| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316994
Identifier: 74316994
GI number: 74316994
Start: 1040896
End: 1041405
Strand: Reverse
Name: 74316994
Synonym: Tbd_0976
Alternate gene names: NA
Gene position: 1041405-1040896 (Counterclockwise)
Preceding gene: 74316995
Following gene: 74316992
Centisome position: 35.79
GC content: 63.14
Gene sequence:
>510_bases ATGAAATACGCATCCGTCGCACTGGCCCTTGTGGCCGCATTCGCAAGCGCCGCGCAGGCCGCACCCGCAATGATGTCCGC GGAGTGGACCGCACAGGCTTGCGACGCCTGGAACAAGGACGCGGCACTCACCAACGGTCTGGCCGAAAAATGGGTCAAGA ACGACAAGGGCCGCGGCTACAAGATCATCCACCTCTACCGCACCGACTGCGGCGAGCCGACGCAGACCGAAATGAAGATC TCGGCCAAGGACGGCAAGGCGATGTGCGTCTACGGCGGCGCCGTGCAGAACCCGAAAATGGATCACGCCGTCGACTACAC GATGCATGCGACGACCGACCGCTGGGACGAAATGGGCGCTGGCGAATACGGCCCCATGAAGGCCATGATGTTCGGCCGCC TGAAGTTCGCCGGACCGAAGATGGAGGCGATGAGCGTGATGGGCCCGTTCGAAGCCTTCCTGCGTCTGCCCGGGAAAATC CCCGGCGACAAAGCCTGCCCGGCCAAGTAA
Upstream 100 bases:
>100_bases TTACCGTGCAGCCTCGGAGAATGCGGTTCTTCAGCAGTAACAACAAGCTGTATCCGAGTCGGGCTGCAAGCCAAATATTC AATAAAAGGAGGAGGTACCC
Downstream 100 bases:
>100_bases AAACGCGCGGCTGAAACGGAAAGCCGGGAGAAATCCCGGCTTTCTTGCGTCAGGACCTGCCGAAAGGATCGGGCCTAATG GACGGTTCCGCCCGCGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MKYASVALALVAAFASAAQAAPAMMSAEWTAQACDAWNKDAALTNGLAEKWVKNDKGRGYKIIHLYRTDCGEPTQTEMKI SAKDGKAMCVYGGAVQNPKMDHAVDYTMHATTDRWDEMGAGEYGPMKAMMFGRLKFAGPKMEAMSVMGPFEAFLRLPGKI PGDKACPAK
Sequences:
>Translated_169_residues MKYASVALALVAAFASAAQAAPAMMSAEWTAQACDAWNKDAALTNGLAEKWVKNDKGRGYKIIHLYRTDCGEPTQTEMKI SAKDGKAMCVYGGAVQNPKMDHAVDYTMHATTDRWDEMGAGEYGPMKAMMFGRLKFAGPKMEAMSVMGPFEAFLRLPGKI PGDKACPAK >Mature_169_residues MKYASVALALVAAFASAAQAAPAMMSAEWTAQACDAWNKDAALTNGLAEKWVKNDKGRGYKIIHLYRTDCGEPTQTEMKI SAKDGKAMCVYGGAVQNPKMDHAVDYTMHATTDRWDEMGAGEYGPMKAMMFGRLKFAGPKMEAMSVMGPFEAFLRLPGKI PGDKACPAK
Specific function: Unknown
COG id: COG3255
COG function: function code I; Putative sterol carrier protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18281; Mature: 18281
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 10.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 10.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYASVALALVAAFASAAQAAPAMMSAEWTAQACDAWNKDAALTNGLAEKWVKNDKGRGY CCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCE KIIHLYRTDCGEPTQTEMKISAKDGKAMCVYGGAVQNPKMDHAVDYTMHATTDRWDEMGA EEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCC GEYGPMKAMMFGRLKFAGPKMEAMSVMGPFEAFLRLPGKIPGDKACPAK CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKYASVALALVAAFASAAQAAPAMMSAEWTAQACDAWNKDAALTNGLAEKWVKNDKGRGY CCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCE KIIHLYRTDCGEPTQTEMKISAKDGKAMCVYGGAVQNPKMDHAVDYTMHATTDRWDEMGA EEEEEEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCC GEYGPMKAMMFGRLKFAGPKMEAMSVMGPFEAFLRLPGKIPGDKACPAK CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA