| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is 74316699
Identifier: 74316699
GI number: 74316699
Start: 721791
End: 722348
Strand: Reverse
Name: 74316699
Synonym: Tbd_0681
Alternate gene names: NA
Gene position: 722348-721791 (Counterclockwise)
Preceding gene: 74316700
Following gene: 74316692
Centisome position: 24.82
GC content: 67.38
Gene sequence:
>558_bases GTGTCTTTTTCGAACCTGCTGGCTGCCCTGCTCCTCCTCGCGGGCGTGAGCGGGTGCGCCACCCCCCGGTACCAGACGAC GTTTCGGCTGATCCCGCCGCCGGACGCAGCGGGCCGGGCCTGCGTCGAGCGCTGCGACGCGACGCAGGCAGCGTGCCAAA CGACGTGCAAGACGCGTTACGAGGCCTGTGCGAAGGCGGTCGCGCCGCAGGTGGAGGCGCGTTACGGCGAGGCGCTCGAG CAGTACGCGCTGGAGCTCAAGCGTTACGCTTCCGCCTTACGCCGCTACGAGATCCGGCTGCATTTCGACTGGATGCACAG CTATCCCTATCGCCACTATCCGCCGTACTGGTGGGATCCTTGGCCCGGCCCCTACTTCCCGCCCCCGTTCGCCGAGCCGG TGATGCCGACCCGCGAGAGCGTACGCGCCGAGCTGGAAAAGAAACAGTGCGAGGACGATTGCGGCTGCCTGCCCGCCTAC GATAGCTGCTTCCTCGGCTGCGGCGGGCAGCGCGTCAGCGAAACGGTGTGTGTCGAGAACTGTCCGTCCGCCAAATGA
Upstream 100 bases:
>100_bases AACCTGCAGGAACTCGAAGCCCGTTTCCTGAAGACGCCGCCCGAATAAAAACGGCCTATGCTGGGAGCAAAGCGAGCCGC GAACGGATGGAGCGATGCGC
Downstream 100 bases:
>100_bases GGGCTCAGCGCGGCGACATGAGCGCAGTCAGCTTCACCGCCACGCTCTCGGTCTCGCTGTTGAGCCAGATTTCGCCGTCC TGCACCATGCATTGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSFSNLLAALLLLAGVSGCATPRYQTTFRLIPPPDAAGRACVERCDATQAACQTTCKTRYEACAKAVAPQVEARYGEALE QYALELKRYASALRRYEIRLHFDWMHSYPYRHYPPYWWDPWPGPYFPPPFAEPVMPTRESVRAELEKKQCEDDCGCLPAY DSCFLGCGGQRVSETVCVENCPSAK
Sequences:
>Translated_185_residues MSFSNLLAALLLLAGVSGCATPRYQTTFRLIPPPDAAGRACVERCDATQAACQTTCKTRYEACAKAVAPQVEARYGEALE QYALELKRYASALRRYEIRLHFDWMHSYPYRHYPPYWWDPWPGPYFPPPFAEPVMPTRESVRAELEKKQCEDDCGCLPAY DSCFLGCGGQRVSETVCVENCPSAK >Mature_184_residues SFSNLLAALLLLAGVSGCATPRYQTTFRLIPPPDAAGRACVERCDATQAACQTTCKTRYEACAKAVAPQVEARYGEALEQ YALELKRYASALRRYEIRLHFDWMHSYPYRHYPPYWWDPWPGPYFPPPFAEPVMPTRESVRAELEKKQCEDDCGCLPAYD SCFLGCGGQRVSETVCVENCPSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20850; Mature: 20719
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 7.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSNLLAALLLLAGVSGCATPRYQTTFRLIPPPDAAGRACVERCDATQAACQTTCKTRY CCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH EACAKAVAPQVEARYGEALEQYALELKRYASALRRYEIRLHFDWMHSYPYRHYPPYWWDP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCCCCC WPGPYFPPPFAEPVMPTRESVRAELEKKQCEDDCGCLPAYDSCFLGCGGQRVSETVCVEN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCHHHHHCCCCHHHHHHHHHCC CPSAK CCCCC >Mature Secondary Structure SFSNLLAALLLLAGVSGCATPRYQTTFRLIPPPDAAGRACVERCDATQAACQTTCKTRY CHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH EACAKAVAPQVEARYGEALEQYALELKRYASALRRYEIRLHFDWMHSYPYRHYPPYWWDP HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCCCCCCCCCCCCC WPGPYFPPPFAEPVMPTRESVRAELEKKQCEDDCGCLPAYDSCFLGCGGQRVSETVCVEN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHCCCCCCCHHHHHCCCCHHHHHHHHHCC CPSAK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA