| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74316679
Identifier: 74316679
GI number: 74316679
Start: 701770
End: 702315
Strand: Reverse
Name: 74316679
Synonym: Tbd_0661
Alternate gene names: NA
Gene position: 702315-701770 (Counterclockwise)
Preceding gene: 74316680
Following gene: 74316677
Centisome position: 24.14
GC content: 69.23
Gene sequence:
>546_bases ATGCCGAGCTTCCCCATGACTCCCCGAGCCCTCCGATCCGCGCCGCAACTGCGTTCGCTCGCCCGCATGCTCGCTGCCGG CGTCGCCCTCCTCCTGCTCAGTCACGCGACGCCTGCCGCGACGCTCGAAGGGCTGCTGGCCCAGCCGAACGCACCGGCAG GCGTCGTGTTCGAAGTCGTCGACCGCGATCCGCGCGCCCTGGAATACGCGCTCCCCTGGGTGAAGCAGGCGGCGAGGCGC CTGAAGGCGCGCTTTCCGGCGCTGCCGATGGCGCTAGTCACGCACGGTCAGGAAATGTTCGCGCTGAAGGATGGCGCGCG CGGAACGAACCCGGCGATCCATCAACTCGCCGAAAGCCTGAGCCGCGACGACGGGATTCCGGTACACGTCTGCGAGACCT ACGCTGGGACGCGCGGTCTCGGCGCGGAGGATTTTCCGGCCTACGTCGACGTCGCGCCCGAAGGTCCGGCGCAGATCCGC AACTACGAAGCGCTCGACTACGTCAGGCTCGTCGTTCCACGGGCGGCGACGCTGAAGCCGCGCTGA
Upstream 100 bases:
>100_bases ACCTCATCGGCGGGATCAACCTCATCGAAATCCTGCTCGACAAGAACGCCTTCCCGCGCTACCTGGCAGGCCGGTAGCGG CAACCCGAGACCGTCACCCG
Downstream 100 bases:
>100_bases GACCTCGCCGCCGCGTGCAGCGGCCCGGAGATTTACAGCGGTCGCGCCTTCAGCGGGCGACGAGCGCGAGCCTGGGCGCG CGGGCCTTGGCCACCTGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MPSFPMTPRALRSAPQLRSLARMLAAGVALLLLSHATPAATLEGLLAQPNAPAGVVFEVVDRDPRALEYALPWVKQAARR LKARFPALPMALVTHGQEMFALKDGARGTNPAIHQLAESLSRDDGIPVHVCETYAGTRGLGAEDFPAYVDVAPEGPAQIR NYEALDYVRLVVPRAATLKPR
Sequences:
>Translated_181_residues MPSFPMTPRALRSAPQLRSLARMLAAGVALLLLSHATPAATLEGLLAQPNAPAGVVFEVVDRDPRALEYALPWVKQAARR LKARFPALPMALVTHGQEMFALKDGARGTNPAIHQLAESLSRDDGIPVHVCETYAGTRGLGAEDFPAYVDVAPEGPAQIR NYEALDYVRLVVPRAATLKPR >Mature_180_residues PSFPMTPRALRSAPQLRSLARMLAAGVALLLLSHATPAATLEGLLAQPNAPAGVVFEVVDRDPRALEYALPWVKQAARRL KARFPALPMALVTHGQEMFALKDGARGTNPAIHQLAESLSRDDGIPVHVCETYAGTRGLGAEDFPAYVDVAPEGPAQIRN YEALDYVRLVVPRAATLKPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19510; Mature: 19379
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFPMTPRALRSAPQLRSLARMLAAGVALLLLSHATPAATLEGLLAQPNAPAGVVFEVV CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEHCC DRDPRALEYALPWVKQAARRLKARFPALPMALVTHGQEMFALKDGARGTNPAIHQLAESL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHH SRDDGIPVHVCETYAGTRGLGAEDFPAYVDVAPEGPAQIRNYEALDYVRLVVPRAATLKP CCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCC R C >Mature Secondary Structure PSFPMTPRALRSAPQLRSLARMLAAGVALLLLSHATPAATLEGLLAQPNAPAGVVFEVV CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEHCC DRDPRALEYALPWVKQAARRLKARFPALPMALVTHGQEMFALKDGARGTNPAIHQLAESL CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHH SRDDGIPVHVCETYAGTRGLGAEDFPAYVDVAPEGPAQIRNYEALDYVRLVVPRAATLKP CCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHHHCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA