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The map label for this gene is omp85 [H]

Identifier: 74316811

GI number: 74316811

Start: 835718

End: 838030

Strand: Direct

Name: omp85 [H]

Synonym: Tbd_0793

Alternate gene names: 74316811

Gene position: 835718-838030 (Clockwise)

Preceding gene: 74316810

Following gene: 74316812

Centisome position: 28.72

GC content: 63.21

Gene sequence:

>2313_bases
ATGAAAAAACCCATGACCCTGACCCGTCTGACGCTGGCCCTCGCTGCGGTATTCGTCACGCATGCCGCATCCGCCGAGGC
GCCTTTCGTCGTCAAGGACATCCGCGTCGAGGGTATCCAGCGCACCGAGGCCGGCACGGTTTTCAGCTATCTGCCGGTCA
AGGTCGGCGATACGATGACCGACGAGAAGACCGCTGCCGCGATCAAGGCCTTGTACGCGACCGGGTTCTTCAAGGACGTC
AGGCTCGAGGCGCGCGACGGCGTCGTGATCGTGACCGTGCAGGAGCGGCCGTCGATCGCCAAGATCACCTTGTCCGGCAT
CAAGGAATTCTCCGAGGACGATCTCAAGGCCGGGCTCAAGCAGACCGGCCTTGCCGAAGGGCGCGTGCTGGATCGATCGC
TGGTCGAGAAGGCCGAGCAGGAACTGCAGCGCCAGTACTTCAACCGCGGCAAGTACGCGGTCGAGATCAAGTCGACGCTG
ACGCCGCTCGAGCGCAACCGCGTCGCCGTGCAGTTCGACGTCGTCGAAGGCGACAGCGCGAAGATCCGCCAAATCAACAT
CGTCGGCAACAAGGCGTTCAAGGAGAAGGAGCTGCTCAACCAGCTCACCTCGACGACGCCCAACTGGCTGACCTGGTACA
CCAAGAACGATCAGTATTCGAAGACGCGTCTTGCGGGCGACCTCGAGGCGCTGCGCTCGTTCTATCTCAACCGCGGCTAC
CTCGAATTCAACGTCGACTCGACCCAGGTGTCGATCTCGCCCGACAAGCAGGGTATCTACATCACGGTCAACGTCACCGA
GGGGCCGCAGTACCGCGTCTCGGACGTCAAGCTCGCCGGACAGATGCTGGTACCCGAAGCCGAGCTCAGGAAGCTCATCA
CGCTCGAGCCGGGCGAAGTGTTCGAGCGCGACCGCCTGACCGAGTCGACGAAGAAGATCGGCGACCGCCTCGGCAACGAC
GGCTACGCCTTTGCCAACGTCAACGCCGTGCCCGAGCTCGACAAGGAGAAGAGCACCGTCGCGTTCACGCTTTTCGTGGA
TCCGGGCCGGCGCGTCTACGTCAACCGCATCAACGTCGCCGGCAACACGCGCACGCGCGACGAGGTCGTGCGCCGCGAAA
TTCGCCAGATGGAAGGCGCCTATTACGACGCCGAGAAGATCAACCGCTCGCGTGACCGCCTCAACCGTCTCGGCTACTTC
AACGAGGTCAACATCGAGACCCCGAGCGTGGCGGGAACGACCGACCAGGTCGACGTCAACGTCAGCGTCGCCGAGAAGTC
GACCGGCAACATCATGCTCGGCGCCGGTTTCTCCTCGTCCGAAGGCCTCGTGCTGTCGGGCTCGGTCTCGCAAAGCAACG
TCTTCGGTACCGGCAACCGGCTCTCGGCACAGATCAACTCGGGGAGCGTCAATACGGTCTATTCGCTCTCGTACACCAAT
CCCTACTACACGATCGACGGCATCAGCCTCGGCTACGACATCTACCGGCGCGACGTCGACGCAAGCGAACTCGACGGCGT
CGGCGACTACGAGACGTCGACCTACGGCGCCGGCGTGCGCTTCGGCCTGCCGATCAATGAACGCGATTTCATTTCCTTCG
GCCTGACCTACGAGCAGACGTCGATCACGACCGATGCCGACAGCCCGACCAACTACCAGAAGTTCGAGGAGGAGTTCGGC
AGCGACAACGACACCGTGCGCGTCGACACCTCGTGGGCACGCGATACGCGCAATAGCCACCTGTTCCCGACCCGCGGTCT
GTTCCAGCGCGTGGCGGCCGAAGTCGGCACGCCGCTCGGCAGTCTCGAGTACTACAAGCTGTCGTTCCAGCACCAGCAAT
ACTTCCCGCTCAGCAAGCGCTTCACGCTCATGCTGAACGGCGAAGTCGGCGTCGGCGGCGGCCTGTCGGACAAGCCGCTG
CCGTTCTTCAAGAACTTCTACGCAGGCGGCACGAGTTCGGTGCGCGGCTTCGAGAACGGCACGCTCGGTCCGAAGGACGA
CGAGAACAACGCGCTCGGCGGCGACAAACGCGTCGTCGGCAACGCCGAGCTGTTCTTCCCGCTGCCCGGCCTCAAGGACG
ACCAGTCCCTGCGCATGTCGGCCTTCGTCGACGCGGGCGCGACCTTCGGCCCGAATGATGACCAGCACCGCTACGAGAAT
TTCGCCTTCGGTGACCTGCGCTATTCGGCGGGCGTCGCCGTGCTGTGGGTCTCACCGCTCGGCCCGCTCAAGTTCAGCCT
CGCACAACCCCTCTCGAGCAAGGAAGACGACGAGGAAGAGATGTTCCAATTCACCTTGGGCAACGTGTTCTGA

Upstream 100 bases:

>100_bases
CCGAGCGCGCCATGGAAATAGGGAGCCGGATCGGCATGGCGCTTCTGCTGTTGCTGATGTCGTTCGCCCTCTTCAACGAT
TTGCAACGTCTAATAAGCGG

Downstream 100 bases:

>100_bases
GACGCGTTGGCTACCGGAGTAATCATGATGAGCTTCAAGCAGTTCGCACTTTCCCTGATGCTGGCGACCGCGTTCGTCGC
CATGCCCGCTGGCGCCGACA

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 770; Mature: 770

Protein sequence:

>770_residues
MKKPMTLTRLTLALAAVFVTHAASAEAPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTMTDEKTAAAIKALYATGFFKDV
RLEARDGVVIVTVQERPSIAKITLSGIKEFSEDDLKAGLKQTGLAEGRVLDRSLVEKAEQELQRQYFNRGKYAVEIKSTL
TPLERNRVAVQFDVVEGDSAKIRQINIVGNKAFKEKELLNQLTSTTPNWLTWYTKNDQYSKTRLAGDLEALRSFYLNRGY
LEFNVDSTQVSISPDKQGIYITVNVTEGPQYRVSDVKLAGQMLVPEAELRKLITLEPGEVFERDRLTESTKKIGDRLGND
GYAFANVNAVPELDKEKSTVAFTLFVDPGRRVYVNRINVAGNTRTRDEVVRREIRQMEGAYYDAEKINRSRDRLNRLGYF
NEVNIETPSVAGTTDQVDVNVSVAEKSTGNIMLGAGFSSSEGLVLSGSVSQSNVFGTGNRLSAQINSGSVNTVYSLSYTN
PYYTIDGISLGYDIYRRDVDASELDGVGDYETSTYGAGVRFGLPINERDFISFGLTYEQTSITTDADSPTNYQKFEEEFG
SDNDTVRVDTSWARDTRNSHLFPTRGLFQRVAAEVGTPLGSLEYYKLSFQHQQYFPLSKRFTLMLNGEVGVGGGLSDKPL
PFFKNFYAGGTSSVRGFENGTLGPKDDENNALGGDKRVVGNAELFFPLPGLKDDQSLRMSAFVDAGATFGPNDDQHRYEN
FAFGDLRYSAGVAVLWVSPLGPLKFSLAQPLSSKEDDEEEMFQFTLGNVF

Sequences:

>Translated_770_residues
MKKPMTLTRLTLALAAVFVTHAASAEAPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTMTDEKTAAAIKALYATGFFKDV
RLEARDGVVIVTVQERPSIAKITLSGIKEFSEDDLKAGLKQTGLAEGRVLDRSLVEKAEQELQRQYFNRGKYAVEIKSTL
TPLERNRVAVQFDVVEGDSAKIRQINIVGNKAFKEKELLNQLTSTTPNWLTWYTKNDQYSKTRLAGDLEALRSFYLNRGY
LEFNVDSTQVSISPDKQGIYITVNVTEGPQYRVSDVKLAGQMLVPEAELRKLITLEPGEVFERDRLTESTKKIGDRLGND
GYAFANVNAVPELDKEKSTVAFTLFVDPGRRVYVNRINVAGNTRTRDEVVRREIRQMEGAYYDAEKINRSRDRLNRLGYF
NEVNIETPSVAGTTDQVDVNVSVAEKSTGNIMLGAGFSSSEGLVLSGSVSQSNVFGTGNRLSAQINSGSVNTVYSLSYTN
PYYTIDGISLGYDIYRRDVDASELDGVGDYETSTYGAGVRFGLPINERDFISFGLTYEQTSITTDADSPTNYQKFEEEFG
SDNDTVRVDTSWARDTRNSHLFPTRGLFQRVAAEVGTPLGSLEYYKLSFQHQQYFPLSKRFTLMLNGEVGVGGGLSDKPL
PFFKNFYAGGTSSVRGFENGTLGPKDDENNALGGDKRVVGNAELFFPLPGLKDDQSLRMSAFVDAGATFGPNDDQHRYEN
FAFGDLRYSAGVAVLWVSPLGPLKFSLAQPLSSKEDDEEEMFQFTLGNVF
>Mature_770_residues
MKKPMTLTRLTLALAAVFVTHAASAEAPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTMTDEKTAAAIKALYATGFFKDV
RLEARDGVVIVTVQERPSIAKITLSGIKEFSEDDLKAGLKQTGLAEGRVLDRSLVEKAEQELQRQYFNRGKYAVEIKSTL
TPLERNRVAVQFDVVEGDSAKIRQINIVGNKAFKEKELLNQLTSTTPNWLTWYTKNDQYSKTRLAGDLEALRSFYLNRGY
LEFNVDSTQVSISPDKQGIYITVNVTEGPQYRVSDVKLAGQMLVPEAELRKLITLEPGEVFERDRLTESTKKIGDRLGND
GYAFANVNAVPELDKEKSTVAFTLFVDPGRRVYVNRINVAGNTRTRDEVVRREIRQMEGAYYDAEKINRSRDRLNRLGYF
NEVNIETPSVAGTTDQVDVNVSVAEKSTGNIMLGAGFSSSEGLVLSGSVSQSNVFGTGNRLSAQINSGSVNTVYSLSYTN
PYYTIDGISLGYDIYRRDVDASELDGVGDYETSTYGAGVRFGLPINERDFISFGLTYEQTSITTDADSPTNYQKFEEEFG
SDNDTVRVDTSWARDTRNSHLFPTRGLFQRVAAEVGTPLGSLEYYKLSFQHQQYFPLSKRFTLMLNGEVGVGGGLSDKPL
PFFKNFYAGGTSSVRGFENGTLGPKDDENNALGGDKRVVGNAELFFPLPGLKDDQSLRMSAFVDAGATFGPNDDQHRYEN
FAFGDLRYSAGVAVLWVSPLGPLKFSLAQPLSSKEDDEEEMFQFTLGNVF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=815, Percent_Identity=37.9141104294479, Blast_Score=542, Evalue=1e-155,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85372; Mature: 85372

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPMTLTRLTLALAAVFVTHAASAEAPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTMT
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCEEEEEEEEECCCCC
DEKTAAAIKALYATGFFKDVRLEARDGVVIVTVQERPSIAKITLSGIKEFSEDDLKAGLK
CHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCEEEEEHHHHHHCCHHHHHHHHH
QTGLAEGRVLDRSLVEKAEQELQRQYFNRGKYAVEIKSTLTPLERNRVAVQFDVVEGDSA
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHCCEEEEEEEEEECCCC
KIRQINIVGNKAFKEKELLNQLTSTTPNWLTWYTKNDQYSKTRLAGDLEALRSFYLNRGY
EEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE
LEFNVDSTQVSISPDKQGIYITVNVTEGPQYRVSDVKLAGQMLVPEAELRKLITLEPGEV
EEEECCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCEEECCHHHHHHEEEECCHHH
FERDRLTESTKKIGDRLGNDGYAFANVNAVPELDKEKSTVAFTLFVDPGRRVYVNRINVA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEC
GNTRTRDEVVRREIRQMEGAYYDAEKINRSRDRLNRLGYFNEVNIETPSVAGTTDQVDVN
CCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEE
VSVAEKSTGNIMLGAGFSSSEGLVLSGSVSQSNVFGTGNRLSAQINSGSVNTVYSLSYTN
EEEECCCCCCEEEECCCCCCCCEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEECC
PYYTIDGISLGYDIYRRDVDASELDGVGDYETSTYGAGVRFGLPINERDFISFGLTYEQT
CEEEECCEEECHHHHHCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEECC
SITTDADSPTNYQKFEEEFGSDNDTVRVDTSWARDTRNSHLFPTRGLFQRVAAEVGTPLG
EEEECCCCCCCHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
SLEYYKLSFQHQQYFPLSKRFTLMLNGEVGVGGGLSDKPLPFFKNFYAGGTSSVRGFENG
CCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
TLGPKDDENNALGGDKRVVGNAELFFPLPGLKDDQSLRMSAFVDAGATFGPNDDQHRYEN
CCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHC
FAFGDLRYSAGVAVLWVSPLGPLKFSLAQPLSSKEDDEEEMFQFTLGNVF
EEEECEEECCCEEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKKPMTLTRLTLALAAVFVTHAASAEAPFVVKDIRVEGIQRTEAGTVFSYLPVKVGDTMT
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCEECCCCCEEEEEEEEECCCCC
DEKTAAAIKALYATGFFKDVRLEARDGVVIVTVQERPSIAKITLSGIKEFSEDDLKAGLK
CHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCEEEEEHHHHHHCCHHHHHHHHH
QTGLAEGRVLDRSLVEKAEQELQRQYFNRGKYAVEIKSTLTPLERNRVAVQFDVVEGDSA
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHCCEEEEEEEEEECCCC
KIRQINIVGNKAFKEKELLNQLTSTTPNWLTWYTKNDQYSKTRLAGDLEALRSFYLNRGY
EEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCE
LEFNVDSTQVSISPDKQGIYITVNVTEGPQYRVSDVKLAGQMLVPEAELRKLITLEPGEV
EEEECCCEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCEEECCHHHHHHEEEECCHHH
FERDRLTESTKKIGDRLGNDGYAFANVNAVPELDKEKSTVAFTLFVDPGRRVYVNRINVA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEC
GNTRTRDEVVRREIRQMEGAYYDAEKINRSRDRLNRLGYFNEVNIETPSVAGTTDQVDVN
CCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEE
VSVAEKSTGNIMLGAGFSSSEGLVLSGSVSQSNVFGTGNRLSAQINSGSVNTVYSLSYTN
EEEECCCCCCEEEECCCCCCCCEEEECCCCCCCEEECCCEEEEEECCCCCEEEEEEEECC
PYYTIDGISLGYDIYRRDVDASELDGVGDYETSTYGAGVRFGLPINERDFISFGLTYEQT
CEEEECCEEECHHHHHCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEEECC
SITTDADSPTNYQKFEEEFGSDNDTVRVDTSWARDTRNSHLFPTRGLFQRVAAEVGTPLG
EEEECCCCCCCHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
SLEYYKLSFQHQQYFPLSKRFTLMLNGEVGVGGGLSDKPLPFFKNFYAGGTSSVRGFENG
CCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
TLGPKDDENNALGGDKRVVGNAELFFPLPGLKDDQSLRMSAFVDAGATFGPNDDQHRYEN
CCCCCCCCCCCCCCCCEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHC
FAFGDLRYSAGVAVLWVSPLGPLKFSLAQPLSSKEDDEEEMFQFTLGNVF
EEEECEEECCCEEEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]