| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316721
Identifier: 74316721
GI number: 74316721
Start: 744091
End: 744714
Strand: Reverse
Name: 74316721
Synonym: Tbd_0703
Alternate gene names: NA
Gene position: 744714-744091 (Counterclockwise)
Preceding gene: 74316722
Following gene: 74316720
Centisome position: 25.59
GC content: 68.91
Gene sequence:
>624_bases ATGGAATTCGACGCCAACTGCCGCGCCTGTCCGCGCCTCGCCACCTTTCTCGACGAGGTACGCGGGCGCCACCCCGACTA TCACGCCCGCCCGGTGCCGCCGTTCGGCGACGCGGCGCCGCGTCTGCTGATCGTCGGCCTCGCACCCGGCATGCACGGTG CCAACCGCAGTGGACGCCCGTTCACCGGCGACCACGCGGGCATCCTGCTCTACGAGACGCTACACCGCTTCGGCTACGCG AGCGCACCCGCATCGCGCGCGCGCGACGACGGCCTGCAGTTGACAGGCTGCCGCATCACCAATGCAGTCAAATGCCTGCC GCCGGCGAACAAGCCCGAGCCGGGCGAGATACGCGCGTGCAACGGCTATCTCGCCGCCGAAATCGCCGGCCTGCCCGGGG GCGCGACGATCCTCGCCCTGGGGCAGATCGCGCATCAGGCGGTACTGCGGGCGCAGGGGCTCAAGCTCAAGGATTACCCT TTCACGCACGCCAGTGATTACGCCTTGCCCGGCGGCCTTCGGCTCGTCAGCAGCTACCACTGCTCCCGCTACAATACGCA GACCCGCCGCCTCACGCCCGAGATGTTCGCCGCGGTGTTCACCCAGATCCAACGCAAGGACTGA
Upstream 100 bases:
>100_bases GAGCAGAACTACATGCAGACCGCCGCCGGCCCGATCGAAAGCTGAGCCGCATCGCGCCTACAATCGATGCCCCCGCCGTG GGGCATTTTCAATTCGACCA
Downstream 100 bases:
>100_bases CCATGCCTGTCGTCACCATCAAGCTCGCCGGGACGCTGACGCGCGAGCAAAAGAAGAAGGTCGCCGAGGAAGTCACCGCG ACGCTCGAACGCCACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MEFDANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRPFTGDHAGILLYETLHRFGYA SAPASRARDDGLQLTGCRITNAVKCLPPANKPEPGEIRACNGYLAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYP FTHASDYALPGGLRLVSSYHCSRYNTQTRRLTPEMFAAVFTQIQRKD
Sequences:
>Translated_207_residues MEFDANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRPFTGDHAGILLYETLHRFGYA SAPASRARDDGLQLTGCRITNAVKCLPPANKPEPGEIRACNGYLAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYP FTHASDYALPGGLRLVSSYHCSRYNTQTRRLTPEMFAAVFTQIQRKD >Mature_207_residues MEFDANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRPFTGDHAGILLYETLHRFGYA SAPASRARDDGLQLTGCRITNAVKCLPPANKPEPGEIRACNGYLAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYP FTHASDYALPGGLRLVSSYHCSRYNTQTRRLTPEMFAAVFTQIQRKD
Specific function: Unknown
COG id: COG1573
COG function: function code L; Uracil-DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1259 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005122 [H]
Pfam domain/function: PF03167 UDG [H]
EC number: NA
Molecular weight: Translated: 22448; Mature: 22448
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC FTGDHAGILLYETLHRFGYASAPASRARDDGLQLTGCRITNAVKCLPPANKPEPGEIRAC CCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEEECEEECCEEEECCCCCCCCCCCEEEE NGYLAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYPFTHASDYALPGGLRLVSSYH CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH CSRYNTQTRRLTPEMFAAVFTQIQRKD HHHCCCHHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MEFDANCRACPRLATFLDEVRGRHPDYHARPVPPFGDAAPRLLIVGLAPGMHGANRSGRP CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC FTGDHAGILLYETLHRFGYASAPASRARDDGLQLTGCRITNAVKCLPPANKPEPGEIRAC CCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCEEECEEECCEEEECCCCCCCCCCCEEEE NGYLAAEIAGLPGGATILALGQIAHQAVLRAQGLKLKDYPFTHASDYALPGGLRLVSSYH CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH CSRYNTQTRRLTPEMFAAVFTQIQRKD HHHCCCHHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]