| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is thrC [H]
Identifier: 74316862
GI number: 74316862
Start: 893626
End: 895068
Strand: Direct
Name: thrC [H]
Synonym: Tbd_0844
Alternate gene names: 74316862
Gene position: 893626-895068 (Clockwise)
Preceding gene: 74316861
Following gene: 74316863
Centisome position: 30.71
GC content: 65.21
Gene sequence:
>1443_bases ATGAACTACCTCAGCACGCGGGGCCTCGCGCCGCAACTCCGCTTTTCCGACATCCTGCTCGGCGGGCTGGCCGACGACGG CGGCCTCTACGTGCCCGAGGCGTACCCGCGTTTCACGGCGGCCGAGCTCGAGGCGATGCGGGCGATGAACTACCGCGAAC TCGCGTTCGCGGTGCTGTCGCGACTCGTCGACGACATTCCGGCGGACGACCTGCGCGCGCTGATCGACAAGACCTATACC GCCGACGTCTACCGCTATGTCGGCCGCGGCGAGAATGCTGCCGACATCACGCCGCTCAAGACGCTGGAGCCCGGTCTGCA CGTGCTCGCGCTGTCGAACGGCCCGACGCTCGCGTTCAAGGACATGGCGATGCAGCTCCTCGGCAACCTGTTCGAGTACG TGCTCGGCAAGACCGGGGGCGAACTCAACATCGTCGGCGCGACCTCGGGCGACACGGGTTCGGCGGCCGAATACGCCATG CGCGGCAAGAAGGGCGTGCGCGTCTTCATGCTGTCGCCGGAGCATGGCATGACGCGCTTCCAGCAGGCGCAGATGTACGC GCTGCGCGACGACAACATCCACAACCTCGTGATTCGCGGCGTCTTCGACCAATGCCAGGACATGGTCAAGGCCGTGGCGA ACGACCTGCCGTTCAAGGCGAAATACCATATCGGCGCGGTCAACTCGATCAACTGGGCGCGCGTCGCGGCGCAGAGCGTC TACTACTTCAAGGCGTATTTCGCGGCGACCCACAGCAACACGCAAAGCGTTTCGTTCTCGGTGCCGTCGGGCAATTTCGG CAACGTCTATGCCGGGCACGTCGCGCGCCAGATGGGCCTGCCGATCAACAAGCTGATCGTCGCGACCAACGAGAACGACG TGCTCGACGAATTCTTCAAGACCGGCGTCTACCGTCCGCGCCCGGAGACAAAACACACGTCGAGCCCCTCGATGGATATT TCCAAGGCATCGAATTTCGAACGCTTCGTCTTCGACCTGAGCGGCCGCGACGTCGCGAAGGTGCGCGACCTCTGGCGCGC GGTCGAGTCGGGCGGCAGCTTCGATCTCAAGACCCACGCCGCGCCGGGCGGCGGCAGCTTGTTCGAGCGCATCGCCGATT TCGGCATGGTCTCGGGTTCGAGCAACCATGCCAACCGCATCGACACGATCCGTACGGTCTACGAGGTCTACGGCACGATG ATCGATCCACACACGGCCGACGGCCTCAAGGTCGGGCTCGAGCACCGCGAGCCGGGCGTGCCGCTCGTGTGCATGGAAAC GGCGCAGCCCGCCAAGTTCGAGGACGCGATTCGCGAAGCGCTCGGCATCGACCCGGTCCGTCCGGCCGAGCTCGCCGACC TCGAAACCCAGCCGCAGAAGAAGCACGTCATGGACGCCGACGTCGATGCGGTCAAGCGCTTCCTCGTCGAACACGCCGGC TGA
Upstream 100 bases:
>100_bases CGCTCGAGAAGAACGTCAACGCCGCGATCGCGAAGATCGAAGCGCTCGACGCCGTGGCGGGCAAGGTCATGCGCATCCGA CTCGAGGACCTGGGCGCCAA
Downstream 100 bases:
>100_bases GCCGCACGGCACGGGCACGGTGCCGCGCGGGCAGTCTGCCGCCGGCGGCGCCTTCGCCGACCTGCTCGCGCGCGTCGCCG CCTGCACCGCCTGCGCCGAA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MNYLSTRGLAPQLRFSDILLGGLADDGGLYVPEAYPRFTAAELEAMRAMNYRELAFAVLSRLVDDIPADDLRALIDKTYT ADVYRYVGRGENAADITPLKTLEPGLHVLALSNGPTLAFKDMAMQLLGNLFEYVLGKTGGELNIVGATSGDTGSAAEYAM RGKKGVRVFMLSPEHGMTRFQQAQMYALRDDNIHNLVIRGVFDQCQDMVKAVANDLPFKAKYHIGAVNSINWARVAAQSV YYFKAYFAATHSNTQSVSFSVPSGNFGNVYAGHVARQMGLPINKLIVATNENDVLDEFFKTGVYRPRPETKHTSSPSMDI SKASNFERFVFDLSGRDVAKVRDLWRAVESGGSFDLKTHAAPGGGSLFERIADFGMVSGSSNHANRIDTIRTVYEVYGTM IDPHTADGLKVGLEHREPGVPLVCMETAQPAKFEDAIREALGIDPVRPAELADLETQPQKKHVMDADVDAVKRFLVEHAG
Sequences:
>Translated_480_residues MNYLSTRGLAPQLRFSDILLGGLADDGGLYVPEAYPRFTAAELEAMRAMNYRELAFAVLSRLVDDIPADDLRALIDKTYT ADVYRYVGRGENAADITPLKTLEPGLHVLALSNGPTLAFKDMAMQLLGNLFEYVLGKTGGELNIVGATSGDTGSAAEYAM RGKKGVRVFMLSPEHGMTRFQQAQMYALRDDNIHNLVIRGVFDQCQDMVKAVANDLPFKAKYHIGAVNSINWARVAAQSV YYFKAYFAATHSNTQSVSFSVPSGNFGNVYAGHVARQMGLPINKLIVATNENDVLDEFFKTGVYRPRPETKHTSSPSMDI SKASNFERFVFDLSGRDVAKVRDLWRAVESGGSFDLKTHAAPGGGSLFERIADFGMVSGSSNHANRIDTIRTVYEVYGTM IDPHTADGLKVGLEHREPGVPLVCMETAQPAKFEDAIREALGIDPVRPAELADLETQPQKKHVMDADVDAVKRFLVEHAG >Mature_480_residues MNYLSTRGLAPQLRFSDILLGGLADDGGLYVPEAYPRFTAAELEAMRAMNYRELAFAVLSRLVDDIPADDLRALIDKTYT ADVYRYVGRGENAADITPLKTLEPGLHVLALSNGPTLAFKDMAMQLLGNLFEYVLGKTGGELNIVGATSGDTGSAAEYAM RGKKGVRVFMLSPEHGMTRFQQAQMYALRDDNIHNLVIRGVFDQCQDMVKAVANDLPFKAKYHIGAVNSINWARVAAQSV YYFKAYFAATHSNTQSVSFSVPSGNFGNVYAGHVARQMGLPINKLIVATNENDVLDEFFKTGVYRPRPETKHTSSPSMDI SKASNFERFVFDLSGRDVAKVRDLWRAVESGGSFDLKTHAAPGGGSLFERIADFGMVSGSSNHANRIDTIRTVYEVYGTM IDPHTADGLKVGLEHREPGVPLVCMETAQPAKFEDAIREALGIDPVRPAELADLETQPQKKHVMDADVDAVKRFLVEHAG
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI149193323, Length=473, Percent_Identity=31.2896405919662, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI153792148, Length=482, Percent_Identity=31.7427385892116, Blast_Score=221, Evalue=1e-57, Organism=Escherichia coli, GI1786185, Length=468, Percent_Identity=28.4188034188034, Blast_Score=189, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319901, Length=476, Percent_Identity=39.4957983193277, Blast_Score=324, Evalue=2e-89,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 52643; Mature: 52643
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLSTRGLAPQLRFSDILLGGLADDGGLYVPEAYPRFTAAELEAMRAMNYRELAFAVLS CCCCCCCCCCCCCCHHHEEEECCCCCCCEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH RLVDDIPADDLRALIDKTYTADVYRYVGRGENAADITPLKTLEPGLHVLALSNGPTLAFK HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCCCCHHH DMAMQLLGNLFEYVLGKTGGELNIVGATSGDTGSAAEYAMRGKKGVRVFMLSPEHGMTRF HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHH QQAQMYALRDDNIHNLVIRGVFDQCQDMVKAVANDLPFKAKYHIGAVNSINWARVAAQSV HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH YYFKAYFAATHSNTQSVSFSVPSGNFGNVYAGHVARQMGLPINKLIVATNENDVLDEFFK HHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHEEEEECCCHHHHHHHH TGVYRPRPETKHTSSPSMDISKASNFERFVFDLSGRDVAKVRDLWRAVESGGSFDLKTHA CCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC APGGGSLFERIADFGMVSGSSNHANRIDTIRTVYEVYGTMIDPHTADGLKVGLEHREPGV CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCC PLVCMETAQPAKFEDAIREALGIDPVRPAELADLETQPQKKHVMDADVDAVKRFLVEHAG CEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNYLSTRGLAPQLRFSDILLGGLADDGGLYVPEAYPRFTAAELEAMRAMNYRELAFAVLS CCCCCCCCCCCCCCHHHEEEECCCCCCCEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHH RLVDDIPADDLRALIDKTYTADVYRYVGRGENAADITPLKTLEPGLHVLALSNGPTLAFK HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCCCCHHH DMAMQLLGNLFEYVLGKTGGELNIVGATSGDTGSAAEYAMRGKKGVRVFMLSPEHGMTRF HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHH QQAQMYALRDDNIHNLVIRGVFDQCQDMVKAVANDLPFKAKYHIGAVNSINWARVAAQSV HHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH YYFKAYFAATHSNTQSVSFSVPSGNFGNVYAGHVARQMGLPINKLIVATNENDVLDEFFK HHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCHHHEEEEECCCHHHHHHHH TGVYRPRPETKHTSSPSMDISKASNFERFVFDLSGRDVAKVRDLWRAVESGGSFDLKTHA CCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECC APGGGSLFERIADFGMVSGSSNHANRIDTIRTVYEVYGTMIDPHTADGLKVGLEHREPGV CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCC PLVCMETAQPAKFEDAIREALGIDPVRPAELADLETQPQKKHVMDADVDAVKRFLVEHAG CEEEECCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8117070 [H]