTTGTC

Downstream 100 bases:

>100_bases
CCGTGCTCATCCACCGAAGGAGATCGAAATGAACCGTCTTGCCACCCTTGCATCAATTCTGTCCGCCGGCTTCGTGCTGT
CCGCGCAGGCCGCGCCCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MRSTLRLAALLAAFTAPAAHAVEYRTVLPEKSTLAFEFRQMGVPVKGGFKRFATALRFDPARPEAGQARIEIDLASIDAG
SPEADEEAAGKLWFNRSVFPKATFVSREVRALGGNRYALDGTLTLKGKSRPLTVPVTYTPGREVATFDGAFVLKRLDFGI
GEGMWADVSAVANEVRVKFRIAARGN

Sequences:

>Translated_186_residues
MRSTLRLAALLAAFTAPAAHAVEYRTVLPEKSTLAFEFRQMGVPVKGGFKRFATALRFDPARPEAGQARIEIDLASIDAG
SPEADEEAAGKLWFNRSVFPKATFVSREVRALGGNRYALDGTLTLKGKSRPLTVPVTYTPGREVATFDGAFVLKRLDFGI
GEGMWADVSAVANEVRVKFRIAARGN
>Mature_186_residues
MRSTLRLAALLAAFTAPAAHAVEYRTVLPEKSTLAFEFRQMGVPVKGGFKRFATALRFDPARPEAGQARIEIDLASIDAG
SPEADEEAAGKLWFNRSVFPKATFVSREVRALGGNRYALDGTLTLKGKSRPLTVPVTYTPGREVATFDGAFVLKRLDFGI
GEGMWADVSAVANEVRVKFRIAARGN

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 20190; Mature: 20190

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSTLRLAALLAAFTAPAAHAVEYRTVLPEKSTLAFEFRQMGVPVKGGFKRFATALRFDP
CCCHHHHHHHHHHHHCCCHHHEEHEEECCCCCHHEEEHHHCCCCCCCCHHHHHHHHHCCC
ARPEAGQARIEIDLASIDAGSPEADEEAAGKLWFNRSVFPKATFVSREVRALGGNRYALD
CCCCCCCEEEEEEEEECCCCCCCCCCHHCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
GTLTLKGKSRPLTVPVTYTPGREVATFDGAFVLKRLDFGIGEGMWADVSAVANEVRVKFR
EEEEECCCCCCEEEEEEECCCCCEEEECHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEE
IAARGN
EEECCC
>Mature Secondary Structure
MRSTLRLAALLAAFTAPAAHAVEYRTVLPEKSTLAFEFRQMGVPVKGGFKRFATALRFDP
CCCHHHHHHHHHHHHCCCHHHEEHEEECCCCCHHEEEHHHCCCCCCCCHHHHHHHHHCCC
ARPEAGQARIEIDLASIDAGSPEADEEAAGKLWFNRSVFPKATFVSREVRALGGNRYALD
CCCCCCCEEEEEEEEECCCCCCCCCCHHCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEE
GTLTLKGKSRPLTVPVTYTPGREVATFDGAFVLKRLDFGIGEGMWADVSAVANEVRVKFR
EEEEECCCCCCEEEEEEECCCCCEEEECHHHHHHHHCCCCCCCCCHHHHHHHHEEEEEEE
IAARGN
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA