| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316700
Identifier: 74316700
GI number: 74316700
Start: 722401
End: 723285
Strand: Reverse
Name: 74316700
Synonym: Tbd_0682
Alternate gene names: NA
Gene position: 723285-722401 (Counterclockwise)
Preceding gene: 74316702
Following gene: 74316699
Centisome position: 24.86
GC content: 65.88
Gene sequence:
>885_bases ATGAAGCACCCCGCCCCGCGCGCCGACCGCGCCCAGAAAACCGTCTTCTCCGACCCGCTGGCCGAGGTGTTACGCCCCGG ACAGTCGGTCGAGCTCCTGAAGGAGTTGCACATCCTGACGCGCGATGGCCGGCTCAACCAGGACAGCCGGCGCAAGCTCA AGCAGGTCTATCACCTGTGCCACTTCATCGAACCGCTGCTCGACGAGGTGCTCGACCGCCAGGGTAGGCTCACGCTCGCC GACCACGGCGCGGGCAAGTCCTACCTCGGCTTCATCCTCTACGACCTCTACCTCAAGGAGCGCGAGGGCGCCCACATTTT CGGCATCGAGACGCGCGACGAACTCGTCGAAAAATCGCGCGCGCTCGCCGCGCGCCTCGGCTTTCCGCGCATGTCCTTCC TCGACGTGACGGTCGCCGAATCGATCGGCTCGGCGCAACTGCCGCCGACCGTCGACATCGTCACCGCGCTCCACGCCTGC AATACCGCGACCGACGACGCGATCCAGTTCGCGCTCGCGAAAAAGGCGCGCCACATCGTGCTCGTGCCGTGTTGCCAGGC CGAGGTCGCGGCGGTCCTGCGCAAGAACAAGAACGCGTCGTTCGGCAAGACGCCGCTCTCCGAGATCTGGCGCCACCCCC TCCACACCCGCGAGTTCGGCAGCCATCTCACCAACGTGCTGCGCTGCCTGCAGCTCGAATCGCACGGCTACCAGGTCACG GTCACCGAGCTGGTCGGTTGGGAACATTCGCTGAAGAACGAACTGATCGTCGCGACGCACACCGGCGCCGCGCCGAGAAA CGCGGCGGAACGCCTGCGCGCGATCCTGCAGAAACTCAACCTGCAGGAACTCGAAGCCCGTTTCCTGAAGACGCCGCCCG AATAA
Upstream 100 bases:
>100_bases AGGGCGGCATTATCGCGGAAAGCGCCCCGCGCCGGAAAAGGCGCCTCGCGCACGCCCGCTTTTTGTTACGCTCTGCCGCT TCGCCCATCGACTTTCCGCC
Downstream 100 bases:
>100_bases AAACGGCCTATGCTGGGAGCAAAGCGAGCCGCGAACGGATGGAGCGATGCGCGTGTCTTTTTCGAACCTGCTGGCTGCCC TGCTCCTCCTCGCGGGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; SAM Dependent Methyltransferase; Sam-Dependent Methyltransferase; Conserved Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MKHPAPRADRAQKTVFSDPLAEVLRPGQSVELLKELHILTRDGRLNQDSRRKLKQVYHLCHFIEPLLDEVLDRQGRLTLA DHGAGKSYLGFILYDLYLKEREGAHIFGIETRDELVEKSRALAARLGFPRMSFLDVTVAESIGSAQLPPTVDIVTALHAC NTATDDAIQFALAKKARHIVLVPCCQAEVAAVLRKNKNASFGKTPLSEIWRHPLHTREFGSHLTNVLRCLQLESHGYQVT VTELVGWEHSLKNELIVATHTGAAPRNAAERLRAILQKLNLQELEARFLKTPPE
Sequences:
>Translated_294_residues MKHPAPRADRAQKTVFSDPLAEVLRPGQSVELLKELHILTRDGRLNQDSRRKLKQVYHLCHFIEPLLDEVLDRQGRLTLA DHGAGKSYLGFILYDLYLKEREGAHIFGIETRDELVEKSRALAARLGFPRMSFLDVTVAESIGSAQLPPTVDIVTALHAC NTATDDAIQFALAKKARHIVLVPCCQAEVAAVLRKNKNASFGKTPLSEIWRHPLHTREFGSHLTNVLRCLQLESHGYQVT VTELVGWEHSLKNELIVATHTGAAPRNAAERLRAILQKLNLQELEARFLKTPPE >Mature_294_residues MKHPAPRADRAQKTVFSDPLAEVLRPGQSVELLKELHILTRDGRLNQDSRRKLKQVYHLCHFIEPLLDEVLDRQGRLTLA DHGAGKSYLGFILYDLYLKEREGAHIFGIETRDELVEKSRALAARLGFPRMSFLDVTVAESIGSAQLPPTVDIVTALHAC NTATDDAIQFALAKKARHIVLVPCCQAEVAAVLRKNKNASFGKTPLSEIWRHPLHTREFGSHLTNVLRCLQLESHGYQVT VTELVGWEHSLKNELIVATHTGAAPRNAAERLRAILQKLNLQELEARFLKTPPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32999; Mature: 32999
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPAPRADRAQKTVFSDPLAEVLRPGQSVELLKELHILTRDGRLNQDSRRKLKQVYHLC CCCCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH HFIEPLLDEVLDRQGRLTLADHGAGKSYLGFILYDLYLKEREGAHIFGIETRDELVEKSR HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH ALAARLGFPRMSFLDVTVAESIGSAQLPPTVDIVTALHACNTATDDAIQFALAKKARHIV HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE LVPCCQAEVAAVLRKNKNASFGKTPLSEIWRHPLHTREFGSHLTNVLRCLQLESHGYQVT EEECCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE VTELVGWEHSLKNELIVATHTGAAPRNAAERLRAILQKLNLQELEARFLKTPPE HHHHHCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MKHPAPRADRAQKTVFSDPLAEVLRPGQSVELLKELHILTRDGRLNQDSRRKLKQVYHLC CCCCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH HFIEPLLDEVLDRQGRLTLADHGAGKSYLGFILYDLYLKEREGAHIFGIETRDELVEKSR HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHH ALAARLGFPRMSFLDVTVAESIGSAQLPPTVDIVTALHACNTATDDAIQFALAKKARHIV HHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEE LVPCCQAEVAAVLRKNKNASFGKTPLSEIWRHPLHTREFGSHLTNVLRCLQLESHGYQVT EEECCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEE VTELVGWEHSLKNELIVATHTGAAPRNAAERLRAILQKLNLQELEARFLKTPPE HHHHHCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA