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The map label for this gene is yoaA [H]

Identifier: 74317015

GI number: 74317015

Start: 1064266

End: 1066197

Strand: Direct

Name: yoaA [H]

Synonym: Tbd_0997

Alternate gene names: 74317015

Gene position: 1064266-1066197 (Clockwise)

Preceding gene: 74317012

Following gene: 74317020

Centisome position: 36.58

GC content: 67.7

Gene sequence:

>1932_bases
ATGTCCGATCTGACCCACTTTTTTTCTCCGGAAGGCGCCTGCGCGGCGGTTCTCCCGGGGTGGCGCGCGCGCCCGCAGCA
GCTCGCCATGGCCGAGGCGGTCGAGCGCGCGATCGCCGGCAATCTGACCTTGCTCGCCGAGGCCGGGACCGGCACGGGAA
AGACGCTCGCCTACCTCATCCCCGCCCTGCGCTCGGGCGGCAAGGTAGTGATCTCGACCGGTACCAAGGCGCTGCAGGAT
CAGCTCTTCCATCGCGATCTGCCGGCCGCGCGCCGCGCGCTGAAGTCGCCGGTCAAGGTGGCACTGCTCAAGGGGCGTGC
CAATTACGTCTGCCACCATCATCTGCAGCGCAACCTGGCGGACGGCCGTTTTGCCCACCGCGACGACGCCGCGTGGTTGC
AGAAGATCGCACGCTTCGCCGAGGCGAGCGCCAGCGGCGACCGGGCCGAGGCCGAGGGCATTCCCGAGGACGCGACGGCC
TGGCAATACGCCGTGTCGACTCGCGACACCTGCCTCGGCAGCGAGTGCGCACACTTCAAGGACTGTTTCGTCATGGCGGC
GCGCAAGGCCGCGCTCGACGCCGAGGTCGTCGTGGTCAACCACCACTTGTTCTTTGCCGACCTCTGGCTCAAGGACGAAG
GCGTCGCCGAACTGCTGCCGGCCTGCAACACGGTGATTCTCGACGAGGCCCATCAGCTCGCCGAAACCGCCGCGCAGTTC
TTCGGCGAAACGCTGTCGACGGCCCAGCTGCTCGATCTGGCCGGCGACACCAAGCGTCTGGCGGCGGTCAAGGCCGGCGA
TTTTCCGGCCCTGCGGCGTGCGGCCGAGGATCTGGCCAAGGCCGCGCGCGATCTGCGTCTCGCCTTGCCGCAAAACCCGC
TCAAGTCGACGCTCGCCGAAATTGGGCGCCACGAAAAATGGCCGGACGCGCTGGCGGGGCTATCGACCGCGCTCGGCGCT
GCGCGCAAGCTGCTCGAAACCCAGGCCGAGCGCGATGCCGACCTCAAGAATTGTCACGAGCGCGCAGAGGCGCTTGCCGC
GACGCTCGATCGGTGGCGGCGCGACGACGAACCTGACGCCCCCCGGGTGCGCTGGCTCGAGACCACGATGAGTTCGCTGC
TGCTGCATGCCACGCCGCTTTCGGTCGGCAGCCTGTTCGGCGCCAAGCTCACCGAACGTGCGCAGGCGTGGATCCTGACC
TCGGCGACACTGTCGGTCGGCGGCGACTTCAGCCACCTGAAAACCCGGCTCGGCATCGAGGAGGCGGAAACCCTCTGCGT
CGACAGCCCCTTCGACTACCCGCGGCAGGGCGTGCTCTACGTGCCGCCGAACCTGCCCGCGCCGAATACGCCGAGCTTCA
CCGAGGCGGTCGTCGACGCCGCGTTGCCGGTGCTCGAAATCAGCCAGGGGCGCGCCTTCATTCTGTTCACGAGCTTGCGC
GCACTGGAAAAGGCGCGCGAATTGCTCGCTGCCGCGTTCACGTTCCGCGGCTGGGCGTTTCCCTTGCTGGTGCAGGGAGA
GGCGCCGAAAAACGAACTGCTCGCACGTTTCCAGCAATCCGGCAACGCCGTCCTGCTCGGCAGCCAGAGCTTCTGGGAGG
GCGTCGACATGCCGGGCGACGTGCTCTCTGTCGTCATCATCGACAAGCTGCCCTTCCAGCCGCCCGACGATCCCGTCGTC
GCAGCCCGCATCGCGCATCTCGAGAAAAGCGGCGGCAAGCCCTTCATGGACTACCAGCTGCCGCACGCGGCGATCAGCCT
CAAGCAGGGGGCGGGGCGGCTGATTCGCACCGAGACCGATCGGGGGGTGCTGATGATTTGTGATACGCGGCTGGCGGAGA
AGCCGTACGGGCGCTTGCTGCTCAATGCGCTGCCGGCGATGACGCGGACGCGGAAGCTGGAGGTGGTGGAGCGGTTTTTT
TGCGGCGCATGA

Upstream 100 bases:

>100_bases
TCCGGACCTAACGACAGAATGGGGGCAAAACTAAAGGGGCGGACGCCCGGGGCCTTGCCTACCCGATGGTAAACTCGATG
CCGCTCAATCCGGTCTCGAC

Downstream 100 bases:

>100_bases
GGGTTCGCCGGTTGGTGCGAGGGATGCGAAGCAAAGTGGTTGAGTTTGGGCGCGGAGCAGTGGTTAGGTTTCGCTGGACT
GCTGACCGTTGGCCGGGGGT

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MSDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGTGTGKTLAYLIPALRSGGKVVISTGTKALQD
QLFHRDLPAARRALKSPVKVALLKGRANYVCHHHLQRNLADGRFAHRDDAAWLQKIARFAEASASGDRAEAEGIPEDATA
WQYAVSTRDTCLGSECAHFKDCFVMAARKAALDAEVVVVNHHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQF
FGETLSTAQLLDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAEIGRHEKWPDALAGLSTALGA
ARKLLETQAERDADLKNCHERAEALAATLDRWRRDDEPDAPRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILT
SATLSVGGDFSHLKTRLGIEEAETLCVDSPFDYPRQGVLYVPPNLPAPNTPSFTEAVVDAALPVLEISQGRAFILFTSLR
ALEKARELLAAAFTFRGWAFPLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGDVLSVVIIDKLPFQPPDDPVV
AARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETDRGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFF
CGA

Sequences:

>Translated_643_residues
MSDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGTGTGKTLAYLIPALRSGGKVVISTGTKALQD
QLFHRDLPAARRALKSPVKVALLKGRANYVCHHHLQRNLADGRFAHRDDAAWLQKIARFAEASASGDRAEAEGIPEDATA
WQYAVSTRDTCLGSECAHFKDCFVMAARKAALDAEVVVVNHHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQF
FGETLSTAQLLDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAEIGRHEKWPDALAGLSTALGA
ARKLLETQAERDADLKNCHERAEALAATLDRWRRDDEPDAPRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILT
SATLSVGGDFSHLKTRLGIEEAETLCVDSPFDYPRQGVLYVPPNLPAPNTPSFTEAVVDAALPVLEISQGRAFILFTSLR
ALEKARELLAAAFTFRGWAFPLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGDVLSVVIIDKLPFQPPDDPVV
AARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETDRGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFF
CGA
>Mature_642_residues
SDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGTGTGKTLAYLIPALRSGGKVVISTGTKALQDQ
LFHRDLPAARRALKSPVKVALLKGRANYVCHHHLQRNLADGRFAHRDDAAWLQKIARFAEASASGDRAEAEGIPEDATAW
QYAVSTRDTCLGSECAHFKDCFVMAARKAALDAEVVVVNHHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQFF
GETLSTAQLLDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAEIGRHEKWPDALAGLSTALGAA
RKLLETQAERDADLKNCHERAEALAATLDRWRRDDEPDAPRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILTS
ATLSVGGDFSHLKTRLGIEEAETLCVDSPFDYPRQGVLYVPPNLPAPNTPSFTEAVVDAALPVLEISQGRAFILFTSLRA
LEKARELLAAAFTFRGWAFPLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGDVLSVVIIDKLPFQPPDDPVVA
ARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETDRGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFFC
GA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=640, Percent_Identity=44.53125, Blast_Score=513, Evalue=1e-146,
Organism=Escherichia coli, GI1787018, Length=683, Percent_Identity=27.9648609077599, Blast_Score=172, Evalue=7e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 69895; Mature: 69764

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGTGTGKTLAYLI
CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH
PALRSGGKVVISTGTKALQDQLFHRDLPAARRALKSPVKVALLKGRANYVCHHHLQRNLA
HHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHCC
DGRFAHRDDAAWLQKIARFAEASASGDRAEAEGIPEDATAWQYAVSTRDTCLGSECAHFK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHCCCCHHCCCHHHHHH
DCFVMAARKAALDAEVVVVNHHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQF
HHHHHHHHHHHCCCEEEEEECEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
FGETLSTAQLLDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAE
HHHHHHHHHHHHHCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IGRHEKWPDALAGLSTALGAARKLLETQAERDADLKNCHERAEALAATLDRWRRDDEPDA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILTSATLSVGGDFSHLKTRLGIE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCHHHHHHHHCHH
EAETLCVDSPFDYPRQGVLYVPPNLPAPNTPSFTEAVVDAALPVLEISQGRAFILFTSLR
HHHHEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEHHHHH
ALEKARELLAAAFTFRGWAFPLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGD
HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCHHHCCCCCCHH
VLSVVIIDKLPFQPPDDPVVAARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETD
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC
RGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFFCGA
CCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDLTHFFSPEGACAAVLPGWRARPQQLAMAEAVERAIAGNLTLLAEAGTGTGKTLAYLI
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH
PALRSGGKVVISTGTKALQDQLFHRDLPAARRALKSPVKVALLKGRANYVCHHHLQRNLA
HHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHCC
DGRFAHRDDAAWLQKIARFAEASASGDRAEAEGIPEDATAWQYAVSTRDTCLGSECAHFK
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHCCCCHHCCCHHHHHH
DCFVMAARKAALDAEVVVVNHHLFFADLWLKDEGVAELLPACNTVILDEAHQLAETAAQF
HHHHHHHHHHHCCCEEEEEECEEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
FGETLSTAQLLDLAGDTKRLAAVKAGDFPALRRAAEDLAKAARDLRLALPQNPLKSTLAE
HHHHHHHHHHHHHCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IGRHEKWPDALAGLSTALGAARKLLETQAERDADLKNCHERAEALAATLDRWRRDDEPDA
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PRVRWLETTMSSLLLHATPLSVGSLFGAKLTERAQAWILTSATLSVGGDFSHLKTRLGIE
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEEHHCCCCCHHHHHHHHCHH
EAETLCVDSPFDYPRQGVLYVPPNLPAPNTPSFTEAVVDAALPVLEISQGRAFILFTSLR
HHHHEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEHHHHH
ALEKARELLAAAFTFRGWAFPLLVQGEAPKNELLARFQQSGNAVLLGSQSFWEGVDMPGD
HHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCEEEECCCHHHCCCCCCHH
VLSVVIIDKLPFQPPDDPVVAARIAHLEKSGGKPFMDYQLPHAAISLKQGAGRLIRTETD
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC
RGVLMICDTRLAEKPYGRLLLNALPAMTRTRKLEVVERFFCGA
CCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]