| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is bfd [C]
Identifier: 74316723
GI number: 74316723
Start: 745406
End: 745618
Strand: Reverse
Name: bfd [C]
Synonym: Tbd_0705
Alternate gene names: 74316723
Gene position: 745618-745406 (Counterclockwise)
Preceding gene: 74316724
Following gene: 74316722
Centisome position: 25.62
GC content: 66.67
Gene sequence:
>213_bases ATGTACGTCTGCCTGTGCCACGGCGTCACCGACACCGACATTCGCCGCCTCGTGCGCACCGAAGGTGTGTGCACGATGCG TGAACTGAGCCAGGAACTCGGCGTTGCGACCCAGTGCGGCAAGTGCGGTCGCTGCGCCAAGGAAGTGCTGTGCCAGGCCG TGGCCGACGTCCGCCAGGAAAACGCCTGCTGCGGCGCCTTGATGGCGGCCTGA
Upstream 100 bases:
>100_bases CTTACGAGCCGGCAAATGTTCGAATCAAACGATAAACCTATTGACAATCATTCTCATTTATTTAGAATGATCATCAATTG ATCCTGAGCGGAGAAATTCC
Downstream 100 bases:
>100_bases CCCGCGCATCCGGGCCGCCGGAACTCTTTCTTTGCTTGCCTGGTCCGTCGTTCTTCCCAAGAATGGCGGAAACCCCGCTT CGCCCTCCAGCCACGTAGCC
Product: bacterioferritin-associated ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MYVCLCHGVTDTDIRRLVRTEGVCTMRELSQELGVATQCGKCGRCAKEVLCQAVADVRQENACCGALMAA
Sequences:
>Translated_70_residues MYVCLCHGVTDTDIRRLVRTEGVCTMRELSQELGVATQCGKCGRCAKEVLCQAVADVRQENACCGALMAA >Mature_70_residues MYVCLCHGVTDTDIRRLVRTEGVCTMRELSQELGVATQCGKCGRCAKEVLCQAVADVRQENACCGALMAA
Specific function: Seems To Associate With Bfr; Could Be A General Redox And/Or Regulatory Component Participating In The Iron Storage Mobilization Functions Of Bfr. Could Participate In The Release Or The Delivery Of Iron From/To Bacterioferritin (Or Other Iron Complexes)
COG id: COG2906
COG function: function code P; Bacterioferritin-associated ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7540; Mature: 7540
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 17.1 %Cys+Met (Translated Protein) 12.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 17.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVCLCHGVTDTDIRRLVRTEGVCTMRELSQELGVATQCGKCGRCAKEVLCQAVADVRQE CEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHC NACCGALMAA CCHHHHHHCC >Mature Secondary Structure MYVCLCHGVTDTDIRRLVRTEGVCTMRELSQELGVATQCGKCGRCAKEVLCQAVADVRQE CEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHC NACCGALMAA CCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA