Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74316995

Identifier: 74316995

GI number: 74316995

Start: 1041654

End: 1042331

Strand: Reverse

Name: 74316995

Synonym: Tbd_0977

Alternate gene names: NA

Gene position: 1042331-1041654 (Counterclockwise)

Preceding gene: 74316996

Following gene: 74316994

Centisome position: 35.82

GC content: 70.06

Gene sequence:

>678_bases
ATGAAGCGTCTGATCGTGCTTGCCTTCCCGCTTCTGCTCGCGGCCTGCGGCAGCGGAGGCCCGCCGCCGCCCGACTGGAA
GACCGATTCGGCCGATCTGGTCGCGCGTTATCAGAAGCACGCGCTGCGCGGCGAAAACACGCTCGCCGAGCGCTACTTCC
AGCAGGCCGTCGCCGCGACCGGAGGCGCCGGCCGAGTCCGCGAGACCGCGCGCCTGTGGCTTGTGCGTTGCGCCACCCGT
CGCGCGATGCTGATCGACGATTCATGCGCCGAATATGCGGAACTCGCCGCGACCGAGGCCAAGCCCGATGCCGAGGACGC
GGCCTACTTCCGCTTCGTCACCCTGCGCTGGCAGGATCTCGATCCGAGCCTGCTGCCCCGGCAGCATCGCGCGCTGCTCC
GCGCCGAGGCCGCGCGCCGGCACGAGGCCCTCGCCGCGATCGACCATCCGCTCGCGCGTTTGCTCGACGCGAGCCTGCTG
CTCATGCGCGGCGAAGCCGGACCCGCCACGCTGTCGCTCGCGACGGAAACCGCCTCGTCGAACGGCTGGCGCCACCCGCT
GTTGACCTATCTCAAACTCGAGCAAGCGCAGGCCGCCAGCCGCGGCGATCACGCAACCGAGGCGCGCCTGGCACGACGCA
TTCGTCTCGTCGAGGAAAATATCGCGGCCTCACCCTGA

Upstream 100 bases:

>100_bases
TGCGCAGCGAAATCGACGACGCCGTGCGCAAGGCCAACGCGCTCGTCAACGAGATCAACAAGAAGTGGCCGTTTGCGCGC
GACCCAGAGGTGAAGCTGCC

Downstream 100 bases:

>100_bases
CCGGTTTAACGCCCTGCGGGCTGCTGCGCCGGCCGATGCTCGACGCCATGCGCGTGTCGGTGCACGCGCCGCGGAACCGG
CGCCAAAGCCCGGCCCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAATGGAGRVRETARLWLVRCATR
RAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDLDPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLL
LMRGEAGPATLSLATETASSNGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP

Sequences:

>Translated_225_residues
MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAATGGAGRVRETARLWLVRCATR
RAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDLDPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLL
LMRGEAGPATLSLATETASSNGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP
>Mature_225_residues
MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAATGGAGRVRETARLWLVRCATR
RAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDLDPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLL
LMRGEAGPATLSLATETASSNGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24723; Mature: 24723

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAAT
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GGAGRVRETARLWLVRCATRRAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDL
CCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCC
DPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLLLMRGEAGPATLSLATETASS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
NGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRLIVLAFPLLLAACGSGGPPPPDWKTDSADLVARYQKHALRGENTLAERYFQQAVAAT
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
GGAGRVRETARLWLVRCATRRAMLIDDSCAEYAELAATEAKPDAEDAAYFRFVTLRWQDL
CCCHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEECCC
DPSLLPRQHRALLRAEAARRHEALAAIDHPLARLLDASLLLMRGEAGPATLSLATETASS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
NGWRHPLLTYLKLEQAQAASRGDHATEARLARRIRLVEENIAASP
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA