| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is ywoG [H]
Identifier: 74316692
GI number: 74316692
Start: 714616
End: 715800
Strand: Reverse
Name: ywoG [H]
Synonym: Tbd_0674
Alternate gene names: 74316692
Gene position: 715800-714616 (Counterclockwise)
Preceding gene: 74316699
Following gene: 74316691
Centisome position: 24.6
GC content: 67.85
Gene sequence:
>1185_bases ATGAAGTCCGCACGCCCCTCCTTCTTCGTCCTCATCGCGCTGGTCGGCGGTCTCGCGATCTTCAGCTCGACTCTGTCGAA GACACCGGTCCTGCCGCTGTTCGCCCAGGCACTCGACGCGACGCCTGCCGAAATCGGCTGGATCGTCATGGCCTCGACGA TCCCCGGCATCCTGATCAGCTACCCGGCAGGCGCGCTCTCGGACCAGCTCGGCAAGCGCCGCGTGCTGCTCGCCTCACTG GTCGTTTTCGCCACCGCGCCCTTTCTTTATCTGATCATCAGCACGGCCTGGCAACTCATGGCCGTCCGCTTCTACCACGG CTTCGCCACGGCAATCTTCGGCACCGTCGCGAGCGCCGCGATCGCCGAGCGCTACACGGCCGACCGCGCACAACGGCTGT CGACGTATTCCTCGGTCACGATCGTCGGCCGCTCGGTCGCGCCGTTTCTCGGCGGCACGCTGATCTCGCTCGGAAGCTTC GGCGCGGTCTACATCGCCTGCGCGATCAGCGGCGTCCTCGCGCTCGTCGTCGGCCTCGCGCTGCGCGACCATGCGCCTCC TGCCGCGACGAAGATCGAATTGCCGAAGTTCTGGACCAGCCTCGCCACGGTCCTCCGCGATCGCGGCATCATGCTCGTGA GCCTGGTCGAAGCCGCGCAATACCTCGTGTTCGGCGCGATCGAAGCCTTCCTCGCGCTCTTCGCGTCGTCGCTCGGCATC CCGGCATGGCAGATCGGCGTGATCCTCGGCGTGCAGCTCGTCAGCATCGTCTTCGCCAAGCCCATCGCGGGCAAAGTGTC CGACCGGCTCGGACGCCGCCGCGTGATTCTGCCCGGCCTCATGATCGGCGCGGCAAGCGTCGCGCTGCTGCCGTATTTCC CGAGCTTCGCGGGGCTGTCGGTGCTGAGCCTCGTCTTCGGCCTCGGCTTCGCCACCGTCACCTCGTCGACCGCAGCGCTC GTCGCGGACCTGACCCGCGACGGCCGCTACGGCTCGTCGATGGGCGTGCTGCGCACCATCATGGACGTCGGCCAGTCGAT CGGCCCCGTGCTCACGGGCTTCCTGGTCGGCGCCGCGGGCTACCCGAGCGCATTCACGCTATTGGCCGCCATCCTCGTCG CCGCCGCCGTCCTGCTCGGCATGCTGCTCAAGGGTGTGGATACGAAGGCGTCCGCGGCGCTATAG
Upstream 100 bases:
>100_bases CGTCTTCATCGCCCTCATCGTCGCGCCGCCGATTTCCGTGTCTGTTCGCATACCCTGCGTTTTCGCACTACAGTCGGGAA TAACACGCGCCCATCGTCCC
Downstream 100 bases:
>100_bases TGACCGGGCTATTCGCTCCCAAGGAGACCCCCATGCGCATTACTTCCCTGCTCGCCGCATTCGCATTCGCCGCCGGCCTC GGCGCGCCTGCCCTCGCCGA
Product: major facilitator superfamily protein
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKSARPSFFVLIALVGGLAIFSSTLSKTPVLPLFAQALDATPAEIGWIVMASTIPGILISYPAGALSDQLGKRRVLLASL VVFATAPFLYLIISTAWQLMAVRFYHGFATAIFGTVASAAIAERYTADRAQRLSTYSSVTIVGRSVAPFLGGTLISLGSF GAVYIACAISGVLALVVGLALRDHAPPAATKIELPKFWTSLATVLRDRGIMLVSLVEAAQYLVFGAIEAFLALFASSLGI PAWQIGVILGVQLVSIVFAKPIAGKVSDRLGRRRVILPGLMIGAASVALLPYFPSFAGLSVLSLVFGLGFATVTSSTAAL VADLTRDGRYGSSMGVLRTIMDVGQSIGPVLTGFLVGAAGYPSAFTLLAAILVAAAVLLGMLLKGVDTKASAAL
Sequences:
>Translated_394_residues MKSARPSFFVLIALVGGLAIFSSTLSKTPVLPLFAQALDATPAEIGWIVMASTIPGILISYPAGALSDQLGKRRVLLASL VVFATAPFLYLIISTAWQLMAVRFYHGFATAIFGTVASAAIAERYTADRAQRLSTYSSVTIVGRSVAPFLGGTLISLGSF GAVYIACAISGVLALVVGLALRDHAPPAATKIELPKFWTSLATVLRDRGIMLVSLVEAAQYLVFGAIEAFLALFASSLGI PAWQIGVILGVQLVSIVFAKPIAGKVSDRLGRRRVILPGLMIGAASVALLPYFPSFAGLSVLSLVFGLGFATVTSSTAAL VADLTRDGRYGSSMGVLRTIMDVGQSIGPVLTGFLVGAAGYPSAFTLLAAILVAAAVLLGMLLKGVDTKASAAL >Mature_394_residues MKSARPSFFVLIALVGGLAIFSSTLSKTPVLPLFAQALDATPAEIGWIVMASTIPGILISYPAGALSDQLGKRRVLLASL VVFATAPFLYLIISTAWQLMAVRFYHGFATAIFGTVASAAIAERYTADRAQRLSTYSSVTIVGRSVAPFLGGTLISLGSF GAVYIACAISGVLALVVGLALRDHAPPAATKIELPKFWTSLATVLRDRGIMLVSLVEAAQYLVFGAIEAFLALFASSLGI PAWQIGVILGVQLVSIVFAKPIAGKVSDRLGRRRVILPGLMIGAASVALLPYFPSFAGLSVLSLVFGLGFATVTSSTAAL VADLTRDGRYGSSMGVLRTIMDVGQSIGPVLTGFLVGAAGYPSAFTLLAAILVAAAVLLGMLLKGVDTKASAAL
Specific function: Efflux Pump Driven By The Proton Motive Force. Confers Resistance To Basic, Aromatic And Lipophilic Drugs As Well As Neutral, Non-Aromatic, Zwitterionic Or Nonaromatic Hydrophilic Antibiotics. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1787065, Length=383, Percent_Identity=26.8929503916449, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 40800; Mature: 40800
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSARPSFFVLIALVGGLAIFSSTLSKTPVLPLFAQALDATPAEIGWIVMASTIPGILIS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHEEEHHHCCCCEEE YPAGALSDQLGKRRVLLASLVVFATAPFLYLIISTAWQLMAVRFYHGFATAIFGTVASAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAERYTADRAQRLSTYSSVTIVGRSVAPFLGGTLISLGSFGAVYIACAISGVLALVVGLA HHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LRDHAPPAATKIELPKFWTSLATVLRDRGIMLVSLVEAAQYLVFGAIEAFLALFASSLGI HHCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAWQIGVILGVQLVSIVFAKPIAGKVSDRLGRRRVILPGLMIGAASVALLPYFPSFAGLS CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCHHHHH VLSLVFGLGFATVTSSTAALVADLTRDGRYGSSMGVLRTIMDVGQSIGPVLTGFLVGAAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC YPSAFTLLAAILVAAAVLLGMLLKGVDTKASAAL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MKSARPSFFVLIALVGGLAIFSSTLSKTPVLPLFAQALDATPAEIGWIVMASTIPGILIS CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHEEEHHHCCCCEEE YPAGALSDQLGKRRVLLASLVVFATAPFLYLIISTAWQLMAVRFYHGFATAIFGTVASAA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAERYTADRAQRLSTYSSVTIVGRSVAPFLGGTLISLGSFGAVYIACAISGVLALVVGLA HHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LRDHAPPAATKIELPKFWTSLATVLRDRGIMLVSLVEAAQYLVFGAIEAFLALFASSLGI HHCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PAWQIGVILGVQLVSIVFAKPIAGKVSDRLGRRRVILPGLMIGAASVALLPYFPSFAGLS CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCHHHHH VLSLVFGLGFATVTSSTAALVADLTRDGRYGSSMGVLRTIMDVGQSIGPVLTGFLVGAAG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC YPSAFTLLAAILVAAAVLLGMLLKGVDTKASAAL CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]