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The map label for this gene is skp [H]

Identifier: 74316812

GI number: 74316812

Start: 838055

End: 838558

Strand: Direct

Name: skp [H]

Synonym: Tbd_0794

Alternate gene names: 74316812

Gene position: 838055-838558 (Clockwise)

Preceding gene: 74316811

Following gene: 74316813

Centisome position: 28.8

GC content: 63.89

Gene sequence:

>504_bases
ATGATGAGCTTCAAGCAGTTCGCACTTTCCCTGATGCTGGCGACCGCGTTCGTCGCCATGCCCGCTGGCGCCGACACCAA
GATCGGTTTCGTCAACACCGAGCGCCTGTTGCGTGAAGCGCCGCTCTCGGTCGCGGCGCAGAAGAAACTCGAACGCGAGT
TCGCCGGTCGCGACCAGGAACTGCAAAAGCGCGCGAAGCAGGCGCGTGACCTGCAGGCGCAGCTCGACAAGGACGGCGTG
ACGATGTCCGACAGCGAGCGCAAGACCAAGGAGCGCGATCTGGCCAACCTGAACCGGGAACTGCAGCGCCAGGGCCGCGA
ATTCCGCGAGGATCTCAACCTGCGCCGCAACGAGGAACTGGGCCAGATCCAGGAGCGCGCGCGCAGGGCGATCCAGGAGA
TTGCCCGCACCGAGAAATACGACCTCATCGTCGAGCAGGCCGTCTACGTCGATGCCAAGAGCGACATCACCGACCGGGTG
ATGAAGGCGCTGGGCGGGAAATAA

Upstream 100 bases:

>100_bases
CCTCGCACAACCCCTCTCGAGCAAGGAAGACGACGAGGAAGAGATGTTCCAATTCACCTTGGGCAACGTGTTCTGAGACG
CGTTGGCTACCGGAGTAATC

Downstream 100 bases:

>100_bases
TCGGCGGCGATGGCGGTCACGCTTGCAGCGCTGGTCGAGCGCTTTGGCGGCGAGCTGGTCGGCGACAGCGCGCGTTCGGT
GCGCCAGGTCGCGCCGCTCG

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MMSFKQFALSLMLATAFVAMPAGADTKIGFVNTERLLREAPLSVAAQKKLEREFAGRDQELQKRAKQARDLQAQLDKDGV
TMSDSERKTKERDLANLNRELQRQGREFREDLNLRRNEELGQIQERARRAIQEIARTEKYDLIVEQAVYVDAKSDITDRV
MKALGGK

Sequences:

>Translated_167_residues
MMSFKQFALSLMLATAFVAMPAGADTKIGFVNTERLLREAPLSVAAQKKLEREFAGRDQELQKRAKQARDLQAQLDKDGV
TMSDSERKTKERDLANLNRELQRQGREFREDLNLRRNEELGQIQERARRAIQEIARTEKYDLIVEQAVYVDAKSDITDRV
MKALGGK
>Mature_167_residues
MMSFKQFALSLMLATAFVAMPAGADTKIGFVNTERLLREAPLSVAAQKKLEREFAGRDQELQKRAKQARDLQAQLDKDGV
TMSDSERKTKERDLANLNRELQRQGREFREDLNLRRNEELGQIQERARRAIQEIARTEKYDLIVEQAVYVDAKSDITDRV
MKALGGK

Specific function: Molecular chaperone that interacts specifically with outer membrane proteins, thus maintaining the solubility of early folding intermediates during passage through the periplasm [H]

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: 580 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 19143; Mature: 19143

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFKQFALSLMLATAFVAMPAGADTKIGFVNTERLLREAPLSVAAQKKLEREFAGRDQE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
LQKRAKQARDLQAQLDKDGVTMSDSERKTKERDLANLNRELQRQGREFREDLNLRRNEEL
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GQIQERARRAIQEIARTEKYDLIVEQAVYVDAKSDITDRVMKALGGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MMSFKQFALSLMLATAFVAMPAGADTKIGFVNTERLLREAPLSVAAQKKLEREFAGRDQE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCHH
LQKRAKQARDLQAQLDKDGVTMSDSERKTKERDLANLNRELQRQGREFREDLNLRRNEEL
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
GQIQERARRAIQEIARTEKYDLIVEQAVYVDAKSDITDRVMKALGGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA