| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is bfr [H]
Identifier: 74316722
GI number: 74316722
Start: 744770
End: 745249
Strand: Reverse
Name: bfr [H]
Synonym: Tbd_0704
Alternate gene names: 74316722
Gene position: 745249-744770 (Counterclockwise)
Preceding gene: 74316723
Following gene: 74316721
Centisome position: 25.61
GC content: 58.33
Gene sequence:
>480_bases ATGAAAGGCGACAAGCAAGTTATCCAGTATCTGAACAAGGCGCTGACGGTCGAACTGACCGCCATCAACCAGTATTTTCT GCACGCGCGCATGTACAAGAACTGGGGCCTCAACGCACTCGGCAAGCATGAATACGAGGAGTCGATCGAGGAGATGAAAC ACGCCGACAAGCTGATCGAGCGCATCCTGTTCCTGGACGGCCTCCCCAACCTGCAGGACCTCAACAAGCTCATGATCGGC GAGAACGTCGTCGAATGCCTGAACTGCGACCTCAAGCTCGAGCTGACCGGCCGCGCGCTGTACGTCGAGGCGATCGCGCA CTGCGAATCGGTCAAGGATTACGTGTCGCGCGAAATCCTCGTCGGCATCCAGTCCGACACCGAGGAGCACATCGACTATC TCGAAACCCAGCTCGACCTTGTCAGCCGCATGGGCGAGCAGAACTACATGCAGACCGCCGCCGGCCCGATCGAAAGCTGA
Upstream 100 bases:
>100_bases CCAAGAATGGCGGAAACCCCGCTTCGCCCTCCAGCCACGTAGCCTATAACGCCATATAGCCAACGGCTATTCGGGGTGCT TTCAACCACAGGAGAGAAGA
Downstream 100 bases:
>100_bases GCCGCATCGCGCCTACAATCGATGCCCCCGCCGTGGGGCATTTTCAATTCGACCAATGGAATTCGACGCCAACTGCCGCG CCTGTCCGCGCCTCGCCACC
Product: bacterioferritin
Products: NA
Alternate protein names: BFR; Cytochrome b-557.5 [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKGDKQVIQYLNKALTVELTAINQYFLHARMYKNWGLNALGKHEYEESIEEMKHADKLIERILFLDGLPNLQDLNKLMIG ENVVECLNCDLKLELTGRALYVEAIAHCESVKDYVSREILVGIQSDTEEHIDYLETQLDLVSRMGEQNYMQTAAGPIES
Sequences:
>Translated_159_residues MKGDKQVIQYLNKALTVELTAINQYFLHARMYKNWGLNALGKHEYEESIEEMKHADKLIERILFLDGLPNLQDLNKLMIG ENVVECLNCDLKLELTGRALYVEAIAHCESVKDYVSREILVGIQSDTEEHIDYLETQLDLVSRMGEQNYMQTAAGPIES >Mature_159_residues MKGDKQVIQYLNKALTVELTAINQYFLHARMYKNWGLNALGKHEYEESIEEMKHADKLIERILFLDGLPNLQDLNKLMIG ENVVECLNCDLKLELTGRALYVEAIAHCESVKDYVSREILVGIQSDTEEHIDYLETQLDLVSRMGEQNYMQTAAGPIES
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=152, Percent_Identity=64.4736842105263, Blast_Score=194, Evalue=2e-51,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18235; Mature: 18235
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGDKQVIQYLNKALTVELTAINQYFLHARMYKNWGLNALGKHEYEESIEEMKHADKLIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RILFLDGLPNLQDLNKLMIGENVVECLNCDLKLELTGRALYVEAIAHCESVKDYVSREIL HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH VGIQSDTEEHIDYLETQLDLVSRMGEQNYMQTAAGPIES HCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCC >Mature Secondary Structure MKGDKQVIQYLNKALTVELTAINQYFLHARMYKNWGLNALGKHEYEESIEEMKHADKLIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH RILFLDGLPNLQDLNKLMIGENVVECLNCDLKLELTGRALYVEAIAHCESVKDYVSREIL HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHH VGIQSDTEEHIDYLETQLDLVSRMGEQNYMQTAAGPIES HCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1549605; 1904771 [H]