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The map label for this gene is sodC [H]

Identifier: 74316677

GI number: 74316677

Start: 699332

End: 699856

Strand: Reverse

Name: sodC [H]

Synonym: Tbd_0659

Alternate gene names: 74316677

Gene position: 699856-699332 (Counterclockwise)

Preceding gene: 74316679

Following gene: 74316675

Centisome position: 24.05

GC content: 69.14

Gene sequence:

>525_bases
ATGACAATCAGGTCGAAGATGTGCGCGCTGGCGCTGTGTTTCGTTCCGTTCGCGGCGGGCGCCGCCGACAAGACCGTCGC
GATGGACAGCGTCGACGCCGCGGGCAAGGGGACGTCGGTCGGTTCGGTGACGATCAGCGAATCGCGTTATGGCCTGGTCT
TCACGCCGGCGCTCAAAGGGCTCTCGCCCGGCGTACACGGGTTCCACGTTCACGAGAAGCCGAGCTGCGAGGCGCAGGAA
AAAGACGGCAAGAAGGTCGCGGCGCTCGCAGCCGGTGGTCACTACGACCCCGCGAAGACCGGCCGCCACGGCACGCCCTG
GGGCGACGGTCACCTCGGCGACCTGCCGCCGCTTTTCGTCGACGCGAACGGCGACACCAGCCAGCCTGTGCTCGCACCGC
GGCTGAAGATGAGCGATCTACGCGGCCGCTCGCTCATGGTTCACGCGGGCGGCGACAACCACGCCGACCATCCCGCCGCG
CTCGGCGGCGGCGGTGCGCGTGTCGCCTGCGGCGTGATCGACTGA

Upstream 100 bases:

>100_bases
CCCGGCGCGCTTGCCACGCCGGCGGCTTCGCCTACGCTTTGAGAAGGCCGGCGGCCCGGTTGCCGACCGGCAGCCTGTAA
CCCATCAACAAGGAGAAGAC

Downstream 100 bases:

>100_bases
AAGACGATGCGCGGCGCGCGTCAGAAGGGCTGCGGCGCCTCGAACCGCATCCATTCCCCGGTCGCCGGGTGAGCGAGGCC
GAGCGAGCGGGCATGCAGGA

Product: superoxide dismutase, Cu-Zn

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTIRSKMCALALCFVPFAAGAADKTVAMDSVDAAGKGTSVGSVTISESRYGLVFTPALKGLSPGVHGFHVHEKPSCEAQE
KDGKKVAALAAGGHYDPAKTGRHGTPWGDGHLGDLPPLFVDANGDTSQPVLAPRLKMSDLRGRSLMVHAGGDNHADHPAA
LGGGGARVACGVID

Sequences:

>Translated_174_residues
MTIRSKMCALALCFVPFAAGAADKTVAMDSVDAAGKGTSVGSVTISESRYGLVFTPALKGLSPGVHGFHVHEKPSCEAQE
KDGKKVAALAAGGHYDPAKTGRHGTPWGDGHLGDLPPLFVDANGDTSQPVLAPRLKMSDLRGRSLMVHAGGDNHADHPAA
LGGGGARVACGVID
>Mature_173_residues
TIRSKMCALALCFVPFAAGAADKTVAMDSVDAAGKGTSVGSVTISESRYGLVFTPALKGLSPGVHGFHVHEKPSCEAQEK
DGKKVAALAAGGHYDPAKTGRHGTPWGDGHLGDLPPLFVDANGDTSQPVLAPRLKMSDLRGRSLMVHAGGDNHADHPAAL
GGGGARVACGVID

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

Organism=Escherichia coli, GI1787934, Length=171, Percent_Identity=53.2163742690059, Blast_Score=171, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17554806, Length=142, Percent_Identity=33.8028169014084, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17720; Mature: 17589

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS00087 SOD_CU_ZN_1 ; PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRSKMCALALCFVPFAAGAADKTVAMDSVDAAGKGTSVGSVTISESRYGLVFTPALKG
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEECCCCCC
LSPGVHGFHVHEKPSCEAQEKDGKKVAALAAGGHYDPAKTGRHGTPWGDGHLGDLPPLFV
CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
DANGDTSQPVLAPRLKMSDLRGRSLMVHAGGDNHADHPAALGGGGARVACGVID
ECCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCEEEEEECC
>Mature Secondary Structure 
TIRSKMCALALCFVPFAAGAADKTVAMDSVDAAGKGTSVGSVTISESRYGLVFTPALKG
CCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCEEECCCCCC
LSPGVHGFHVHEKPSCEAQEKDGKKVAALAAGGHYDPAKTGRHGTPWGDGHLGDLPPLFV
CCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
DANGDTSQPVLAPRLKMSDLRGRSLMVHAGGDNHADHPAALGGGGARVACGVID
ECCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8945543; 1741300; 7496539; 10656823 [H]