Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316996

Identifier: 74316996

GI number: 74316996

Start: 1042328

End: 1043254

Strand: Reverse

Name: 74316996

Synonym: Tbd_0978

Alternate gene names: NA

Gene position: 1043254-1042328 (Counterclockwise)

Preceding gene: 74316997

Following gene: 74316995

Centisome position: 35.85

GC content: 65.59

Gene sequence:

>927_bases
ATGAACAAACTGCATTTCAAGGTCGGGCTTTTTGCCGCGACGTCGCTCTTTCTCGCCGCGGTGTTCGTCGTCTATCTGCT
GCACGCGCGCGGCTTTTTCGAAGACATCTTCGAGCTGCGACTCGCGGCGGCGAGCGCCGACGGCGTGGCGCCCGGCGTCC
CGGTCGTGTTCTCCGGCATCGAAATCGGCCGCGTCAGCACGCTGGGCCTCAACGACGACGGCGGCATCGTGATCCGCGCC
GAGTTTCTCGAGCGCAATGCCAAATGGCTGCGCGAAACCAGCACCTTCACGCTCGACAAGCCGCTGGTCGGCGGGGCGAA
GATACGCGTCGATTCACCCGACCTCGACGCGCCCACGCTGGCCGACGGCTCGACGGTCCTGCTGCTCAGTTCCGACGTCA
GCAAGGAAATCCCCGCGCTCGTCGAGCGCGTCAAGGCCATCCTCGCCAACGTCGAACATCTGACGCGCAAGGACGGCGAA
GTCAACGCGACGCTCGCCAACGTCGAGAAGCTCACCGGGCGCATGACCGGCGAATACGGCATGCTCGAAGGCCTGCTCGG
CAGCGCGGAGAAGGCGCGCGCAGTCACCGATTCGCTCGACAAGACCCGCGCCCTGATCACCAAACTCGACGGCATCGCGC
TGAAAACCGACCGCTGGCTGTTCGCGCCCGACGGCGTCGCCGAGGAGACACGGGCCTCGCTCGCCCAGGTCAGGCTGATG
CTGAACGACGCGCAGGCGAGCCTGAAGAAGGCCGATGCGGTGATGGCGAACGCCGTCGACATTTCGGCCGACGTCAAGCA
GGGCACGCAGGACATCGCCGCCCTGCGCAGCGAAATCGACGACGCCGTGCGCAAGGCCAACGCGCTCGTCAACGAGATCA
ACAAGAAGTGGCCGTTTGCGCGCGACCCAGAGGTGAAGCTGCCATGA

Upstream 100 bases:

>100_bases
TCATCCGCCAGCTAGCGGCGACCGCCGAAACCGGCGGGACCTGGGATATCTACGACTTCGACTGGAACCGGGTGCTCTAC
GCGCCCGCCACGCATTCGGA

Downstream 100 bases:

>100_bases
AGCGTCTGATCGTGCTTGCCTTCCCGCTTCTGCTCGCGGCCTGCGGCAGCGGAGGCCCGCCGCCGCCCGACTGGAAGACC
GATTCGGCCGATCTGGTCGC

Product: ABC-type transport system periplasmic component

Products: NA

Alternate protein names: ABC-Type Transport System Periplasmic Component; Mammalian Cell Entry Related Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNKLHFKVGLFAATSLFLAAVFVVYLLHARGFFEDIFELRLAAASADGVAPGVPVVFSGIEIGRVSTLGLNDDGGIVIRA
EFLERNAKWLRETSTFTLDKPLVGGAKIRVDSPDLDAPTLADGSTVLLLSSDVSKEIPALVERVKAILANVEHLTRKDGE
VNATLANVEKLTGRMTGEYGMLEGLLGSAEKARAVTDSLDKTRALITKLDGIALKTDRWLFAPDGVAEETRASLAQVRLM
LNDAQASLKKADAVMANAVDISADVKQGTQDIAALRSEIDDAVRKANALVNEINKKWPFARDPEVKLP

Sequences:

>Translated_308_residues
MNKLHFKVGLFAATSLFLAAVFVVYLLHARGFFEDIFELRLAAASADGVAPGVPVVFSGIEIGRVSTLGLNDDGGIVIRA
EFLERNAKWLRETSTFTLDKPLVGGAKIRVDSPDLDAPTLADGSTVLLLSSDVSKEIPALVERVKAILANVEHLTRKDGE
VNATLANVEKLTGRMTGEYGMLEGLLGSAEKARAVTDSLDKTRALITKLDGIALKTDRWLFAPDGVAEETRASLAQVRLM
LNDAQASLKKADAVMANAVDISADVKQGTQDIAALRSEIDDAVRKANALVNEINKKWPFARDPEVKLP
>Mature_308_residues
MNKLHFKVGLFAATSLFLAAVFVVYLLHARGFFEDIFELRLAAASADGVAPGVPVVFSGIEIGRVSTLGLNDDGGIVIRA
EFLERNAKWLRETSTFTLDKPLVGGAKIRVDSPDLDAPTLADGSTVLLLSSDVSKEIPALVERVKAILANVEHLTRKDGE
VNATLANVEKLTGRMTGEYGMLEGLLGSAEKARAVTDSLDKTRALITKLDGIALKTDRWLFAPDGVAEETRASLAQVRLM
LNDAQASLKKADAVMANAVDISADVKQGTQDIAALRSEIDDAVRKANALVNEINKKWPFARDPEVKLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33134; Mature: 33134

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLHFKVGLFAATSLFLAAVFVVYLLHARGFFEDIFELRLAAASADGVAPGVPVVFSGI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
EIGRVSTLGLNDDGGIVIRAEFLERNAKWLRETSTFTLDKPLVGGAKIRVDSPDLDAPTL
EECCEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCC
ADGSTVLLLSSDVSKEIPALVERVKAILANVEHLTRKDGEVNATLANVEKLTGRMTGEYG
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
MLEGLLGSAEKARAVTDSLDKTRALITKLDGIALKTDRWLFAPDGVAEETRASLAQVRLM
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCHHHHHHHHHHHHHH
LNDAQASLKKADAVMANAVDISADVKQGTQDIAALRSEIDDAVRKANALVNEINKKWPFA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RDPEVKLP
CCCCCCCC
>Mature Secondary Structure
MNKLHFKVGLFAATSLFLAAVFVVYLLHARGFFEDIFELRLAAASADGVAPGVPVVFSGI
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
EIGRVSTLGLNDDGGIVIRAEFLERNAKWLRETSTFTLDKPLVGGAKIRVDSPDLDAPTL
EECCEEEECCCCCCCEEEEHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCCCC
ADGSTVLLLSSDVSKEIPALVERVKAILANVEHLTRKDGEVNATLANVEKLTGRMTGEYG
CCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHH
MLEGLLGSAEKARAVTDSLDKTRALITKLDGIALKTDRWLFAPDGVAEETRASLAQVRLM
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEECCCCCHHHHHHHHHHHHHH
LNDAQASLKKADAVMANAVDISADVKQGTQDIAALRSEIDDAVRKANALVNEINKKWPFA
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RDPEVKLP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA