Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74316849

Identifier: 74316849

GI number: 74316849

Start: 876540

End: 878978

Strand: Direct

Name: 74316849

Synonym: Tbd_0831

Alternate gene names: NA

Gene position: 876540-878978 (Clockwise)

Preceding gene: 74316843

Following gene: 74316850

Centisome position: 30.12

GC content: 65.76

Gene sequence:

>2439_bases
ATGTATTCCTTTGAACCATATACCGGGCGTCCAATCAGACTTGATCTGCTCGTGCACAAAGGGGAGACCAGCATGGACGC
GCCGACACCCGCCACGGCCCTGACATCGGTGGAACTCGAACAGCTGGACGCCTACTGGCGCGCGGCCAATTACCTCTCGG
TCGGGCAGATTTATCTGTTCGACAATCCGCTGCTCAAACAGCCGCTTGACCGCGCCCACATCAAGCCGCGCCTGCTCGGC
CACTGGGGAACGACGCCGGGCCTGAACTTCATCTATGCCCACATGAACCGCGCGATCCGCGCCCACGATCTCGACATGAT
CTTCATCACGGGCCCCGGACACGGCGGCCCGGCTGTCGTCGCGAACACCTATCTCGAAGGCAGCTACAGCGAGCTCTATC
CCAACATCACCCGCGACGAGGCCGGCCTGCGCCAGCTGTTCCGCCAGTTTTCCTTCCCCGGCGGCATCCCGAGCCACGCG
GCGCCCGAGACGCCGGGCTCGATCAACGAAGGCGGCGAGCTCGGCTATTCGCTGCTGCACGCCTACGGCGCCGTGTTTGA
CAATCCCGACCTGATCGCCTGCTGCGTGATCGGCGATGGGGAGGCCGAAACCGGCGCGCTCGCGACGTCGTGGCATTCCA
ACAAGTTTCTCGACCCGCGCGGCGACGGCGCGGTGCTGCCGGTCCTGCATCTGAACGGCTACAAGATCGCGAATCCCGCG
TTCCTCGCGCGCATCCCGCGCCACGAACTCGAAAGCCTGCTGACGGGCTACGGCTACCGGCCGATTTTCGTCGAGGGCGA
CGAGCCAAGCGACATGCATCAGAAGATGGCCGCTGCGGTCGACCAGGCGCTTGCCGAGATTCGCGGTATCCAGCGCCGGG
CGCGCGACGGCGGGGAGACCACGCGTCCGACATGGCCGATGATCGTGCTCGACTCGCCCAAGGGCTGGACCGGACCGAAG
GAAGTCGACGGCAAGAAGACCGAGGACTACTGGCGTTCGCACCAGGTGCCGTTCGGCGACCTCGACAATCCCGCGCACGT
GCGCCTGCTCGATGACTGGATGCGCAGCTACCGTCCCGAAGAACTGTTCGACGCCGGCGGCGCGTTAAAGCCCGAGCTCG
CCGCGCTCGCACCGACGGGCGAGCGGCGCATGGGCGCCAACCCGCACGCCAACGGCGGCAAGCTCCTGCGCGACCTGCGG
CTGCCGGATTTCCGCGACTACCGGGTCGAGCTGGACGCGCCCGGCAGCGTCGTCAGCGAGACGACGCGCACGCTCGGCGC
CTATCTGCGCGACGTCGTGCGCGACAATCCCGACAATTTCCGTCTCTTCGGTCCCGACGAGACGCATTCGAACCGGCTTT
CGGCGGTCTTCGAGGTCACCGACCGCACCTGGGTCGCCGAACGCTACCCCTACGACGACCATCTCGCGGCCGACGGCCGG
GTCATGGAGATCCTCTCGGAACACGCCTGCGAAGGCTGGCTCGAGGGCTATCTGCTGAGCGGGCGCCACGGCCTCTTCTC
GTGCTACGAGGCCTTCATCCACATCATCGGGTCGATGTTCAACCAGCACGCCAAATGGCTCAAGGTCTGTAACGAGATTC
CGTGGCGCGTGCCGGTTGCCTCGCTCAACATCCTGCTCACCTCGCACGTCTGGCGCCAGGACCACAACGGCTTCTCGCAC
CAGGACCCGGGCTTCATCGACCACGTCGTCAACAAGAAGGCCGACGTCATCCGCGTCTATCTGCCGCCCGACGCCAACAC
GCTGCTCGTCGTCGCCGACAAGTGCCTGAGGAGCCGCAATCTCGTCAACGTCATCGTCGCCGGCAAGCAGCCCGAGCAGC
AGTGGCTCGACATGGACGCCGCGGTCACTCACGCTGGCGTCGGCGTCGGCATCTGGGACTGGGCGTGCAACGACCAGGGC
GGCGAGCCCGACATCGTGCTCGCGGCCGCGGGCGACGTGCCGACCATGGAAATGCTCGCCGCGATCGACCTCCTGCGCAC
GCTCGTCCCCGACCTCAAAATTCGCTTCATCAACGTCGTCGACCTGATGACGCTGCAGCCTGCAGAGGAGCACCCGCACG
GCCTGCCGGACGAGGAATTCGACCTTCTGTTCACGACCGACAAGCCCATCCTCTTCGGCTATCACGGCTATCCGTGGCTG
ATCCATCGCCTCACCTACCGCCGCACCAACCACGACAACCTGCACGTGCGCGGCTACAAGGAGGAGGGCACGACGACGAC
GCCCTTCGACATGGTCGTGCTGAACGAGCTGGATCGCTTCCATCTCGTCATCGACGTCGCGCGCCGCGTGCCGAAGCTGC
AGGCCCAGGCGGCGCACCTGCAGCAGCAGATGCTCGACAAGCTCGGCGCGCACACGCAATACATCCACGCCCACGGCGAG
GACATGCCCGAGATCCGGGACTGGAAATGGGCGCGCTAA

Upstream 100 bases:

>100_bases
CTGTTGATTTATACAGTATTCTGGGCGCGATTCCAAGCCGCAAAAAATCCTGCGCGACGGCGCGAACTCGCTCGCGCCGC
GTCCACGGCGGGGCGCCGCC

Downstream 100 bases:

>100_bases
CCCGCAGCGTACTGACGCTCAACAGCGGCTCGTCGAGCCTCAAGGTGAGTCTGTTCCGCGCCGACGGCACGCGCAGCAAC
TGGCATTACCGCGCGCGCAG

Product: putative phosphoketolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MYSFEPYTGRPIRLDLLVHKGETSMDAPTPATALTSVELEQLDAYWRAANYLSVGQIYLFDNPLLKQPLDRAHIKPRLLG
HWGTTPGLNFIYAHMNRAIRAHDLDMIFITGPGHGGPAVVANTYLEGSYSELYPNITRDEAGLRQLFRQFSFPGGIPSHA
APETPGSINEGGELGYSLLHAYGAVFDNPDLIACCVIGDGEAETGALATSWHSNKFLDPRGDGAVLPVLHLNGYKIANPA
FLARIPRHELESLLTGYGYRPIFVEGDEPSDMHQKMAAAVDQALAEIRGIQRRARDGGETTRPTWPMIVLDSPKGWTGPK
EVDGKKTEDYWRSHQVPFGDLDNPAHVRLLDDWMRSYRPEELFDAGGALKPELAALAPTGERRMGANPHANGGKLLRDLR
LPDFRDYRVELDAPGSVVSETTRTLGAYLRDVVRDNPDNFRLFGPDETHSNRLSAVFEVTDRTWVAERYPYDDHLAADGR
VMEILSEHACEGWLEGYLLSGRHGLFSCYEAFIHIIGSMFNQHAKWLKVCNEIPWRVPVASLNILLTSHVWRQDHNGFSH
QDPGFIDHVVNKKADVIRVYLPPDANTLLVVADKCLRSRNLVNVIVAGKQPEQQWLDMDAAVTHAGVGVGIWDWACNDQG
GEPDIVLAAAGDVPTMEMLAAIDLLRTLVPDLKIRFINVVDLMTLQPAEEHPHGLPDEEFDLLFTTDKPILFGYHGYPWL
IHRLTYRRTNHDNLHVRGYKEEGTTTTPFDMVVLNELDRFHLVIDVARRVPKLQAQAAHLQQQMLDKLGAHTQYIHAHGE
DMPEIRDWKWAR

Sequences:

>Translated_812_residues
MYSFEPYTGRPIRLDLLVHKGETSMDAPTPATALTSVELEQLDAYWRAANYLSVGQIYLFDNPLLKQPLDRAHIKPRLLG
HWGTTPGLNFIYAHMNRAIRAHDLDMIFITGPGHGGPAVVANTYLEGSYSELYPNITRDEAGLRQLFRQFSFPGGIPSHA
APETPGSINEGGELGYSLLHAYGAVFDNPDLIACCVIGDGEAETGALATSWHSNKFLDPRGDGAVLPVLHLNGYKIANPA
FLARIPRHELESLLTGYGYRPIFVEGDEPSDMHQKMAAAVDQALAEIRGIQRRARDGGETTRPTWPMIVLDSPKGWTGPK
EVDGKKTEDYWRSHQVPFGDLDNPAHVRLLDDWMRSYRPEELFDAGGALKPELAALAPTGERRMGANPHANGGKLLRDLR
LPDFRDYRVELDAPGSVVSETTRTLGAYLRDVVRDNPDNFRLFGPDETHSNRLSAVFEVTDRTWVAERYPYDDHLAADGR
VMEILSEHACEGWLEGYLLSGRHGLFSCYEAFIHIIGSMFNQHAKWLKVCNEIPWRVPVASLNILLTSHVWRQDHNGFSH
QDPGFIDHVVNKKADVIRVYLPPDANTLLVVADKCLRSRNLVNVIVAGKQPEQQWLDMDAAVTHAGVGVGIWDWACNDQG
GEPDIVLAAAGDVPTMEMLAAIDLLRTLVPDLKIRFINVVDLMTLQPAEEHPHGLPDEEFDLLFTTDKPILFGYHGYPWL
IHRLTYRRTNHDNLHVRGYKEEGTTTTPFDMVVLNELDRFHLVIDVARRVPKLQAQAAHLQQQMLDKLGAHTQYIHAHGE
DMPEIRDWKWAR
>Mature_812_residues
MYSFEPYTGRPIRLDLLVHKGETSMDAPTPATALTSVELEQLDAYWRAANYLSVGQIYLFDNPLLKQPLDRAHIKPRLLG
HWGTTPGLNFIYAHMNRAIRAHDLDMIFITGPGHGGPAVVANTYLEGSYSELYPNITRDEAGLRQLFRQFSFPGGIPSHA
APETPGSINEGGELGYSLLHAYGAVFDNPDLIACCVIGDGEAETGALATSWHSNKFLDPRGDGAVLPVLHLNGYKIANPA
FLARIPRHELESLLTGYGYRPIFVEGDEPSDMHQKMAAAVDQALAEIRGIQRRARDGGETTRPTWPMIVLDSPKGWTGPK
EVDGKKTEDYWRSHQVPFGDLDNPAHVRLLDDWMRSYRPEELFDAGGALKPELAALAPTGERRMGANPHANGGKLLRDLR
LPDFRDYRVELDAPGSVVSETTRTLGAYLRDVVRDNPDNFRLFGPDETHSNRLSAVFEVTDRTWVAERYPYDDHLAADGR
VMEILSEHACEGWLEGYLLSGRHGLFSCYEAFIHIIGSMFNQHAKWLKVCNEIPWRVPVASLNILLTSHVWRQDHNGFSH
QDPGFIDHVVNKKADVIRVYLPPDANTLLVVADKCLRSRNLVNVIVAGKQPEQQWLDMDAAVTHAGVGVGIWDWACNDQG
GEPDIVLAAAGDVPTMEMLAAIDLLRTLVPDLKIRFINVVDLMTLQPAEEHPHGLPDEEFDLLFTTDKPILFGYHGYPWL
IHRLTYRRTNHDNLHVRGYKEEGTTTTPFDMVVLNELDRFHLVIDVARRVPKLQAQAAHLQQQMLDKLGAHTQYIHAHGE
DMPEIRDWKWAR

Specific function: Unknown

COG id: COG3957

COG function: function code G; Phosphoketolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the XFP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009014
- InterPro:   IPR005593
- InterPro:   IPR018969
- InterPro:   IPR019790
- InterPro:   IPR018970
- InterPro:   IPR019789 [H]

Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]

EC number: NA

Molecular weight: Translated: 91159; Mature: 91159

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSFEPYTGRPIRLDLLVHKGETSMDAPTPATALTSVELEQLDAYWRAANYLSVGQIYLF
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECEEEEE
DNPLLKQPLDRAHIKPRLLGHWGTTPGLNFIYAHMNRAIRAHDLDMIFITGPGHGGPAVV
CCHHHHCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEE
ANTYLEGSYSELYPNITRDEAGLRQLFRQFSFPGGIPSHAAPETPGSINEGGELGYSLLH
EEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AYGAVFDNPDLIACCVIGDGEAETGALATSWHSNKFLDPRGDGAVLPVLHLNGYKIANPA
HHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEECCCH
FLARIPRHELESLLTGYGYRPIFVEGDEPSDMHQKMAAAVDQALAEIRGIQRRARDGGET
HHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRPTWPMIVLDSPKGWTGPKEVDGKKTEDYWRSHQVPFGDLDNPAHVRLLDDWMRSYRPE
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHCCCH
ELFDAGGALKPELAALAPTGERRMGANPHANGGKLLRDLRLPDFRDYRVELDAPGSVVSE
HHHHCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHHH
TTRTLGAYLRDVVRDNPDNFRLFGPDETHSNRLSAVFEVTDRTWVAERYPYDDHLAADGR
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHEEEEEECCCEEEHHCCCCCCCCCCCCH
VMEILSEHACEGWLEGYLLSGRHGLFSCYEAFIHIIGSMFNQHAKWLKVCNEIPWRVPVA
HHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLVVADKCLRSRN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHCCCC
LVNVIVAGKQPEQQWLDMDAAVTHAGVGVGIWDWACNDQGGEPDIVLAAAGDVPTMEMLA
EEEEEEECCCCHHHHHCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHH
AIDLLRTLVPDLKIRFINVVDLMTLQPAEEHPHGLPDEEFDLLFTTDKPILFGYHGYPWL
HHHHHHHHCCCCEEEEEEEEHHEECCCHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHH
IHRLTYRRTNHDNLHVRGYKEEGTTTTPFDMVVLNELDRFHLVIDVARRVPKLQAQAAHL
HHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH
QQQMLDKLGAHTQYIHAHGEDMPEIRDWKWAR
HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MYSFEPYTGRPIRLDLLVHKGETSMDAPTPATALTSVELEQLDAYWRAANYLSVGQIYLF
CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECEEEEE
DNPLLKQPLDRAHIKPRLLGHWGTTPGLNFIYAHMNRAIRAHDLDMIFITGPGHGGPAVV
CCHHHHCCHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEE
ANTYLEGSYSELYPNITRDEAGLRQLFRQFSFPGGIPSHAAPETPGSINEGGELGYSLLH
EEEEECCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AYGAVFDNPDLIACCVIGDGEAETGALATSWHSNKFLDPRGDGAVLPVLHLNGYKIANPA
HHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEECCEEECCCH
FLARIPRHELESLLTGYGYRPIFVEGDEPSDMHQKMAAAVDQALAEIRGIQRRARDGGET
HHHHCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TRPTWPMIVLDSPKGWTGPKEVDGKKTEDYWRSHQVPFGDLDNPAHVRLLDDWMRSYRPE
CCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHCCCH
ELFDAGGALKPELAALAPTGERRMGANPHANGGKLLRDLRLPDFRDYRVELDAPGSVVSE
HHHHCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCCCHHHHH
TTRTLGAYLRDVVRDNPDNFRLFGPDETHSNRLSAVFEVTDRTWVAERYPYDDHLAADGR
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHEEEEEECCCEEEHHCCCCCCCCCCCCH
VMEILSEHACEGWLEGYLLSGRHGLFSCYEAFIHIIGSMFNQHAKWLKVCNEIPWRVPVA
HHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
SLNILLTSHVWRQDHNGFSHQDPGFIDHVVNKKADVIRVYLPPDANTLLVVADKCLRSRN
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHHCCCC
LVNVIVAGKQPEQQWLDMDAAVTHAGVGVGIWDWACNDQGGEPDIVLAAAGDVPTMEMLA
EEEEEEECCCCHHHHHCHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCCCHHHHHH
AIDLLRTLVPDLKIRFINVVDLMTLQPAEEHPHGLPDEEFDLLFTTDKPILFGYHGYPWL
HHHHHHHHCCCCEEEEEEEEHHEECCCHHHCCCCCCCCCCEEEEECCCCEEEECCCCHHH
IHRLTYRRTNHDNLHVRGYKEEGTTTTPFDMVVLNELDRFHLVIDVARRVPKLQAQAAHL
HHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHH
QQQMLDKLGAHTQYIHAHGEDMPEIRDWKWAR
HHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]